Reid, A.J., A.K. Carlson, I.F. Creed, E.J. Eliason, P.A. Gell, P.T.J. Johnson, K.A. Kidd, T.J. MacCormack, J.D. Olden, S.J. Ormerod, J.P. Smol, W.W. Taylor, K. Tockner, J.C. Vermaire, D. Dudgeon and S.J. Cooke. In Press. Emerging threats and persistent conservation challenges for freshwater biodiversity. Biological Reviews. 00:000-000.
Lapointe D, Cooperman MS, Chapman LJ, Clark TD, Val AL, Ferreira MS, Balirwa J, Mbabazi D, Mwanja M, Chhom L, Hannah L, Kaufman L, Farrell AP, Cooke SJ. In Press. Predicted impacts of climate warming on aerobic performance and upper thermal tolerance of six tropical freshwater fishes spanning three continents. Conservation Physiology 00 :000.
Rytwinski T, Taylor JJ, Donaldson LA, Britton JR, Browne D, Gresswell RE, Lintermans M, Prior K, Pellatt MG, Vis C, Cooke SJ. The effectiveness of non-native fish removal techniques in freshwater ecosystems: a systematic review. Environmental Reviews. DOI 10.1139/er-2018-004.
Brownscombe JW, AJ Danylchuk, AJ Adams, B Black, R Boucek, M Power, JS Rehage, RO Santos, RW Fisher, B Horn, CR Haak, S Morton, J Hunt, R Ahrens, MS Allen, J Shenker, SJ Cooke. In Press. Bonefish in South Florida: status, threats and research needs. Environmental Biology of Fishes. 00:000
Cook, K.V., Reid A.J., Patterson, D.A., Robinson, K.A., Chapman, J.M., Hinch, S.G., Cooke, S.J. In Press. A synthesis to understand responses to capture stressors among fish discarded from commercial fisheries and options for mitigating their severity. Fish and Fisheries. 00:000-000.
Bower, S.D., Song, A.M., Onyango, P., Cooke, S.J., Kolding, J. In Press. Using transdisciplinary research to support governance in inland fisheries. MARE Publication Series, Vol. 21, Chuenpagdee, R and Jentoft, S. (Eds): Transdisciplinarity for Small-Scale Fisheries Governance, 978-3-319-94937-6, 466764_1_En.
Lennox RJ, Økland F, Mitamura H, Cooke SJ, Thorstad EB. In Press. European eel Anguilla anguilla compromise speed for safety in the early marine spawning migration. ICES Journal of Marine Science 00:00-00.
Lennox RJ, Eliason EJ, Havn TB, Johansen MR, Thorstad EB, Cooke SJ, Diserud OH, Whoriskey FG, Farrell AP, and Uglem I. In Press. Bioenergetic consequences of warming rivers to adult Atlantic salmon during their spawning migration. Freshwater Biology 00:000-000.
Struthers, D.P., Bower, S.D., Lennox, R.J., Gilroy, C., MacDonald, B., Cooke, S.J., and Litvak, M.K. In Press. Short-term physiological disruption and reflex impairment in Shortnose Sturgeon Acipenser brevirostrum exposed to catch-and-release angling. North American Journal of Fisheries Management. 00:00-00.
Lennox RJ, Thorstad EB, Diserud OH, Økland F, Cooke SJ, Aasestad I, Forseth T. 2018. Biotic and abiotic determinants of the ascent behaviour of adult Atlantic salmon transiting passable waterfalls. River Research and Applications 00:00-00.
Murchie, K.J., C.R. Haak, M. Power, O.N. Shipley, A.J. Danylchuk and S.J. Cooke. In Press. Ontogenetic patterns in resource use dynamics of bonefish (Albula vulpes) in The Bahamas. Environmental Biology of Fishes. 00:000-000.
Brooks, J.L., J.M. Chapman, A.N. Barkley, S.T. Kessel, N.E. Hussey, S.G. Hinch, D.A. Patterson, K.J. Hedges, S.J. Cooke, A.T. Fisk, S.H. Gruber and V.M. Nguyen. In Press. Biotelemetry informing management: case studies exploring successful integration of biotelemetry data into fisheries and habitat management. Canadian Journal of Fisheries and Aquatic Sciences. 00:000-000.
Hansen, M.J., D.E. Cocherell, S.J. Cooke, P.H. Patrick, M. Sills and N.A. Fangue. In Press. Behavioural guidance of Chinook salmon smolts: the variable effects of LED spectral wavelength and strobing frequency. Conservation Physiology. 00:000-000.
Brownscombe, J.W., R. Lennox, A.J. Danylchuk and S.J. Cooke. 2018. Estimating fish swimming metrics and metabolic rates with accelerometers: The influence of sampling frequency. Journal of Fish Biology. 00:000-000.
Lennox RJ, Gallagher AJ, Ritchie EG, Cooke SJ. 2018. Evaluating the efficacy of predator removal in a conflict-prone world. Biological Conservation 00: 00-00.
Guckian, M.L., A.J. Danylchuk, S.J. Cooke and E.M. Markowitz. In Press. Peer pressure on the riverbank: Assessing catch-and-release anglers’ willingness to sanction others’ (bad) behavior. Journal of Environmental Management. 00:000-000.
Raby, G.D., J. Sundin, F. Jutfelt, S.J. Cooke and T.D. Clark. In Press. Exposure to elevated carbon dioxide does not impair short-term swimming behaviour or shelter-seeking in a predatory coral reef fish. Journal of Fish Biology. 00:000-000.
Hlevca, B., Wells, M.G., Cruz Font, L., Cooke, S.J., Doka, S.E., Portiss, R., St. John, M. In Press. Water circulation in Toronto Harbour. Aquatic Ecosystem Health and Management. 00:000-000.
Raby, G.D., J. Sundin, F. Jutfelt, S.J. Cooke and T.D. Clark. In Press. Exposure to elevated carbon dioxide does not impair short-term swimming behaviour or shelter-seeking in a predatory coral reef fish. Journal of Fish Biology. 00:000-000.
Jain-Schlaepfer, S.M.R., J.D. Midwood, M.H. Larsen, K. Aarestrup, G.D. King, C.D. Suski and S.J. Cooke. In Press. Relationship of baseline and maximum glucocorticoid concentrations to migration propensity – a field test with wild sub-adult brown trout (Salmo trutta). Canadian Journal of Zoology. 00:000-000.
Costa, M.J., I. Boavida, V. Almeida, S. J. Cooke, M.T. Ferreira and A. Pinheiro. In Press. Do artificial velocity refuges mitigate the physiological and behavioural consequences of hydropeaking on a freshwater Iberian cyprinid? Ecohydrology. 00:000-000.
Lennox, R.J., C. Engler-Palma, K. Kowarski, A. Filous, R. Whitlock, S.J. Cooke and M. Auger-Méthé. In Press. Optimizing marine spatial plans with animal tracking data. Canadian Journal of Fisheries and Aquatic Sciences. 00:000-000.
Nguyen, V.M., N. Young, M. Corriveau, S.G. Hinch and S.J. Cooke. In Press. What is ‘usable’ knowledge? Perceived barriers for integrating new knowledge into management of an iconic Canadian fishery. Canadian Journal of Fisheries and Aquatic Sciences. 00:000-000.
Bass, A.L., S.G. Hinch, D.A. Patterson, S.J. Cooke and A.P. Farrell. In Press. Location-specific consequences of beach seine and gillnet capture on upriver-migrating sockeye salmon migration behavior and fate. Canadian Journal of Fisheries and Aquatic Sciences. 00:000-000.
Veilleux, M.A.N., J.D. Midwood, C.M. Boston, N.W.R. Lapointe, R. Portiss, M.G. Wells, S.E. Doka, and S.J. Cooke. In Press. Assessing occupancy of freshwater fishes in urban boat slips of Toronto Harbour. Aquatic Ecosystem Health and Management. 00:000-000.
Krueger, C.C., C.M. Holbrook, T.R. Binder, C.S. Vandergoot, T.A. Hayden, D.W. Hondorp, N. Nate, K. Paige, S.C. Riley, A.T. Fisk and S.J. Cooke. In Press. Acoustic Telemetry Observation Systems: challenges encountered and overcome in the Laurentian Great Lakes. Canadian Journal of Fisheries and Aquatic Sciences. 00:000-000.
Madenjian, C.P., T.A. Hayden, T.B. Peat, C.S. Vandergoot, D.G. Fielder, A-M. Gorman, S.A. Pothoven, J.M. Dettmers, S.J. Cooke, Y. Zhao and C.C. Krueger. In Press. Temperature regimes, growth, and food consumption for female and male adult walleye in Lake Huron and Lake Erie: a bioenergetics analysis. Canadian Journal of Fisheries and Aquatic Sciences. 00:000-000.
Drenner, S.M., S. G. Hinch, N. B. Furey, T. D. Clark, S. Li, T. Ming, K. M. Jeffries, D. A. Patterson, S. J. Cooke, D. Robichaud, D. W. Welch, A P. Farrell, and K.M. Miller. In Press. Transcriptome patterns and blood physiology associated with homing success of sockeye salmon during their final stage of marine migration. Canadian Journal of Fisheries and Aquatic Sciences. 00:000-000.
Nguyen, V.M., N. Young and S.J. Cooke. In Press. Applying a knowledge-action framework for navigating barriers to incorporating telemetry science into fisheries management and conservation: a qualitative study. Canadian Journal of Fisheries and Aquatic Sciences. 00:000-000.
Midwood, J.D., D. Reddick, J. Brooks, C. Boston, S.E. Doka and S.J. Cooke. 2018. Intracoelomic implantation in Longnose gar (Lepisosteus osseus). Transactions of the American Fisheries Society. 147:704-710.
Shipley, O.N., J.W. Brownscombe, A.J. Danylchuk, S.J. Cooke, O.R. O’Shea and E.J. Brooks. 2018. Fine-scale movement and activity patterns of Caribbean reef sharks (Carcharhinus perezi) in The Bahamas. Environmental Biology of Fishes. 101:1097-1104.
Maxwell, R.J., A. J. Zolderdo, R. de Bruijn, J.W. Brownscombe, E. Staaterman, A.J. Gallagher and S. J. Cooke. 2018. Does motor noise from recreational boats alter parental care behaviour of a nesting freshwater fish? Aquatic Conservation. 28:969-978.
Hollins, J., D. Thambithurai, B. Köeck, A. Crespel, D.M. Bailey, S.J. Cooke, J. Lindström, K.J. Parsons and S.S. Killen. 2018. A physiological perspective on fisheries-induced evolution. Evolutionary Applications. 11:561-576.
Jerome, J.M., A.J. Gallagher, S.J. Cooke and N. Hammerschlag. 2018. Integrating reflexes with physiological measures to evaluate coastal shark stress response to capture. ICES Journal of Marine Science. 75(2):796-804.
Bower, S.D., Brownscombe, J.W., Birnie-Gauvin, K., Ford, M., Moraga, A.D., Pusiak, R.J.P., Turenne, E., Zolderdo, A.J., Cooke, S.J., and J.R. Bennett. 2018. Making tough choices: Picking the appropriate conservation decision-making tool. Conservation Letters. 11(2):1-7.
Lawrence, M.J., S. Jain-Schlaepfer, A.J. Zolderdo, D.A. Algera, K.M. Gilmour, A.J. Gallagher and S.J. Cooke. 2018. Are 3-minutes good enough for obtaining baseline physiological samples from teleost fish? Canadian Journal of Zoology. 96:774-786.
Xia, J., C.K. Elvidge and S.J. Cooke. 2018. Niche separation, ontogeny, and heterospecific alarm responses in centrarchid sunfish. Behavioral Ecology 29(4):862-868.
Lennox RJ, Brownscombe JW, Cooke SJ, Danylchuk AJ. 2018. Post-release behaviour and survival of recreationally-angled arapaima (Arapaima cf. arapaima) assessed with accelerometer biologgers. Fisheries Research 207:197-203.
Danylchuk, A.J., S.C. Danylchuk, A. Kosiarski, S.J. Cooke and B. Huskey. 2018. Keepemwet Fishing – An emerging social brand for disseminating best practices for catch-and-release in recreational fisheries. Fisheries Research. 205:52-56.
Lawrence, M.J., Godin, J.G.J, and Cooke, S.J. 2018. Does experimental cortisol elevation mediate risk-taking and antipredator behaviour in a wild teleost fish? Comparative Biochemistry and Physiology: part A. 226: 75-82.
Browman, H.I., S.J. Cooke, I.G. Cowx, S.W.G. Derbyshire, A. Kasumyan, B. Key, J.D. Rose, A. Schwab, A. Berit Skiftesvik, E.D. Stevens, C.A. Watson and R. Arlinghaus. 2018. Welfare of aquatic animals: Where things are, where they are going, and what it means for research, aquaculture, recreational angling, and commercial fishing. ICES Journal of Marine Science. DOI 10.1093/icesjms/fsyo67.
Lennox, R.J., W.M. Twardek and S.J. Cooke. 2018. Observations of Mudpuppy (Necturus maculosus) bycatch in a recreational ice fishery in northern Ontario. Canadian Field-Naturalist. 132(1):61-66.
Eales, J., N.R. Haddaway, C. Bernes, S.J. Cooke, B. Gunnar Jonsson, J. Kouki, G. Petrokofsky and J.J. Taylor. 2018. What is the effect of prescribed burning in temperate and boreal forest on biodiversity, beyond tree regeneration, pyrophilous and saproxylic species? A systematic review. Environmental Evidence. 7:19. DOI 10.1186/s13750-018-0131-5.
Funge-Smith, S., D. Beard, S. Cooke and I. Cowx. 2018. Recreational fisheries in inland waters. Pages 272-283 in S.J. Funge-Smith, Editor. Review of the state of world fishery resources: inland fisheries. FAO Fisheries and Aquaculture Circular No. C942 Rev.3, Rome. 397 pp.
Madliger, C.L., K.R. Hultine, O.P. Love and S.J. Cooke. 2018. The conservation physiology toolbox: status and opportunities. Conservation Physiology. 6(1): doi: 10.1093/conphys/coy029.
Silva, A.T., J.D. Midwood, K. Aarestrup, T.G. Pottinger, S.S. Madsen and S.J. Cooke. 2018. The influence of sex, parasitism, and ontogeny on the physiology response of European eel (Anguilla anguilla) to an abiotic stressor. Physiological and Biochemical Zoology. 91(4):980-986.
Twardek, W.M., T.O. Gagne, L.K. Elmer, S.J. Cooke, M.C. Beere and A.J. Danylchuk. 2018. Consequences of catch-and-release angling on the physiology, behaviour and survival of wild steelhead in the Bulkley River, British Columbia. Fisheries Research. 206: 235-246.
Cook, K. V., Hinch, S. G., Watson, M. S., Patterson, D. A., Reid, A. J., & Cooke, S. J. 2018. Experimental capture and handling of chum salmon reveal thresholds in injury, impairment, and physiology: Best practices to improve bycatch survival in a purse seine fishery. Fisheries Research. 206: 96-108.
Raby, G.D., V. Messmer, A.J. Tobin, A.S. Hoey, F. Jutfelt, J. Sundin, S.J. Cooke and T.D. Clark. 2018. Swim for it: effects of simulated fisheries capture on the post-release behaviour of four Great Barrier Reef fishes. Fisheries Research. 206:129-137.
Griffin, L.P., J.W. Brownscombe, A.J. Adams, R.E. Boucek, J.T. Finn, M.R. Heithaus, J.S. Rehage, S.J. Cooke and A.J. Danylchuk. 2018. Keeping up with the Silver King: Using cooperative acoustic telemetry networks to quantify the movements of Atlantic tarpon (Megalops atlanticus) in the coastal waters of the southeastern United States. Fisheries Research. 205:65-76.
Song, A.M., S.D. Bower, P. Onyango, S.J. Cooke, S. Akintola, J. Baer, T. Gurung, M. Hettiarachchi, M.M. Islam, W. Mhlanga, F. Nunan, P. Salmi, V. Singh, X. Tezzo, S. Funge-Smith, P. Nayak and R. Chuenpagdee. 2018. Inter-sectorality in the governance of inland fisheries. Ecology and Society 23 (2):17. [online] URL: https://www.ecologyandsociety.
Loury, E., S.M. Ainsley, S. Bower, R. Chuenpagdee, T. Farrell, A.G. Guthrie, S. Heng, Z. Lunn, A. Al Mamun, R. Oyanedel, S. Rocliffe, S. Satumanatpan and S.J. Cooke. 2018. Salty stories, fresh spaces: Lessons for aquatic protected areas from marine and freshwater experiences. Aquatic Conservation. 28:485–500.
Lizee TW, Lennox RJ, Ward TD, Brownscombe JW, Chapman JM, Danylchuk AJ, Nowell LB, Cooke SJ. 2018. Influence of landing net mesh type on handling time and tissue damage of angled brook trout. North American Journal of Fisheries Management 38: 76-83.
Twardek, W.M., R.J. Lennox, M.J. Lawrence , J.M. Logan, P. Szekeres, K. Tremblay, G.E. Morgan, A.J. Danylchuk, and S.J. Cooke. 2018. The post-release survival of Walleye Sander vitreus following ice angling on Lake Nipissing, Ontario. North American Journal of Fisheries Management 38: 159-169.
Dick, M., E.J. Eliason, D.A. Patterson, K.A. Robinson, S.J. Cooke, S.G. Hinch. 2018. Short-term physiological response profiles of tagged migrating adult sockeye salmon: a comparison of gastric and external tagging methods. Transactions of the American Fisheries Society. 147:300-315.
Abrams, A. E. I., A. M. Rous, J. L. Brooks, M. J. Lawrence, S. E. Doka, J. D. Midwood, and S. J. Cooke. 2018. Comparing immobilization, recovery, and stress indicators associated with electric fish handling gloves and a portable electrosedation system. Transactions of the American Fisheries Society. 147:390-399.
Lawrence, M.J., E.J. Eliason, J.W. Brownscombe, K.M. Gilmour, J.W. Mandelman, L.F.G. Gutowsky and S.J. Cooke. 2018. Influence of supraphysiological cortisol manipulation on predator avoidance behaviours and physiological responses to a predation threat in a wild marine teleost fish. Integrative Zoology. 13:206-218.
Stoot, L.J., D.P. Gibson, S.J. Cooke and M. Power. 2018. Assessing the potential for using low frequency electric deterrent barriers to reduce lake sturgeon (Acipenser fluvescens) entrainment. Hydrobiologia. 813:223-235.
Tomlinson, S., J.L. Rummer, K.R. Hultine and S.J. Cooke. 2018. Crossing boundaries in conservation physiology. Conservation Physiology (Editorial). 6:1-5.
Raymond, C.V., L. Wen, S.J. Cooke and J.R. Bennett. 2018. National attention to endangered wildlife is not affected by global endangerment: A case study of Canada’s species at risk program. Environmental Science and Policy. 84:74-79.
Elvidge, C.K., M.I. Ford, T.C. Pratt, K.E. Smokorowski, M. Sills, P.H. Patrick and S.J. Cooke. 2018. Behavioural guidance of yellow-stage American eel Anguillla rostrata with a light-emitting diode (LED) device. Endangered Species Research. 35:159-168.
Ford, M.I., C.K. Elvidge, D. Baker, T.C. Pratt, K.E. Smokorowski, M. Sills, P. Patrick and S.J. Cooke. 2018. Preferences of age-0 white sturgeon for different colours and strobe rates of LED lights may inform behavioural guidance strategies. Environmental Biology of Fishes. 101:667-674.
Lennox RJ, Suski CD, Cooke SJ. 2018. A macrophysiology approach to watershed science and management. Science of the Total Environment 626:434-440.
Cooke, S.J., A.M. Rous, L.A. Donaldson, J.J. Taylor, T. Rytwinski, K.A. Prior, K.E. Smokorowski and J.R. Bennett. 2018. Evidence-based restoration in the Anthropocene – From acting with purpose to acting for impact. Restoration Ecology. 26(2):201-205.
Raby, G.D., C.S. Vandergoot, T.A. Hayden, M.D. Faust, R.T. Kraus, J.M. Dettmers, S.J. Cooke, Y. Zhao, A.T. Fisk and C.C. Krueger. 2018. Does behavioural thermoregulation underlie seasonal movements in Lake Erie walleye? Canadian Journal of Fisheries and Aquatic Sciences. 75:488-496.
Birnie-Gauvin, K., K.S. Peiman, M.H. Larsen, K. Aarestrup, K.M. Gilmour and S.J. Cooke. 2018. Comparison of vegetable shortening and cocoa butter as vehicles for cortisol manipulation in fish from north temperate regions. Journal of Fish Biology. 92(1):229-236.
Young, N., M. Corriveau, V.M. Nguyen, S.J. Cooke and S.G. Hinch. 2018. Embracing disruptive new science? Biotelemetry meets co-management in Canada’s Fraser River. Fisheries. 43(1):51-60.
Silva, A.T., M.C. Lucas, T. Castro-Santos, C. Katopodis, L.J. Baumgartner, J.D. Thiem, K. Aarestrup, P.S. Pompeu, G.C. O’Brien, D. Braun, N.J. Burnett, D.Z. Zhu, H-P. Fjeldstad, T. Forseth, N. Rajaratnam, J.G. Williams and S.J. Cooke. 2018. The future of fish passage science, engineering, and practice. Fish and Fisheries. 19(2):340-362.
Birnie-Gauvin, K., M.H. Larsen, K. Aarestrup, W.G. Willmore and S.J. Cooke. 2018. N-acetylcysteine manipulation fails to elicit an increase in glutathione in a teleost model. Fish Physiology and Biochemistry. 44(1):137-142.
Cooke, S.J., W.M. Twardek, R.J. Lennox, A.J. Zolderdo, S.D. Bower, L.F.G. Gutowsky, A.J. Danylchuk, R. Arlinghaus and T.D. Beard. 2018. The nexus of fun and nutrition: Recreational fishing is also about food. Fish and Fisheries. 19(2): 201-224.
Cook, K.V., S.G. Hinch, S.M. Drenner, E.A. Halfyard, G.D. Raby and S.J. Cooke. 2018. Population-specific mortality in coho salmon (Oncorhynchus kisutch) released from a purse seine fishery. ICES Journal of Marine Science. 75(1):309-318.
Hayden, T.A., T.R. Binder, C.M. Holbrook, C.S. Vandergoot, D.G. Fielder, S.J. Cooke, J.M. Dettmers and C.C. Krueger. 2018. Spawning site fidelity and apparent annual survival of walleye (Sander vitreus) differs between a Lake Huron and Lake Erie tributary. Ecology of Freshwater Fish. 27: 339-349.
Midwood, J.D., L.F.G. Gutowsky, B. Hlevca, Rick Portiss, M.G. Wells, S.E. Doka and S.J. Cooke. 2018. Tracking bowfin with acoustic telemetry: insight into the ecology of a living fossil. Ecology of Freshwater Fish. 27(1): 225–236.
McGaw, I.J., C. Steell, T.E. Van Leeuwen, E.J. Eliason and S.J. Cooke. 2017. Application of miniature heart-rate data loggers for use in free moving decapod crustaceans: method development and validation. Physiological and Biochemical Zoology. 91(1):731-739.
Xia, J., M. Cheng, R. Cai, S. Fu, S.J. Cooke and C.K. Elvidge. 2017. Ontogenetic changes in chemical alarm cue recognition and fast-start performance in guppies (Poecilia reticulata). Ethology. 123(12): 916-923.
Gallagher, A.J., P. Szekeres, S.J. Cooke, and J.M. Farrell. 2017. Tracking young-of-year northern pike and muskellunge: monitoring behavior and habitat use during fall outmigration from nursery sites. American Fisheries Society Symposium 00:000-000.
Brooks, J.L., C. Boston, S. Doka, D. Gorsky, K. Gustavson, D. Hondorp, D. Isermann, J. D. Midwood, T.C. Pratt, A. M. Rous, J. L. Withers, C.C. Krueger, & S. J. Cooke. 2017. Use of fish telemetry in rehabilitation planning, management, and monitoring in Areas of Concern in the Laurentian Great Lakes. Environmental Management. 60(6):1139–1154.
Struthers, D.P., L.F.G. Gutowsky, E.C. Enders, K.E. Smokorowski, D.A. Watkinson, A.T. Silva, M. Cvetkovic, E. Bibeau and S.J. Cooke. 2017. Factors influencing the spatial ecology of Lake Sturgeon and Walleye within an impounded reach of the Winnipeg River. Environmental Biology of Fishes. 100:1085–1103.
Ford, M.I., C.K. Elvidge, D. Baker, T.C. Pratt, K.E. Smokorowski, P. Patrick, M. Sills and S.J. Cooke. 2017. Evaluating a light-louver system for behavioural guidance of age-0 white sturgeon. River Research and Applications. 33:1286–1294.
Schoonyan, A., R.T. Kraus, M.D. Faust, A. Cook, C.S. Vandergoot, C.C. Krueger and S.J. Cooke. 2017. Estimating Incision Healing Rate for Surgically Implanted Acoustic Transmitters from Recaptured Adult walleye (Sander vitreus). Animal Biotelemetry. 5:15.
Landsman, S.J., A.D.M. Wilson, S.J. Cooke and M.R. van den Heuvel. 2017. Fishway passage success for migratory rainbow smelt Osmerus mordax is not dictated by behavioural type. River Research and Applications. 33:1257–1267.
Gutowsky, L.F.G., Harrison, P.M., Martins, E.G., Leake, A., Patterson, D.A., Zhu, D.Z., Power, M., Cooke, S.J. 2017. Daily temperature experience and selection by adfluvial bull trout (Salvelinus confluentus). Environmental Biology of Fishes. 100:1167–1180.
Hammerschlag, N., L.F.G. Gutowsky, A.J. Gallagher, P. Matich and S.J. Cooke. 2017. Diel habitat use patterns of a marine apex predator (tiger shark, Galeocerdo cuvier) at a high use area exposed to dive tourism. Journal of Experimental Marine Biology and Ecology. 495:24-34.
Diggles, B.K., Arlinghaus, R., Browman, H. I., Cooke, S. J., Cowx, I. G., Kasumyan, A. O., Key, B., Rose, J. D., Sawynok, W., Schwab, A., Skiftesvik, A. B., Stevens, E. D., Watson, C. A. and Wynne, C. D. L. 2017. Responses of larval zebrafish to low pH immersion assay generate multiple interpretations, questions and problems. Comment on Lopez-Luna et al. (2017). Journal of Experimental Biology. 220:3191-3192.
Madliger, C.L., S.J. Cooke and O.P. Love. 2017. A call for more physiology at conservation conferences. Biodiversity and Conservation. 26:2507-2515.
Brownscombe, J.W., S.J. Cooke, D.A. Algera, K.C. Hanson, E.J. Eliason, N.J. Burnett, A.J. Danylchuk, S.G. Hinch, and A.P. Farrell. 2017. Ecology of exercise in wild fish: integrating concepts of individual physiological capacity, behaviour and fitness through diverse case studies. Integrative and Comparative Biology. 57:281-292.
Cooke, S.J., V.M. Nguyen, S.T. Kessel, N.E. Hussey, N. Young and A.T. Ford. 2017. Troubling and unanticipated issues at the frontier of animal tracking for conservation and management. Conservation Biology. 31:1205-1207.
Twardek, W.M., C.K. Elvidge, A.D.M. Wilson, D.A. Algera, A. Zolderdo, S.C. Lougheed and S.J. Cooke. 2017. Do protected areas mitigate the effects of fisheries-induced evolution on parental care behaviour of a teleost fish? Aquatic Conservation. 27:789-796.
Reid, A.J., J.L. Brooks, L. Dolgova, B. Laurich, B.G. Sullivan, P. Szekeres, S.L.R. Wood, J.R. Bennett and S.J. Cooke, S.J. 2017. Post-2015 Sustainable Development Goals still neglecting their environmental roots in the Anthropocene. Environmental Science and Policy. 77:179-184.
Lennox RJ, Alós J, Arlinghaus A, Horodysky A, Klefoth T, Monk CT, Cooke SJ. 2017 . What makes fish vulnerable to capture by hooks? A conceptual framework and a review of key determinants. Fish and Fisheries 18(5):986-1010.
Bliss, S.M., R.J. Lennox, J.D. Midwood and S.J. Cooke. 2017. Temporally stable and distinct fish assemblages between stream and earthen stormwater drain reaches in an urban watershed. Urban Ecosystems. 20(5):1045-1055.
Redfern, J.C., S.J. Cooke, R.J. Lennox, M.A. Nannini, D.H. Wahl and Kathleen M. Gilmour. 2017. Effects of maternal cortisol treatment on offspring size, responses to stress, and anxiety related behavior in wild largemouth bass (Micropterus salmoides). Physiology and Behavior. 180(15):15-24.
Lennox RJ, Aarestrup K, Cooke SJ, Cowley PD, Deng ZD, Fisk AT, Harcourt RG, Heupel M, Hinch SG, Holland KN, Hussey NE, Iverson SJ, Kessel ST, Kocik JF, Lucas MC, Mills Flemming J, Nguyen VM, Stokesbury MJW, Vagle S, VanderZwaag DL, Whoriskey FG, Young N. 2017. Envisioning the future of aquatic animal tracking: Technology, science, and application. BioScience. 67(10):884-896.
Birnie-Gauvin, K., D. Costantini, S.J. Cooke, and W.G Willmore. 2017. A comparative and evolutionary approach to oxidative stress in fish: a review. Fish and Fisheries. 18: 928-942. doi: 10.1111/faf.12215
Cooke, S.J., K. Birnie-Gauvin, R.J. Lennox, J.J. Taylor, T. Rytwinski, J.L. Rummer, C.E. Franklin, J.R. Bennett and N.R. Haddaway. 2017. How experimental biology and ecology can support evidence-based decision-making in conservation: Avoiding pitfalls and enabling application. Conservation Physiology 5(1):cox043
Taylor, J.J., T. Rytwinski, J.R. Bennett and S.J. Cooke. 2017. Lessons for introducing stakeholders to environmental evidence synthesis. Environmental Evidence. 6:26.
Harrison, P.M., Gutowsky, L.F.G, Martins, E.G., Patterson, D.A., Cooke, S.J., and Power, M. 2017. Partial diel migration: a facultative migration underpinned by long-term inter-individual variation. Journal of Animal Ecology. 86: 246-125.
Twardek, W., K.S. Peiman, A.J. Gallagher, and S.J. Cooke. 2017. Fido, fluffy, and wildlife conservation: The environmental consequences of domesticated animals. Environmental Reviews. 25:381-395.
Lawrence, M.J., A.J. Zolderdo and S.J. Cooke. 2017. The consequences of war on the natural environment. Pages 48-62 in W.H. Wiist and S.K. White, Eds. Preventing War and Promoting Peace: A Guide for Health Professionals. Cambridge University Press, UK.
Lynch, A.J., I.G. Cowx, E. Fluet-Chouinard, S.M. Glaser, S.C. Phang, T.D. Beard, Jr., S.D. Bower, J.L. Brooks, D.B. Bunnell, J.E. Claussen, S.J. Cooke, Y.-C. Kao, K. Lorenzen, B.J.E. Myers, A.J. Reid, J.J. Taylor and S. Youn. 2017. Inland fisheries – invisible but integral to the UN Sustainable Development Agenda for ending poverty by 2030. Global Environmental Change. 47: 167-173.
Birnie-Gauvin, K., K.S. Peiman, M.H. Larsen, H. Baktoft, K. Aarestrup, W.G. Willmore, and S.J. Cooke. 2017. Oxidative stress and partial migration in a salmonid fish. Canadian Journal of Zoology. 95: 829–835.
Song, A.M., Bower, S.D., Onyango, P., Cooke, S.J., Chuenpagdee, R. 2017. Inter-Sectoral Governance of Inland Fisheries: Research Needs and Foci. Pages 1 to 17 in Inter-sectoral governance of inland fisheries. TBTI Publication Series, E-01/2017. Too Big To Ignore-WorldFish. St John’s, Canada.
Song, A.M., Bower, S.D., Onyango, P., Cooke, S.J., Chuenpagdee, R. (Eds.). (2017). Inter-sectoral governance of inland fisheries. TBTI Publication Series, E-01/2017. Too Big To Ignore-WorldFish. St John’s, Canada.
Peiman, K.S., K. Birnie-Gauvin, M.H. Larsen, S.F. Colborne, K.M. Gilmour, K. Aarestrup, W.G. Willmore and S.J. Cooke. 2017. Morphological, physiological and dietary covariation in migratory and resident adult brown trout (Salmo trutta). Zoology. 123:79-90.
Prystay, T.S., E.J. Eliason, M.J. Lawrence, M. Dick, J.W. Brownscombe, D.A. Patterson, G.T. Crossin, S.G. Hinch, and S.J. Cooke. 2017. The influence of water temperature on sockeye salmon heart rate recovery following simulated fisheries interactions. Conservation Physiology. 5(1); doi:10.1093/ conphys/cox050..
Algera, D.A., J.W. Brownscombe, K.M. Gilmour, M.J. Lawrence, A.J. Zolderdo and S.J. Cooke. 2017. Cortisol treatment affects locomotor activity and swimming behaviour of male smallmouth bass engaged in paternal care: A field study using acceleration biologgers. Physiology and Behavior. 181:59-68.
Lennox, R.J., T.B. Havn, E.B. Thorstad, E. Liberg, S.J. Cooke and I. Uglem. 2017. Behaviour and survival of wild Atlantic salmon (Salmo salar) captured and released while surveillance angling for escaped farmed salmon. Aquaculture Environment Interactions. 09: 311–319.
Lennox RJ, Filous A, Danylchuk SC, Cooke SJ, Brownscombe JW, Friedlander AM, Danylchuk AJ. 2017. Factors influencing post-release predation for a catch-and-release tropical flats fishery with a high predator burden. North American Journal of Fisheries Management 37:1045–1053.
Nguyen, V.M., Young, M., Hinch, S.G., Cooke, S.J. 2016. Getting past the blame game: convergence and divergence in perceived threats to salmon resources among anglers and indigenous fishers in Canada’s lower Fraser River. AMBIO. DOI 10.1007/s13280-016-0769-6.
Elmer, L. K., Kelly, L., Rivest, S., Steell, C. Twardek, W., Danylchuk, A. J., Arlinghaus, R., Bennett, J. R., Cooke, S. J. 2017. Angling into the future: Ten commandments for recreational fisheries science, management, and stewardship in a good Anthropocene. Environmental Management 60:165-175.
Cooke, S.J., S. Johansson, K. Andersson, B. Livoreil, G. Post, R. Richards, R. Stewart and A.S. Pullin. 2017. Better evidence, better decisions, better environment: Emergent themes from the first environmental evidence conference. Environmental Evidence. 6:15. https://doi.org/10.1186/s13750-017-0092-0
Birnie-Gauvin, K., K.S. Peiman, D. Raubenheimer and S.J. Cooke. 2017. Nutritional physiology and ecology of wildlife in a changing world. Conservation Physiology. 5 (1) DOI: https://doi.org/10.1093/
Birnie-Gauvin, K., S. Walton, C.A. Delle Palme, B.A. Manouchehri, S. Venne, R.J. Lennox, J.M. Chapman, J.R. Bennett and S.J. Cooke. 2017. Conservation physiology can inform threat assessment and recovery planning processes for threatened species. Endangered Species Research. 32:507-513.
Peiman, K.S., K. Birnie-Gauvin, J.D. Midwood, M.H. Larsen, A.D.M. Wilson, K. Aarestrup and S.J. Cooke. 2017. If and when: Intrinsic differences and environmental stressors influence migration in brown trout (Salmo trutta). Oecologia. 184:375-384.
Elmer, L.K., C.M. O’Connor, D.P. Philipp, G. Van Der Kraak, K.M. Gilmour, W.G. Willmore, B.L. Barthel and S.J. Cooke. 2017. Oxidative ecology of paternal care in wild smallmouth bass, Micropterus dolomieu. Journal of Experimental Biology. 220:1905-1914.
Midwood JD, Peiman KS, Burt AEW, Sarker MY, Nannini MA, Wahl DH, and Cooke SJ. 2017. Size-dependent consequences of exogenous cortisol manipulation on overwinter survival and condition of largemouth bass. Journal of Experimental Zoology Part A. 327:5-17.
Nguyen V.M., Brooks, J.L., Young, N., Lennox, R., Haddaway, N., Whoriskey, F., Harcourt, R., Cooke, S.J. 2017. To share or not to share in the emerging era of big data: Perspectives from fish telemetry researchers on data sharing. Canadian Journal of Fisheries and Aquatic Sciences. 74:1260-1274.
Cairns, N.A., L.J. Stoot, G. Blouin-Demers and S.J. Cooke. 2017. Using behavioral observations to develop escape devices for freshwater turtles entrapped in fishing nets. Journal of Fish and Wildlife Management. 8:4-14.
Gutowsky, L.F.G., Stoot, L.J., Cairns, N.A., Thiem, J.D., Brownscombe, J.W., Danylchuk, A.J., Blouin-Demers, G., Cooke, S.J. 2017. Biologgers reveal post-release behavioural impairments of freshwater turtles following interactions with fishing nets. Animal Conservation 20:350-359.
Nguyen, V.M., N. Young, and S.J. Cooke. 2017. A roadmap for knowledge exchange and mobilization research in conservation and natural resource management. Conservation Biology. 31:789-798.
Twardek, W.M., R.J. Lennox, M.J. Lawrence, J. Monaghan Logan, P. Szekeres, A.J. Danylchuk and S.J. Cooke. 2017. Survival of Walleye released following ice-angling on Lake Nipissing. A report submitted to the Ontario Ministry of Natural Resources and Forestry. FECPL Report 03-2017, Carleton University, Ottawa, Canada. 29pp
Rytwinski T, Taylor JJ, Bennett JR, Smokorowski, KE, Cooke SJ. 2017. What are the impacts of flow regime changes on fish productivity in temperate regions? A systematic map protocol. Environmental Evidence. 6:13. DOI 10.1186/s13750-017-0093-z
Paukert, C.P., A.J. Lynch, T.D. Beard, Y. Chen, S.J. Cooke, M.S. Cooperman, I.G. Cowx, L. Ibengwe, D.M. Infante, B.J.E. Myers, N. Phú Hòa, and I.J. Winfield. 2017. Designing a global assessment of climate change on inland fishes and fisheries: knowns and needs. Reviews in Fish Biology and Fisheries. DOI 10.1007/s11160-017-9477-y
Rytwinski T, Algera DA, Taylor JJ, Smokorowski, KE, Bennett JR, Harrison PM, Cooke SJ (2017) What are the consequences of fish entrainment and impingement associated with hydroelectric dams on fish productivity? A systematic review protocol. Journal of Environmental Evidence 6:8
Crossin, G.T., Heupel, M., Holbrook, C.M., Hussey, N., Lowerre-Barbieri, S., Nguyen, V.M., Raby, G.D., Cooke, S.J. 2017. Acoustic telemetry and fisheries management. Ecological Applications. 00:1-19.
Cooke, E.L.L., A.D.M. Wilson, C.K. Elvidge and S.J. Cooke. 2017. Does capture method or the presence of aquatic protected areas influence the selective harvest of behavioural types in largemouth bass? Canadian Journal of Fisheries and Aquatic Sciences. 00:000-000 dx.doi.org/10.1139/cjfas-2016-0192
Patterson, D.A., Robinson, K.A., Raby, G.D., Bass, A.L., Houtman, R., Hinch, S.G., and Cooke, S.J. 2017. Guidance to Derive and Update Fishing-Related Incidental Mortality Rates for Pacific Salmon. DFO Can. Sci. Advis. Sec. Res. Doc. 2017/011. vii + 56 p.
Patterson, D.A., Robinson, K.A., Lennox, R.J., Nettles, T.L., Donaldson, L.A., Eliason, E.J., Raby, G.D., Chapman, J.M., Cook, K.V., Donaldson, M.R., Bass, A.L., Drenner, S.M., Reid, A.J., Cooke, S.J., and Hinch, S.G. 2017. Review and Evaluation of Fishing-Related Incidental Mortality for Pacific Salmon. DFO Can. Sci. Advis. Sec. Res. Doc. 2017/010. ix + 155 p
Ogburn, M.B., A-L. Harrison, F. Whoriskey, S.J. Cooke, J.E. Mills-Flemming and L.G. Torres. 2017. Addressing challenges in the application of animal movement ecology to aquatic conservation and management. Frontiers in Marine Science. 04:70 doi: 10.3389/fmars.2017.00070
Ward, T.D., J.W. Brownscombe, L.F.G. Gutowsky, R. Ballagh, N. Sakich, D. McLean, G. Quesnel, S. Gambhir, C.M. O’Connor and S.J. Cooke. 2017. Electric fish handling gloves provide effective immobilization and do not impede reflex recovery of adult Largemouth Bass. North American Journal of Fisheries Management. 37: 652-659.
Birnie-Gauvin, K., K.S. Peiman, M.H. Larsen, K. Aarestrup, W.G. Willmore and S.J. Cooke. 2017. Short-term and long-term effects of transient exogenous cortisol manipulation on oxidative stress in juvenile brown trout. Journal of Experimental Biology. 220: 1693-1700.
Wilson, A.D.M., Szekeres, P., Violich, M., Gutowsky, L.F.G., Eliason, E. and S.J. Cooke. 2017. Activity syndromes and metabolism in giant deep-sea isopods. Deep-Sea Research Part 1. 121: 237-244.
Lawrence, M.J., E.J. Eliason, J.W. Brownscombe, K.M. Gilmour, J.W. Mandelman and S.J. Cooke. 2017. An experimental evaluation of the role of the stress axis in mediating predator-prey interactions in wild marine fish. Comparative Physiology and Biochemistry A. 207: 21-29.
Lennox RJ, Cooke SJ, Davis CR, Gargan P, Hawkins LA, Havn TB, Johansen MR, Kennedy R, Richard A, Svenning M-A, Uglem I, Webb J, Whoriskey FG, Thorstad EB. 2017. Pan-Holarctic assessment of post-release mortality of angled Atlantic salmon Salmo salar. Biological Conservation 209: 150-158
Struthers, D.P., L.F.G. Gutowsky, E. Enders, K. Smokorowski, D. Watkinson, E. Bibeau and S.J. Cooke. 2017. Evaluating riverine hydrokinetic turbine operations relative to the spatial ecology of wild fishes. Journal of Ecohydraulics. 2:53-67.
Costa, M.J., R.J. Lennox, C. Katopodis and S.J. Cooke. 2017. Is there evidence for flow variability as an organism level stressor in fluvial fish? Journal of Ecohydraulics. 2:68-83.
Griffin, L.P., J.W. Brownscombe, T.O. Gagné, A.D.M. Wilson, S.J. Cooke and A.J. Danylchuk. 2017. Individual-level behavioral responses of immature green turtles to snorkeler disturbance. Oecologia. 00:000-000.
Messmer, V., M.S. Pratchett, A.S. Hoey, A.J. Tobin, D.J. Coker, S.J. Cooke and T.D. Clark. 2017. Global warming will disproportionately affect larger adults in a predatory coral reef fish. Global Change Biology. 23: 2230–2240.
Twardek, W.M., A.D. Shultz, J.E. Claussen, S.J. Cooke, J.A. Stein, J.B. Koppelman, F.J.S. Phelan and D.P. Philipp. 2017. Potential consequences of angling on nest-site fidelity in largemouth bass. Environmental Biology of Fishes. 100: 611-617.
Cooke, S.J., R.J. Lennox, S.D. Bower, A.Z. Horodysky, M.K. Treml, E. Stoddard, L.A. Donaldson and A.J. Danylchuk. 2017. Fishing in the dark – the science and management of recreational fisheries at night. Bulletin of Marine Science. 93:519-538
Bower, S.D., H. Kooner, H. Ludwig, S. Lumb, J. Raina, J. Webb, Z. Zrini, C.M. O’Connor and S.J. Cooke. 2017. Diel patterns of hooking depth for active and passive angling methods for two freshwater teleost fishes. Bulletin of Marine Science. 93:507-517.
Szekeres, P., A.D.M. Wilson, C.R. Haak, A.J. Danylchuk, J.W. Brownscombe, C.K. Elvidge, A.D. Shultz and S.J. Cooke. 2017. Does Coastal Light Pollution Alter the Nocturnal Behavior and Blood Physiology of Juvenile Bonefish (Albula vulpes)? Bulletin of Marine Science. 93: 491-505.
Hammerschlag, N., C. Meyer, M. Grace, S. Kessell, T. Sutton, E.S. Harvey, C. Paris, D.W. Kerstetter and S.J. Cooke. 2017. Shining a light on fish at night: An overview of patterns and processes operating in fish and fisheries at night and in the perpetual darkness of deep and polar seas. Bulletin of Marine Science. 93:253-284.
Jain-Schlaepfer, S.M.R., G. Blouin-Demers, S.J. Cooke and G. Bulté. 2017. Do boating and basking mix? The effect of basking disturbances by motorboats on the body temperature and energy budget of the northern map turtle. Aquatic Conservation. 27: 547-558.
Belanger, C.B., Peiman, K.S., Vera-Chang, M.N., Moon, T.W., and Cooke, S.J. 2017. Pumpkinseed sunfish (Lepomis gibbosus) from littoral and limnetic habitats differ in stress responsiveness independent of environmental complexity and presence of conspecifics. Canadian Journal of Zoology 95: 193-202.
Gallagher, A.J., N. Hammerschlag, A.J. Danylchuk and S.J. Cooke. 2017. Shark recreational fisheries: status, challenges, and research needs. Ambio. 46:385-398.
Prystay, T.S., C.K. Elvidge, W.M Twardek, J.M. Logan, C.H. Reid, S.H. Clarke, J.G. Foster, E.L.L. Cooke and S.J. Cooke. 2017. Comparison of the behavioural consequences and recovery patterns of largemouth bass exposed to MS-222 or electrosedation. Transactions of the American Fisheries Society. 146:556–566.
Brownscombe J.W., A.J. Reid, L. Dolgova, R. Pusiak, B. Laurich, E.D. Turenne, A. Zolderdo, A. Moraga, K. Birnie-Gauvin, J. Brooks, B. Sullivan, M. Ford, S.D. Bower, P. Szekeres, J.R. Bennett, S.J. Cooke. Aquatic Conservation. In Oxford Bibliographies in Ecology. Ed. David Gibson. New York: Oxford University Press
Pinder, A.C., R. Velterop, S.J. Cooke, and J.R. Britton. 2017. Consequences of catch-and-release angling for black bream Spondyliosoma cantharus, during the parental care period: implications for management. ICES Journal of Marine Science. 74:1-7.
Gallagher, A.J., E.R. Staaterman, S.J. Cooke, N. Hammerschlag. In Press. Behavioural responses to fisheries capture among sharks caught using experimental fishery gear. Canadian Journal of Fisheries and Aquatic Sciences. 74:1-7.
Elvidge, C.K., E.L.L. Cooke, R.A. Cunjak and S.J. Cooke. 2017. Social cues may advertise habitat quality to refuge-seeking conspecifics. Canadian Journal of Zoology. 95:1-5.
Wilson, A.D.M., T. Hayden, C.S. Vandergoot, R.T. Kraus, J.M. Dettmers, S.J. Cooke and C.C. Krueger. 2017. Do intracoelomic telemetry transmitters alter the post-release behaviour of migratory fish? Ecology of Freshwater Fish. 26: 292–300.
Teffer, A.K., S.G. Hinch, K.M. Miller, D.A. Patterson, A.P. Farrell, S.J. Cooke, A.L. Bass, P. Szekeres and F. Juanes. 2017. Capture severity, infectious disease processes and sex influence post-release mortality of sockeye salmon bycatch. Conservation Physiology. 10.1093/conphys/cox017
Cooke, S.J., S. Wesch, L.A. Donaldson, A.D.M. Wilson and N. Haddaway. 2017. A call for evidence-based conservation and management of fisheries and aquatic resources. Fisheries. 42(3): 143-149.
Cooke, S.J., A.J. Gallagher, N.M. Sopinka, V.M. Nguyen, R.A. Skubel, N. Hammerschlag, S. Boon, N. Young and A.J. Danylchuk. 2017. Considerations for effective science communication. FACETS Journal. 2: 233–248.
Harrison P.M, Gutowsky L.F.G., Martins E.G., Ward T.D., Patterson D.A., Cooke S.J., and Power M. 2007. Individual isotopic specialisations predict subsequent inter-individual variation in movement in a freshwater fish. Ecology. 98(3):608-615.
Taylor JJ, Rytwinski T, Bennett JR, Smokorowski KE, Cooke SJ. 2017. The effectiveness of spawning habitat creation or enhancement for substrate spawning temperate fish: a systematic review protocol. Environmental Evidence 06:05
Madliger, C.L., C.E. Franklin, K.R. Hultine, M. van Kleunen, R.J. Lennox, O.P. Love, J.L. Rummer and S.J. Cooke. 2017. Conservation physiology and the quest for a “good” Anthropocene. Conservation Physiology. 07:1-10.
Lynch, A. J., S.J. Cooke, T. D. Beard, Jr., Y.-C. Kao, K. Lorenzen, A. M. Song, M. S. Allen, Z. Basher, D. B. Bunnell, E. V. Camp, I. G. Cowx, J. A. Freedman, V. M. Nguyen, J. K. Nohner, M. W. Rogers, Z. A. Siders, W. W. Taylor, and S-J. Youn. 2017. Grand challenges in the management and conservation of North American inland fish and fisheries. Fisheries. 42:2, 115-124.
Gagne, T.O., K.L. Ovitz, L.P. Griffin, J.W. Brownscombe, S.J. Cooke, and A.J. Danylchuk. 2017. Evaluating the consequences of catch-and-release recreational angling on golden dorado (Salminus brasiliensis) in Salta, Argentina. Fisheries Research.
Brownscombe, J.W., A.J. Danylchuk and S.J. Cooke. 2017. Spatiotemporal drivers of energy expenditure in a coastal marine fish. Oecologia. 183: 689–699
Gallagher, A.J., S. Creel, R.J. Wilson and S.J. Cooke. 2017. Energy landscapes and the landscape of fear. Trends in Ecology and Evolution 32(2).
Ford, A.T., S.J. Cooke, J.R. Goheen, and T.P. Young. 2017. Conserving megafauna or sacrificing biodiversity? A response to Ripple et al. BioScience. 00:000-000
Burnett, N.J., S.G. Hinch, N.N. Bett, D.C. Braun, M.T. Casselman, S.J. Cooke, A. Gelchu, S. Lingard, C.T. Middleton, V. Minke-Martin, and C.F.H. White. 2017. Reducing carryover effects on migration and spawning success of salmon through a management experiment of dam flows. River Research and Applications. 33:3-15.
Brownscombe, J.W., T.P. Parma, J. Almeida, E. Giesbrecht. J. Batson, X. Chen, S. Wesch, T.D. Ward, C. O’Connor, and S.J. Cooke. 2017. The efficacy of assisted ventilation techniques for facilitating the recovery of fish that are exhausted from simulated angling stress. Fisheries Research.
Bower, S.D., A.J. Danylchuk, R. Raghavan, S. Clark Danylchuk, A.C. Pinder, A.M. Alter, and S.J. Cooke. 2017. Involving recreational fisheries stakeholders in development of research and conservation priorities for mahseer (Tor spp.) of India through collaborative workshops. Fisheries Research. 186:665-681.
Cooke, S.J., L.Y. Palensky, and A.J. Danylchuk. 2017. Inserting the angler into catch-and-release angling science and practice. Fisheries Research. 186:599-600.
Bower, S.D., Raghavan, R., Mahesh, N., Danylchuk A.J., Cooke, S.J. Inter-sectoral fisheries governance issues and solutions on the Cauvery River, India. In: A.M. Song, S.D. Bower, P. Onyango, S.J. Cooke, R. Chuenpagdee (Eds.), Inter-Sectoral Governance of Inland Fisheries. TBTI Publication Series, St John’s, NL, Canada.
Danylchuk, A.J., J. Tiedemann, and S.J. Cooke. 2017. Perceptions of recreational fisheries conservation within the fishing industry: knowledge gaps and learning opportunities identified at east coast trade shows in the United States. Fisheries Research. 186:681-687.
Algera, D.A., L.F.G. Gutowsky, A.J. Zolderdo and S.J. Cooke. 2017. Parental Care in a Stressful World: Experimentally Elevated Cortisol and Brood Size Manipulation Influence Nest Success Probability and Nest-Tending Behavior in a Wild Teleost Fish Physiological and Biochemical Zoology. 90(1):85–95.
Barkley, A.N., S.J. Cooke, A.T. Fisk, K. Hedges and N.E. Hussey. 2017. Capture-induced stress in deep-water Arctic fish. Polar Biology. 40:213–220.
Rous, A.M., J.D. Midwood, L.F.G. Gutowsky, N.W.R Lapointe, R. Portiss, T. Sciscione, M.G. Wells, S.E. Doka, and S.J. Cooke. 2017. Telemetry-determined habitat use informs multi-species habitat management in an urban harbour. Environmental Management 59: 118-128.
Cooke, S.J., K.R. Hultine, J.L. Rummer and C.E. Franklin. 2017. Reflections and progress in conservation physiology. Conservation Physiology. 05:1-3.
Magel, J.M.T., N. Pleizier, A.D.M. Wilson, A.D. Shultz, M.N. Vera-Chang, T.W. Moon and S.J. Cooke. 2017. Do physical habitat complexity and predator cues influence the baseline and stress-induced glucocorticoid levels of a mangrove-associated fish? Comparative Biochemistry and Physiology A. 203:281-287.
Xia, J., Y. Ma, C. Fu, S. FuIn and S.J. Cooke. 2017. Effects of temperature acclimation on the critical thermal limits and swimming performance of Brachymystax lenok tsinlingensis: a threatened fish in Qinling Mountain region of China. Ecological Research. 32:61-70.
Bouyoucos, I.A., D.W. Montgomery, J.W. Brownscombe, S.J. Cooke, C.D. Suski, J.W. Mandelman and E.J. Brooks. 2017. Swimming speeds and metabolic rates of semi-captive juvenile lemon sharks (Negaprion brevirostris, Poey) estimated with acceleration biologgers. Journal of Experimental Marine Biology and Ecology. 486:245-254.
Kerr SM, Ward TD, Lennox RJ, Brownscombe JW, Chapman JM, Gutowsky LFG, Logan JM, Twardek WM, Elvidge CK, Danylchuk AJ, Cooke SJ. 2017. Influence of hook type and live bait on the hooking performance of inline spinners in the context of catch-and-release brook trout Salvelinus fontinalis fishing in lakes. Fisheries Research 186:642-647.
Pullen, C.E., K. Hayes, C.M. O’Connor, R. Arlinghaus, C.D. Suski, J.D. Midwood and S.J. Cooke. 2017. Consequences of oral lure retention on the physiology and behaviour of adult northern pike (Esox lucius L.). Fisheries Research.
Brownscombe, J.W, A.J. Danylchuk, J.M. Chapman, L.F.G. Gutowsky, and S.J. Cooke. 2017. Best practices for catch-and-release recreational fisheries – angling tools and tactics. Fisheries Research.
Gutowsky, L.F.G., B.G. Sullivan, A.D.M. Wilson and S.J. Cooke. 2017. Synergistic and interactive effects of angler behaviour, gear type, and fish behaviour on hooking depth in passively angled fish. Fisheries Research.
McLean, M.F., Hanson, K.C., Cooke, S,J., Hinch, S.G., Patterson, D.A., Nettles, T.L., Litvak, M.K., Crossin, G.T. 2016. Physiological stress response, reflex impairment, and delayed mortality of white sturgeon Acipenser transmontanus exposed to simulated fisheries stressors. Conservation Physiology 4: cow031
Sopinka, N.M., M.R. Donaldson, C.M. O’Connor, C.D. Suski and S.J. Cooke. 2016. Stress indicators in fish. Pages 406-436 in Fish Physiology, Vol. 35, Biology of Stress in Fish (eds. C.B. Schreck, L. Tort, A.P. Farrell and C.J. Brauner), Academic Press, Amsterdam.
Harvey-Lavoie, S., S.J. Cooke, G. Guénard and D. Boisclair. 2016. Differences in movements of northern pike inhabiting rivers with contrasting flow regimes. Ecohydrology. 9:1687-1699.
Hayden, T.A., C.M. Holbrook, T.R. Binder, J.M. Dettmers, S.J. Cooke, C.S. Vandergoot and C.C. Krueger. 2016. Probability of acoustic transmitter detections by receiver lines in Lake Huron: results of multi-year field tests and simulations. Journal of Animal Biotelemetry. 04:19.
Eales, J., N.R. Haddaway, C. Bernes, S.J. Cooke, B.G. Jonsson, J. Kouki, and G. Petrokofsky. 2016. What is the effect of prescribed burning in temperate and boreal forest on biodiversity, beyond tree regeneration, pyrophilous and saproxylic species? A systematic review protocol. Environmental Evidence. 05:24.
Foster, J.G., D.A. Algera, J.W. Brownscombe, A.J. Zolderdo and S.J. Cooke. 2016. Consequences of different types of littoral zone light pollution on the parental care behaviour of a freshwater teleost fish. Water, Air, and Soil Pollution. 227: 404. doi:10.1007/s11270-016-3106-6
Young, N., M. Corriveau, V.M. Nguyen, S.J. Cooke and S.G. Hinch. 2016. How do potential knowledge users evaluate new claims about a contested resource? Problems of power and politics in knowledge exchange and mobilization. Journal of Environmental Management. 184: 380-388.
McKenzie, D.J., M. Axelsson, D. Chabot, G. Claireaux, S.J. Cooke, R.A. Corner, G. De Boeck, P. Domenici, P.M. Guerreiro, B. Hamer, C. Jørgensen, S.S. Killen, S. Lefevre, S. Marras, B. Michaelidis, G.E. Nilsson, M.A. Peck, A. Perez-Ruzafa, A.D. Rijnsdorp, H.A. Shiels, J.F. Steffensen, J.C. Svendsen, M.B.S. Svendsen, L.R. Teal, J. van der Meer, T. Wang, J.M. Wilson, R.W. Wilson and J.D. Metcalfe. 2016. Conservation physiology of marine fishes: State of the art and prospects for policy. Conservation Physiology. 4:1-20.
Key, B., R. Arlinghaus, H.I. Browman, S.J. Cooke, I.G. Cowx, B.K. Diggles, J.D. Rose, W. Sawynok, A. Schwab, A.B. Skiftesvik, E.D. Stevens and C.A. Watson. 2016. Problems with equating thermal preference with “emotional fever” and sentience. Comment on Rey et al. (2015) Fish can show emotional fever: stress-induced hyperthermia in zebrafish. Proceedings of the Royal Society of London B. 00:000-000.
Dunmall, K.M., and S.J. Cooke. 2016. Narrow or broad: diverse academic pathways to a career in fisheries science and management. Fisheries. 41:477-478.
Birnie-Gauvin, K., K.S. Peiman, A.J. Gallagher, R. de Bruijn and S.J. Cooke. 2016. Sublethal consequences of urban life for wild vertebrates. Environmental Reviews. 24:416-425.
Cooke, S.J., J.W. Brownscombe, G.D. Raby, F. Broell, S.G. Hinch, T.D. Clark and J.M. Semmens. 2016. Remote bioenergetics measurements in wild fish: opportunities and challenges. Comparative Biochemistry and Physiology A. 202:23-37.
Gallagher, A.J., M.J. Lawrence, S.M.R. Jain-Schlaepfer, A.D.M. Wilson and S.J. Cooke. 2016. Avian predators transmit fear along the air-water interface influencing prey and their parental care. Canadian Journal of Zoology. 94: 863–870.
Delle Palme, C.A., V.M. Nguyen, L.F.G Gutowsky and S.J Cooke. 2016. Do Fishing Education Programs Effectively Transfer Catch-And-Release Best Practices to Youth Yielding Improvements in Fish Condition and Survival? Knowledge and Management of Aquatic Ecosystems. 417:42.
Midwood, J.D., M.H. Larsen, K. Aarestrup and S.J. Cooke. 2016. Stress and food deprivation: linking physiological state to migration success in a teleost fish. Journal of Experimental Biology. 219: 3712-3718
Szekeres, P., E.J. Eliason, D. Lapointe, M.R. Donaldson, J.W. Brownscombe and S.J. Cooke. 2016. On the neglected cold side of climate change and its implications for fish. Climate Research. 69:239-245.
Gutowsky, L.F.G., Brownscombe, J.W., Wilson, A.D.M., Szekeres, P., and Cooke, S.J. 2016. Improved performance, within-individual consistency and between-individual differences in the righting behaviour of the Caribbean sea star, Oreaster reticulatus. Behaviour. 153:1763–1776.
Cooke, S.J., C.J.A. Cooke and J.W. Brownscombe. 2016. Ultralight or heavyweight? The interactive effects of gear strength and air exposure on reflex impairment in largemouth bass. Transactions of the American Fisheries Society. 145:6,1202-1207.
Peat, T.B., L.F.G. Gutowsky, S.E. Doka, J.D. Midwood, N.W.R. Lapointe, B. Hlevca, M.G. Wells, R. Portiss and S.J. Cooke. 2016. Comparative Thermal Biology and Depth Distribution of Northern Pike and Largemouth Bass in an Urban Harbour of the Laurentian Great Lakes. Canadian Journal of Zoology. 94:767-776.
Harrison, P.M., L.F.G. Gutowsky, E.G. Martins, D.A. Patterson, S.J. Cooke and M. Power. 2016. Burbot and large hydropower in North America: Benefits, threats, and research needs for mitigation. Fisheries Management and Ecology. 23:335–349.
Marriner, B.A., A.B.M. Baki, D.Z. Zhu, S.J. Cooke and C. Katopodis. 2016. The hydraulics of a vertical slot fishway: a case study on the multi-species Vianney-Legendre fishway in Quebec, Canada. Ecological Engineering. 90:190-202
McClellan Press, K., J. Mandelman, E. Burgess, S.J. Cooke, V.M. Nguyen, and A.J. Danylchuk. 2016. Catching sharks: recreational saltwater angler behaviors and attitudes regarding shark encounters and conservation. Aquatic Conservation: Marine and Freshwater Ecosystems. 26:689-702.
Cooke, S.J., E.H. Allison, T.D. Beard, R. Arlinghaus, A.H. Arthington, D.M. Bartley, I.G. Cowx, C. Fuentevilla, N. J. Leonard, K. Lorenzen, A.J. Lynch, V.M. Nguyen, S.-J. Youn, W.W. Taylor and R.L. Welcomme. 2016. On the sustainability of inland fisheries: Finding a future for the forgotten. Ambio. 45:753-764.
Binder, T.R., A.D.M. Wilson, S.M. Wilson, C.D. Suski, J-G.J. Godin and S.J. Cooke. 2016. Is there a pace-of-life syndrome linking boldness and metabolic capacity for locomotion in bluegill sunfish? Animal Behaviour. 121:175-183.
Taylor, J.J., N.M. Sopinka, S.M. Wilson, S.G. Hinch, D.A. Patterson, S.J. Cooke and W.G. Willmore. 2016. Examining the relationships between egg cortisol and oxidative stress in developing wild sockeye salmon (Oncorhynchus nerka). Comparative Biochemistry and Physiology A. 200:87-93.
Bellehumeur, K., D. Lapointe, S.J. Cooke and T.W. Moon. 2016. Exposure to sublethal levels of PCB-126 impacts fuel metabolism and swimming performance in rainbow trout. Comparative Biochemistry and Physiology B. 199:97-104.
Bower, S.D., A.J. Danylchuk, R. Raghavan, S. Clark-Danylchuk, A. Pinder, and S.J. Cooke. 2016. Rapid assessment of the physiological impacts caused by catch-and-release angling on blue-finned mahseer (Tor sp.) of the Cauvery River, India. Fisheries Management and Ecology 23:208-217.
Lennox R.J., G. Blouin-Demers, A.M. Rous, and S.J. Cooke. 2016. Tracking invasive animals with electronic tags to assess risks and develop management strategies. Biological Invasions. 18:1219–1233.
Patterson, D.A., S.J. Cooke, S.G. Hinch, K.A. Robinson, N. Young, A.P. Farrell and K.M. Miller. 2016. A perspective on physiological studies supporting the provision of scientific advice for the management of Fraser River sockeye salmon (Oncorhynchus nerka). Conservation Physiology. 4:1
Young, N., Nguyen, V.M., Corriveau, M., Cooke, S.J., Hinch, S.G. 2016. Knowledge users’ perspectives and advice on how to improve knowledge exchange and mobilization in the case of a co-managed fishery, Environmental Science & Policy. 66: 170-178.
Sullivan, B.G., A.D.M. Wilson, L.F.G. Gutowsky, P.H. Patrick, M. Sills and S.J. Cooke. 2016. The behavioral responses of a warm-water teleost to different spectra of light emitting diodes. North American Journal of Fisheries Management. 36(5): 100-1005.
Cooke, S.J. D.M. Bartley, T.D. Beard, I.G. Cowx, C. Goddard, C. Fuentevilla, N. Leonard, A.J. Lynch, K. Lorenzen and W.W. Taylor. 2016. From Ideas to Action: Ten Steps to Responsible Inland Fisheries that Support Livelihoods, Food Security, and Healthy Aquatic Ecosystems. Pages 343-351 in C. Goddard, N. Leonard, W.W. Taylor and D. Bartley, Eds. Freshwater, Fish, and the Future: Proceedings of the Global Cross-Sectoral Conference. American Fisheries Society, Bethesda, MD.
Beard T. D., E. H. Allison, D.M. Bartley, I.G. Cowx, , S. J. Cooke, C. Fuentevilla, A.J. Lynch, and W.W. Taylor. 2016. Inland fish and fisheries: A call to action. Pages 1-6 in C. Goddard, N. Leonard, W.W. Taylor and D. Bartley, Eds. Freshwater, Fish, and the Future: Proceedings of the Global Cross-Sectoral Conference. American Fisheries Society, Bethesda, MD.
Cooke, S.J., A.H. Arthington, S.A. Bonar, S.D. Bower, D.B. Bunnell, R.E.M. Entsua-Mensah, S. Funge-Smith, J.D. Koehn, N.P. Lester, K. Lorenzen, S. Nam, R.G. Randall, P. Venturelli and I.G. Cowx. In Press. Assessment of inland fisheries: A vision for the future. Pages 45-62 in C. Goddard, N. Leonard, W.W. Taylor and D. Bartley, Eds. Freshwater, Fish, and the Future: Proceedings of the Global Cross-Sectoral Conference. American Fisheries Society, Bethesda, MD.
Lorenzen, K., I.G. Cowx, R.E.M. Entsua-Mensah, N.P. Lester, J.D. Koehn, R.G. Randall, S. Nam, S.A. Bonar, D.B. Bunnell, P. Venutrelli, S.D. Bower and S.J. Cooke. 2016. Stock assessment in inland fisheries: a foundation for sustainable use and conservation. Reviews in Fish Biology and Fisheries. 26:405–440.
Gupta, N., S.D. Bower, S.J. Cooke, A.J. Danylchuk and R. Raghavan. 2016. Practices and attitudes of Indian catch-and-release anglers: identifying opportunities for advancing the management of recreational fisheries. Journal of Threatened Taxa. 8(4): 8659–8665.
Donaldson, M.R., N.J. Burnett, D.C. Braun, C.D. Suski, S.G. Hinch, S.J. Cooke, and J.T. Kerr. 2016. Taxonomic bias and international biodiversity conservation research. FACETS. 1: 105–113.
Arlinghaus, R., S.J. Cooke, S.G. Sutton, A.J. Danylchuk, K. De. M. F. Freire, J. Alos, E.T. Da Silva, I.G. Cowx and R. Van Anrooy. 2016. Recommendations for the future of recreational fisheries to prepare the social-ecological system for coping with change. Fisheries Management and Ecology.23; 177–186
Thiem, J.D., J.W. Dawson, D. Hatin, A.J. Danylchuk, P. Dumont, A.C. Gleiss, R.P. Wilson and S.J. Cooke. 2016. Swimming activity and energetic costs of adult lake sturgeon during fishway passage. Journal of Experimental Biology. 219; 2534-2544.
Nguyen, V.M., A.J. Lynch, N. Young, I.G. Cowx, T.D. Beard Jr., W.W. Taylor and S.J. Cooke. 2016. To manage inland fisheries is to manage at the social-ecological watershed scale. Journal of Environmental Management. 181; 312-325.
Hughes, R.M., C. B. M. Alves, F. Amezcua, J. Claussen, S. J. Cooke, I. G. Cowx, K. D. Fausch, M. T. Ferreira, W. G. Franzin, D. Hall, M. O. Ipinmoroti, R. Ligeiro, N. Mercado-Silva, M. Miller, P. S. Pompeu, D. C. Schmidt, L. G. M. Silva and B. F. Terra. 2016. Preparing for international research and teaching. Fisheries. 41:464-465.
Cooke, S.J., J.C. Rice, K.A. Prior, R. Bloom, O. Jensen, D.R. Browne, L.A. Donaldson, J.R. Bennett, J.C. Vermaire and G. Auld. 2016. The Canadian context for evidence-based conservation and environmental management. Environmental Evidence. 5:14
Whitney, J.E., R. Al-Chokhachy, D.B. Bunnell, C.A. Caldwell, S.J. Cooke, E.J. Eliason, M. Rogers, A. Lynch and C. Paukert. 2016. Physiological basis of climate change impacts on North American inland fishes. Fisheries. 41:7, 332-345.
Donaldson, L.A., and S.J. Cooke. 2016. The effectiveness of non-native fish eradication techniques in freshwater ecosystems: a systematic review protocol. Environmental Evidence. 5(12):1-10.
Cooke, S.J., E.G. Martins, D.P. Struthers, L.F.G. Gutowsky, M. Power, S.E. Doka, J.M. Dettmers, D.A. Crook, M.C. Lucas, C.M. Holbrook and C.C. Krueger. 2016. A moving target – incorporating knowledge of the spatial ecology of fish into the assessment and management of freshwater fish populations. Environmental Monitoring and Assessment. 188:Article #239.
Harrison, P.M., L.F.G. Gutowsky, E.G. Martins, D.A. Patterson, S.J. Cooke, and M. Power. 2016. Temporal plasticity in thermal habitat selection of burbot, Lota lota, a diel-migrating winter-specialist. Journal of Fish Biology. 88:2111–2129.
Lennox R.J., S.J. Cooke, O.H. Diserud, T.B. Havn, M. Rognli, M. Johansen, E.B. Thorstad, F.G. Whoriskey and I. Uglem. 2016. Use of simulation approaches to evaluate the consequences of catch-and-release angling on the migration behaviour of adult Atlantic salmon (Salmo salar). Ecological Modeling. 333: 43-50.
Dick, M., A.M. Rous, V.M. Nguyen and S.J. Cooke. 2016. Necessary but challenging: multiple disciplinary approaches to solving conservation problems. FACETS Journal. 1: 67-82 .
Raby, G.D., M.T. Casselman, S.J. Cooke, S.G. Hinch, A.P. Farrell and T.D. Clark. 2016. Aerobic scope increases throughout an ecologically relevant temperature range in coho salmon. Journal of Experimental Biology. 219: 1922-1931.
Lennox, R.J., M. Falkegård, L. A. Vøllestad, S.J. Cooke, and E.B. Thorstad. 2016. Influence of harvest restrictions on angler release behaviour and size selection in a recreational fishery. Journal of Environmental Management. 176: 139–148.
Pankhurst, K., J.D. Midwood, H. Wachelka and S.J. Cooke. 2016. Comparative spatial ecology of sympatric adult muskellunge and northern pike during a one year period in an urban reach of the Rideau River, Canada. Environmental Biology of Fishes. 99:409-421.
Zolderdo, A.J., D.A. Algera, M.J. Lawrence, K.M. Gilmour, M.D. Fast, J. Thuswaldner, W. Willmore and S.J. Cooke. 2016. Stress, nutrition and parental care in a teleost fish: Exploring mechanisms with supplemental feeding and cortisol manipulation. Journal of Experimental Biology. 219: 1237-1248.
Lynch, A. J., S. J. Cooke, A. Deines, S. Bower, D. B, Bunnell, I. G. Cowx, V. M. Nguyen, J. Nonher, K. Phouthavong, B. Riley, M. W. Rogers, W.W. Taylor, W.M. Woelmer, S. Youn and T. D. Beard, Jr. 2016. The social, economic, and ecological importance of inland fishes and fisheries. Environmental Reviews. 24: 115-121.
Lennox, R.J., I. Mayer, T.B. Havn, M.R. Johansen, K. Whoriskey, S.J. Cooke, E.B. Thorstad and I. Uglem. 2016. Consequences of recreational angling and air exposure on the physiological status and reflex impairment of European grayling (Thymallus thymallus). Boreal Environment Research. 21: 461–470.
Clark, T.D., N.B. Furey, E.L. Rechisky, M.K. Gale, K.M. Jeffries, A.D. Porter, M.T. Casselman, A.G. Lotto, D.A. Patterson, S.J. Cooke, A.P. Farrell, D.W. Welch and S.G. Hinch. 2016. Tracking wild sockeye salmon smolts to the ocean reveals distinct regions of nocturnal movement and high mortality. Ecological Applications. 26: 959–978.
Lennox, R.J., O.H. Diserud, S.J. Cooke, E.B. Thorstad, F.G. Whoriskey, Ø. Solem, T.B. Havn and I. Uglem. 2016. Switching between gear types increases recapture rates of Atlantic salmon (Salmo salar) in catch-and-release fisheries. Ecology of Freshwater Fish. 25:422-428.
Gutowsky, L.F.G., Harrison, P.M., Silva, A., Martins, E.G., Power, M., Zhu, D.Z., Cooke, S.J. 2016. Upstream passage and entrainment of fish at hydropower dams: lessons learned from NSERC’s HydroNet 2010-2015. DFO Can. Sci. Advis. Sec. Res. Doc. 2016/039. vii + 35 p
Cooke, S.J. 2016. Unraveling the mystery of marine fish migration. Book review of Secor’s “Ecology of Marine Fish Migration”. Ecology. 97:1086–1087
Ward, T.D., D.A. Algera, A.J. Gallagher, E. Hawkins, A. Horodysky, C. Jørgensen, S.S. Killen, D.J. McKenzie, J.D. Metcalfe, M.A. Peck, M. Vu, and S.J. Cooke. 2016. Understanding the Individual to Implement the Ecosystem Approach to Fisheries Management. Conservation Physiology. 4(1):cow005. doi:10.1093/conphys/cow005
Cooke, S.J., V.M. Nguyen, J.M. Dettmers, R. Arlinghaus, M.C. Quist, D. Tweddle, O.L.F. Weyl, R. Raghavan, M. Portocarrero-Aya, E. Agudelo Cordoba, and I.G. Cows. 2016. Sustainable inland fisheries – Perspectives from the recreational, commercial and subsistence sectors from around the globe. Pages 467-505 in G.P. Closs, M. Krkosek and J.D. Olden, Eds. Conservation of Freshwater Fishes. Cambridge University Press, Cambridge.
Stevens, E.D., R. Arlinghaus, H. Browman, S.J. Cooke, I.G. Cowx, B.K. Diggles, B. Key, J.D. Rose, W. Sawynok, A. Schwab, A.B. Skiftesvik, C.A. Watson and C.D.L. Wynne. 2016. Stress is not pain. Comment on Elwood and Adams (2015) Electric shock causes physiological stress responses in shore crabs, consistent with prediction of pain. Biology Letters. 12:20151006. doi:10.1098/rsbl.2015.1006.
Crawford, C., J.D. Midwood, R.J. Lennox, S. Bliss, C. Belanger and S.J. Cooke. In Press. Experimental displacement of longnose dace, Rhinichthys cataractae (Actinopterygii, Cyprinidae), reveals rapid fish avoidance of a stormwater drain in an urban watershed. Hydrobiologia. 767:197-206.
Cooke, S.J. 2016. Spinning our wheels and deepening the divide: Call for an evidence-based approach to the fish pain debate. Animal Sentience. 2016.072.
Killen, S.S., B. Adriaenssens, S. Marras, G. Claireaux and S.J. Cooke. 2016. Context-dependency of trait repeatability and its relevance for management and conservation of fish populations. Conservation Physiology. 4:10.1093/conphys/cow007.
Hatry, C., J.D. Thiem, D. Hatin, P. Dumont, K.E. Smokorowski and S.J. Cooke. 2016. Fishway approach behaviour and passage of three redhorse species (Moxostoma anisurum, M. carinatum, and M. macrolepidotum) in the Richelieu River, Quebec. Environmental Biology of Fishes. 99:249-263.
Cooke, S.J., V.M. Nguyen, A.D.M. Wilson, M.R. Donaldson, A. Gallagher, N. Hammerschlag and N.R. Haddaway. 2016. The need for speed in a crisis discipline: perspectives on peer review duration and implications for conservation science. Endangered Species Research. 30:11-18. doi: 10.3354/esr00721
Cooke, S.J., A.D.M. Wilson, C.K. Elvidge, R.J. Lennox, N. Jepsen, A.H. Colotelo and R.S. Brown. 2016. Ten practical realities for Institutional Animal Care and Use Committees when evaluating protocols dealing with fish in the field. Reviews in Fish Biology and Fisheries. 26: 123-133.
Cooke, S.J., Z.S. Hogan, P.A. Butcher, M.J.W. Stokesbury, R. Raghavan, A.J. Gallagher, N. Hammerschlag and A.J. Danylchuk. In Press. Angling for endangered fish: Conservation problem or conservation action? Fish and Fisheries. 17: 249-265.
Horodysky, A.Z., S.J. Cooke, J.E. Graves and R.W. Brill. 2016. Fisheries conservation on the high seas: Linking conservation physiology and fisheries ecology for the management of large pelagic fishes. Conservation Physiology. 4:10.1093/conphys/cov059.
Crossin, G.T., O.P. Love, S.J. Cooke and T.D. Williams. 2016. Glucocorticoid manipulations in free-living animals: considerations of dose delivery, life-history context, and reproductive state. Functional Ecology. 30:116-125. doi: 10.1111/1365-2435.12482.
King, G.D., J.M. Chapman, S.J. Cooke and C.D. Suski. 2016. Stress in the neighborhood: Tissue glucocorticoids relative to stream quality for five species of fish. Science of the Total Environment. 547:87-94.
King, G.D., J.M. Chapman, J.D. Midwood, S.J. Cooke and C.D. Suski. 2016. Watershed-scale land use activities influence the physiological condition of stream fish. Physiological and Biochemical Zoology. 89:10-25.
Filguiera, R., J.M. Chapman, C.D. Suski, and S.J. Cooke. 2016. The influence of watershed land use cover on stream fish diversity and size-at-age of a generalist fish. Ecological Indicators. 60: 248-257.
Veilleux, M.A.N., N.W.R. Lapointe, D.M. Webber, T.R. Binder, P.J. Blanchfield, L. Cruz-Font, M.G. Wells, M.H. Larsen, S.E. Doka and S.J. Cooke. 2016. Pressure sensor calibrations of acoustic telemetry transmitters. Journal of Animal Biotelemetry. 4:3. DOI 10.1186/s40317-015-0093-0.
Bower, S.D., A.J. Danylchuk, J.W. Brownscombe, J.D Thiem, and S.J. Cooke. 2016. Evaluating consequences of catch-and-release angling on the physiological status of peacock bass (Cichla ocellaris) in Puerto Rico: A rapid assessment approach. Fisheries Research. 175:95-102. dx.doi.org/10.1016/j.fishres.2015.11.014
Belanger, C.B., M.N. Vera-Chang, T.W. Moon, J.D. Midwood, C.D. Suski and S.J. Cooke. 2016. Seasonal variation in baseline and maximum whole-body glucocorticoid concentrations in a small-bodied stream fish independent of habitat quality. Comparative Biochemistry and Physiology A. 192:1-6. dx.doi.org/10.1016/j.cbpa.2015.10.027.
Madliger, C.L., S.J. Cooke, E.J. Crespi, J.L. Funk, K.R. Hultine, K.E. Hunt, J.R. Rohr, B.J. Sinclair, C.D. Suski, C.K.R. Willis and O.P. Love. 2016. Success stories and emerging themes in conservation physiology. Conservation Physiology. 4:DOI: 10.1093/conphys/cov057.
Hlevca, B., S.J. Cooke, J.D. Midwood, S.E. Doka, R. Portiss and M. Wells. 2015. Characterization of water temperature variability within a harbour connected to a large lake. Journal of Great Lakes Research. 41:1010-1023.
Wilson, A.D.M., J.W. Brownscombe, J. Krause, S. Krause, L. Gutowsky, E. Brooks, and S.J.Cooke. 2015. Integrating advances in network analysis, sensor tags and observation to understand shark ecology and behaviour. Behavioral Ecology. 26:1577-1586. doi:10.1093/beheco/arv115.
Dufour, K., L.F.G. Gutowsky, D. Algera, A. Zolderdo, J.M.T. Magel, N. Pleizier, M. Dick and S.J. Cooke. 2015. An experimental test of in-season homing mechanisms used by nest-guarding male Largemouth Bass following displacement. Behavioural Processes. 120:87-93.
Lawrence, M.J., H.L.J. Stemberger, A.J. Zolderdo, D.P. Struthers and S.J. Cooke. 2015 The effects of modern war and military activities on biodiversity and the environment. Environmental Reviews. 23:443-460. dx.doi.org/10.1139/er-2015-0039.
Gutowsky, L.F.G., P.M. Harrison, E.G. Martins, A. Leake, D.A. Patterson, M. Power and S.J. Cooke. 2015. Interactive effects of sex and body size on adfluvial bull trout (Salvelinus confluentus) movement ecology. Canadian Journal of Zoology. 94:31-40. dx.doi.org/10.1139/cjz-2015-0104.
Gallagher, A.J., S.J. Cooke, and N. Hammerschlag. 2015467. Risk perceptions and conservation ethic among recreational anglers targeting threatened sharks in the subtropical Atlantic. Endangered Species Research. 29: 81-93 doi: 10.3354/esr00704.
Murchie, K.J., S. Clark Danylchuk, A.J. Danylchuk, and S.J. Cooke. 2015. Fish community and habitat assessments of three adjacent tidal creeks on Cape Eleuthera, The Bahamas. Pages 67-80 in K.J. Murchie and P.P. Daneshgar (Eds.), Proceedings of the Second International Symposium on Mangroves as Fish Habitat. Mazatlán, Mexico. American Fisheries Society, Bethesda, Maryland.
Midwood, J.D., J.M. Chapman, M. Cvetkovic, G.D. King, T.D. Ward, S.J. Cooke, and C.D. Suski. 2015. Diel variability in fish assemblage in coastal wetlands and tributaries of the St. Lawrence River: A cautionary tale for fisheries monitoring. Aquatic Sciences. DOI:10.1007/s00027-015-0422-7.
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Landsman, S.J., E.G. Martins, L.F.G. Gutowsky, C.D. Suski, R. Arlinghaus and S.J. Cooke. 2015. Locomotor activity patterns of muskellunge (Esox masquinongy) assessed using tri-axial acceleration sensing acoustic transmitters. Environmental Biology of Fishes. 98:2109-2121.
Nowell, L.B., J.W. Brownscombe, L.F.G. Gutowsky, K.J. Murchie, C.D. Suski, A.J. Danylchuk, A. Shultz and S.J. Cooke. 2015. Swimming energetics and thermal ecology of adult bonefish (Albula vulpes): A combined laboratory and field study in Eleuthera, The Bahamas. Environmental Biology of Fishes 98:2133-2146.
Brownscombe, J.W., L. Griffin, T. Gagne, C.R. Haak, S.J. Cooke and A.J. Danylchuk. 2015. Physiological stress and reflex impairment of recreationally angled bonefish in Puerto Rico. Environmental Biology of Fishes. 98:2287-2295.
Adams, A.J., and S.J. Cooke. 2015. Advancing the science and management of flats fisheries for bonefish, tarpon, and permit. Environmental Biology of Fishes. 98:2123-2131.
Murchie, K.J., A.D. Shultz, J.A. Stein, S.J. Cooke, J. Lewis, J. Franklin, G. Vincent, E.J. Brooks, J.E. Claussen and D.P. Philipp. 2015. Defining adult bonefish (Albula vulpes) movement corridors around Grand Bahama in the Bahamian Archipelago. Environmental Biology of Fishes. 98:2203-2212.
Cooke, S.J., R. Arlinghaus, B.M. Johnson, and I.G. Cowx. 2015. Recreational fisheries in inland waters. Pages 449-465 in J. Craig, editor. Freshwater Fisheries Ecology. Blackwell Science, UK.
Arlinghaus, R., K. Lorenzen, B.M. Johnson, S.J. Cooke, and I.G. Cowx. 2015. Managing freshwater fisheries: addressing habitat, people and fish. Pages 557-579 in J. Craig, editor. Freshwater Fisheries Ecology. Blackwell Science, UK.
Peat, T. B., T. A. Hayden, L. F. G. Gutowsky, C. S. Vandergoot, D. G. Fielder, C. P. Madenjian, K. J. Murchie, J. M. Dettmers, C. C. Krueger, and S. J. Cooke. 2015. Seasonal thermal ecology of adult walleye (Sander vitreus) in Lake Huron and Lake Erie. Journal of Thermal Biology. 53:98-106.
Midwood, J.D., M.H. Larsen, M. Boel, K. Aarestrup and S.J. Cooke. 2015. An experimental field evaluation of winter carryover effects in semi-anadromous brown trout (Salmo trutta). Journal of Experimental Zoology A. 323A:645–654.
Nguyen, V.M., N.R. Haddaway, L.F.G. Gutowsky, A.D.M. Wilson, A.J. Gallagher, M.R. Donaldson, N. Hammerschlag and S.J. Cooke. 2015. How long is too long in contemporary peer review? Perspectives from authors publishing in conservation biology journals. PLoS ONE. 10(8): e0132557.
Drenner, S.M., S.G. Hinch. E.G. Martins, N. Furey, T.D. Clarke, S.J.Cooke, D. Patterson, D. Robichaud, D.W. Welch. A.P. Farrell and R. Thomson. 2015. Environmental conditions and physiological state influence estuarine movements of homing sockeye salmon. Fisheries Oceanography. 24: 307–324.
Struthers, D.P., A.J. Danylchuk, A.D.M. Wilson and S.J. Cooke. 2015. Action cameras: Bringing aquatic and fisheries research into view. Fisheries. DOI: 10.1080/03632415.2015.1082472.
Raby, G.D., S.G. Hinch, D.A. Patterson, J.A. Hills, L.A. Thompson, and S.J. Cooke. 2015. Mechanisms to explain purse seine bycatch mortality of coho salmon. Ecological Applications. 25: 1757-1775.
Raby, G.D., M.R. Donaldson, S.G. Hinch, T.D. Clark, E.J. Eliason, K.M. Jeffries, K.V. Cook, A. Teffer, A.L. Bass, K.M. Miller, D.A. Patterson, A.P. Farrell and S.J. Cooke. 2015. Fishing for effective conservation: context and biotic variation are keys to understanding the survival of Pacific salmon after catch-and-release. Integrative and Comparative Biology. 55: 554-576.
Pleizier, N., A.D.M. Wilson, A.D. Shultz and S.J. Cooke. 2015. Puffed and bothered: personality, performance, and the effects of stress on checkered pufferfish. Physiology and Behavior. 152: 68-78.
O’Connor, C.M., and S.J. Cooke. 2015. Ecological carryover effects complicate conservation. Ambio. 44:582-591.
Handley, G., C.M. Frantz, P.M. Kocovsky, D.R. DeVries, S.J. Cooke and J. Claussen. 2015. An examination of gender differences in the American Fisheries Society peer review process. Fisheries. 40:442-451.
Cook, K.V., R.J. Lennox, S.G. Hinch, and S.J. Cooke. 2015. Fish out of water: How much air is too much? Fisheries. 40:452-461.
Cooke, S.J., J.M. Chapman and J.C. Vermaire. 2015. On the apparent failure of silt fences to protect freshwater ecosystems from sedimentation: a call for improvements in science, technology, training and compliance monitoring. Journal of Environmental Management. 164:67-73.
Philipp, D.P., J.E. Claussen, J.B. Koppelman, J.A. Stein, S.J. Cooke, C.D. Suski, D.H. Wahl, D.A.H. Sutter, and R. Arlinghaus. 2015. Fisheries-induced evolution in largemouth bass – linking vulnerability to angling, parental care, and fitness. American Fisheries Society Symposium. 82:223–234.
Horodysky, A.Z., S.J. Cooke and R.W. Brill. 2015. Physiology in the Service of Fisheries Science – Why Thinking Mechanistically Matters. Reviews in Fish Biology and Fisheries. 25:425-447.
Sopinka, N.M., L.D. Patterson, J.C. Redfern, N. Pleizier, C. Belanger, J.D. Midwood, G.T. Crossin and S.J. Cooke. 2015. Manipulating glucocorticoids in wild animals: basic and applied perspectives. Conservation Physiology. 3(1): cov031 doi:10.1093/conphys/cov031
Gupta, N., S.D. Bower, R. Raghavan, A.J. Danylchuk, and S.J. Cooke. 2015. Status of recreational fisheries in India: development, issues and opportunities. Reviews in Fisheries Science and Aquaculture. 23:291-301.
Lennox, R.J., J.W. Brownscombe, S.J. Cooke, A.J. Danylchuk, P.S. Moro, E.A. Sanches, and D. Garonne-Neto. 2015. Evaluation of catch-and-release angling practices for the fat snook Centropomus parallelus in a Brazilian estuary. Ocean and Coastal Management. 113:1-7.
Havn, T.B., I. Uglem, Ø. Solem, S.J. Cooke, F.G. Whoriskey and E.B. Thorstad. 2015. The effect of catch-and-release angling at high water temperatures on behavior and survival of Atlantic salmon during spawning migration. Journal of Fish Biology. 87:342–359.
Midwood, J.D., S.J. Kerr, P. Levick and S.J. Cooke. 2015. Muskellunge science and management: progress through partnerships. Environmental Biology of Fishes. 98:2031-2035.
Lennox R.J., K. Choi, P.M. Harrison, J.E. Paterson, T. Peat, T. Ward, and S.J. Cooke. 2015. Improving science-based invasive species management with physiological knowledge, concepts, and tools. Biological Invasions. 17:2213-2227.
Gallagher, A.J., N. Hammerschlag, S.J. Cooke, D.P. Costa and D.J. Irschick. 2015. One size doesn’t always fit all: A reply to Stroud and Feeley. Trends in Ecology and Evolution. 30:297–298.
Wilson, A.D.M., M. Wikelski, R.P. Wilson and S.J. Cooke. 2015. Utility of biological sensor tags in animal conservation. Conservation Biology. 29:1065–1075.
Maitland, B.M., S.J. Cooke and M. Poesch. 2015. Finding the path to a successful graduate and research career: Advice for early career researchers. Fisheries. 40:399-403.
Wilson, A.D.M., J.W. Brownscombe, B. Sullivan, S.M.R. Jain-Schlaepfer and S.J. Cooke. 2015. Does angling technique and lure type selectively target fishes based on their behavioural type? PLoS ONE. 10: e0135848.
Chapman, J.M., D. Algera, M. Dick, E.E. Hawkins, M.J. Lawrence, R.J. Lennox, A.M. Rous, C.M. Souliere, H.L.J. Stemberger, D.P. Struthers, M. Vu, T.D. Ward, A.J. Zolderdo and S.J. Cooke. 2015. Being relevant: Practical guidance for early career researchers interested in solving conservation problems. Global Ecology and Conservation. 4: 334-348.
Thiem, J.D., J.W. Dawson, A.C. Gleiss, E.G. Martins, A. Haro, T. Castro-Santos, A.J. Danylchuk, R.P. Wilson and S.J. Cooke. 2015. Accelerometer-derived activity correlates with volitional swimming speed in lake sturgeon (Acipenser fulvescens). Canadian Journal of Zoology. 93:645-654.
Rous, A.M., A. Forrest, E. Hart McKittrick, G. Letterio, J. Roszell, T. Wright, and S.J. Cooke. 2015. Orientation and position of fish affects recovery time from electrosedation. Transactions of the American Fisheries Society 144: 820-828.
Moraga, A.D., A.D.M. Wilson and S.J. Cooke. 2015. Does lure colour influence catch per unit effort, fish capture size and hooking injury in angled largemouth bass? Fisheries Research 172: 1-6.
Philipp, D.P., J.E. Claussen, J.B. Koppelman, J.A. Stein, S.J. Cooke, C.D. Suski, D.H. Wahl, D.A. Sutter, R. Arlinghaus. 2015. Fisheries-Induced Evolution in Largemouth Bass: Linking Vulnerability to Angling, Parental Care, and Fitness. American Fisheries Society Symposium 82: 223-234.
Hussey, N.E., S.T. Kessel, K. Aarestrup, S.J. Cooke, P.D. Cowley, A.T. Fisk, R.G. Harcourt, K.N. Holland, S.J. Iverson, J.F. Kocik, J.E. Mills Flemming and F.G. Whoriskey. In Press. Aquatic animal telemetry: a panoramic window into the underwater world. Science DOI: 10.1126/science.1255642
Robinson, K.A., S.G. Hinch, G.D. Raby, M.R. Donaldson, D. Robichaud, D.A. Patterson, and S.J. Cooke. 2015. Influence of post-capture ventilation assistance on migration success of adult sockeye salmon following capture and release. Transactions of the American Fisheries Society 144: 693-704.
Raby, G.D., T.D. Clark, A.P. Farrell, D.A. Patterson, N.N. Bett, S.M. Wilson, W.G. Willmore, Cory D. Suski, S.G. Hinch and S.J. Cooke. 2015. Facing the river gauntlet: understanding the effects of fisheries capture and water temperature on the physiology of coho salmon. PLoS One 10:e0124023.
Chapman, J.M., D.J. Marcogliese, C.D. Suski, and S.J. Cooke. 2015. Variation in parasite communities and health indices of juvenile Lepomis gibbosus across a gradient of watershed land-use and habitat quality. Ecological Indicators doi:10.1016/j.ecolind.2015.05.013
Brownscombe, J.W., A.D.M. Wilson, E. Samson, L. Nowell, S.J. Cooke and A.J. Danylchuk. 2015. Individual differences in activity and habitat selection of juvenile queen conch evaluated using acceleration biologgers. Endangered Species Research 27: 181-188.
Raby, G.D., S.M. Wilson, D.A. Patterson, S.G. Hinch, T.D. Clark, A.P. Farrell, and S.J. Cooke. 2015. A physiological comparison of three techniques for reviving sockeye salmon exposed to a severe capture stressor during upriver migration. Conservation Physiology doi:10.1093/conphys/cov015
Silva, A.T., C. Hatry, J.D. Thiem, L.F.G. Gutowsky, D. Hatin, D.Z. Zhu, J.W. Dawson, C. Katopodis and S.J. Cooke. 2015. Behaviour and locomotor activity of a migratory catostomid during fishway passage. PLoS One doi: 10.1371/journal.pone.0123051
Binder, T.R., C.M. O’Connor, S.H. McConnachie, S.M. Wilson, M.A. Nannini, D.H. Wahl and S.J. Cooke. 2015. Is winter worse for stressed fish? The consequences of exogenous cortisol manipulation on over-winter survival and condition of juvenile largemouth bass. Comparative Biochemistry and Physiology A 187: 97-102.
Jeffrey, J.D., C.T. Hasler, J.M. Chapman, S.J. Cooke, and C.D. Suski. 2015. Linking landscape-scale disturbances to stress and condition of fish: Implications for restoration and conservation. Integrative and Comparative Biology DOI: 10.1093/icb/icv022
Lennox, R. J., Uglem, I., Cooke, S. J., Næsje, T., Whoriskey, F. G., Havn, T. B., Ulvan, E. M., Solem, Ø., Thorstad, E. B. 2015. Does catch-and-release angling alter the behavior and fate of adult Altantic Salmon during upriver migration? Transactions of the American Fisheries Society. 144:2, 400-409.
Cooke, S.J., and J.C. Vermaire. 2015. Environmental studies and environmental science today: inevitable mission creep and integration in action-oriented transdisciplinary areas of inquiry, training and practice. Journal of Environmental Studies and Sciences. 5:70-78.
Harrison,P.M., L.F.G. Gutowsky, E.G. Martins, D.A. Patterson, S.J. Cooke and M. Power. 2015. Personality-dependent spatial ecology occurs independently from dispersal in wild burbot (Lota lota). Behavioral Ecology 26:483-492.
Cull, F., C.M. O’Connor, C.D. Suski, A.D. Shultz, A.J. Danylchuk and S.J. Cooke. 2015. Puff and bite: The relationship between the glucocorticoid stress response and anti-predator performance in checkered puffer (Sphoeroides testudineus). General and Comparative Endocrinology 214:1-8.
Midwood, J.D., N.A. Cairns, L.J. Stoot, S.J. Cooke, and G. Blouin-Demers. 2015. Bycatch mortality can cause extirpation of four freshwater turtle species. Aquatic Conservation: Marine and Freshwater Ecosystems. 25: 71-80.
Pleizier, N., L.F.G. Gutowsky, V.M. Peddemors, S.J. Cooke and P.A. Butcher. 2015. Variation in whole-, landed- and trimmed-carcass and fin-weight ratios for various sharks captured on demersal set-lines off eastern Australia. Fisheries Research. 167:190-198.
Taylor, J.J., S.M. Wilson, N.M. Sopinka, S.G. Hinch, D.A. Patterson, S.J. Cooke and W.G. Willmore. 2015. Are there intergenerational and population-specific effects of oxidative stress in sockeye salmon (Oncorhynchus nerka)? Comparative Biochemistry and Physiology A. 184:97-104.
Gutowsky, L.F.G., W. Aslam, R. Banisaeed, L.R. Bell, K.L. Bove, J.W. Brownscombe, G.J.J. Burrows, E. Chu, J.M.T. Magel, A.M. Rous, and S.J. Cooke. 2015. Considerations for the design and interpretation of fishing release mortality estimates. Fisheries Research 167:64-70.
Cooke, S.J., and K.J. Murchie. 2015. Status of aboriginal, commercial and recreational inland fisheries in North America: past, present and future. Fisheries Management and Ecology 22: 1-111.
Gallagher, A.J., N. Hammerschlag, S.J. Cooke, D.P. Costa, and D.J. Irschick. 2015. Evolutionary theory as a tool for predicting extinction risk. Trends in Ecology and Evolution 30:61-65.
Lennox, R. J., K. Whoriskey, G. T. Crossin, and S. J. Cooke. 2015. Influence of angler hook-set behaviour relative to hook type on capture success and incidences of deep hooking and injury in a teleost fish. Fisheries Research 164: 201-205.
Shiffman, D.S., A.J. Gallagher, J. Wester, C.C. Macdonald, A.D. Thaler, S.J. Cooke, and N. Hammerschlag. 2015. A letter of clarification from the authors of “trophy fishing for species threatened with extinction”. Marine Policy 53: 213-214.
Tuor, K.M.F., K.E. Smokorowski and S.J. Cooke. 2015. The influence of fluctuating ramping rates on the diets of small-bodied fish species of boreal rivers. Environmental Biology of Fishes 98:345-355.
Cull, F., C.D. Suski, A. Shultz, A.J. Danylchuk, C.M. O’Connor, K.J. Murchie and S.J. Cooke. 2015. Consequences of experimental cortisol manipulations on the thermal biology of the checkered puffer (Sphoeroides testudineus) in laboratory and field environments. Journal of Thermal Biology 47:63-74.
Bliss, S.M., J.D. Midwood, K.M. Stamplecoskie and S.J. Cooke. 2015. Seasonal movements and residency of small-bodied fish in a north temperate urban watershed demonstrate connectivity between a stream and stormwater drain. Hydrobiologia 742:327-338.
Hammerschlag, N., S.J. Cooke, A.J. Gallagher and B.J. Godley. 2014. Considering the fate of electronic tags: user responsibility and interactions with stakeholders and other scientists when encountering tagged aquatic animals. Methods in Ecology and Evolution 11:1147-1153.
Cooke, S.J. 2014. Making way for migratory fish. Book review of Running Silver: Restoring Atlantic Rivers and Their Great Fish Migrations. John Waldman. Lyons Press. BioScience 64:1053-1054.
Burnett, N.J., S.G. Hinch, D.C. Braun, M.T. Casselman, C.T. Middleton, S.M Wilson, and S.J. Cooke. 2014. Burst swimming in areas of high flow: delayed consequences of anaerobiosis in wild adult sockeye salmon. Physiological and Biochemical Zoology 87:587-598.
Samson, E., J.W. Brownscombe and S.J. Cooke. 2014. Behavioural and reflex responses of mottled mojarra Eucinostomus lefroyi (Gerreidae) to cold shock exposure. Aquatic Biology. 23: 101-108.
Hayden, T.A., C.M. Holbrook, D. Fielder, C.S. Vandergoot, R.A. Bergstedt, J.M. Dettmers, C.C. Krueger and S.J. Cooke. 2014. Acoustic telemetry reveals large-scale migration patterns for walleye in Lake Huron. PLoS One DOI:10.1371/journal.pone.0114833
Brownscombe, J.W., K. Marchand, K. Tisshaw, V. Fewster, O. Groff, M. Pichette, M. Seed, L.F.G. Gutowsky, A.D.M. Wilson and S.J. Cooke. 2014. The influence of water temperature and accelerometer-determined fight intensity on physiological stress and reflex impairment of angled largemouth bass. Conservation Physiology DOI: 10.1093/conphys/cou057
Donaldson, M.R., S.G. Hinch, C.D. Suski, A.T. Fisk, M.R. Heupel and S.J. Cooke. 2014. Making connections in aquatic ecosystems with acoustic telemetry monitoring. Frontiers in Ecology and Environment 12: 565–573.
Stein, J.A., J.E. Claussen, S.J. Cooke and D.P. Philipp. 2014. Not all biases are created equal: A comment on Snorkel survey bias observed by Hessenauer et al. 2014. North American Journal of Fisheries Management 34:1204-1206.
Finn, J.T., J.W. Brownscombe, C.R. Haak, S.J. Cooke, R. Cormier, T. Gagne, and A.J. Danylchuk. 2014. Applying network methods to acoustic telemetry data: modeling the movements of tropical marine fishes. Ecological Modelling 293: 139-149.
Schwabe, M., T. Meinelt, T.M. Phan, S.J. Cooke and R. Arlinghaus. 2014. Absence of handling-induced Saprolegnian infection in juvenile Rainbow Trout Oncorhynchus mykiss, with implications for catch-and-release angling. North American Journal of Fisheries Management 34:1221-1226.
Halliday, W.D., J.E. Paterson, L.D. Patterson, S.J. Cooke and G. Blouin-Demers. 2014. Testosterone, body size, and sexual signals predict parasite load in Yarrow’s spiny lizards (Sceloporus jarrovii). Canadian Journal of Zoology 92: 1075-1082.
Cooke, S.J., M.R. Donaldson, and T.D. Clark. 2014. Practical guidance for early career researchers dealing with tardy or unresponsive co-authors. Ideas in Evolution and Ecology 7: 73-76.
Bower, S.D., R.J. Lennox and S.J. Cooke. 2014. Is there a role for freshwater protected areas in the conservation of migratory fish? Inland Waters 5: 1-6.
Cooke, S.J., R. Arlinghaus, D. M. Bartley, T.D. Beard, I.G. Cowx, T.E. Essington, O.P. Jensen, A. Lynch, W.W. Taylor, and R. Watson. 2014. Where the waters meet: Sharing ideas and experiences between inland and marine realms to promote sustainable fisheries management. Canadian Journal of Fisheries and Aquatic Sciences 71: 1593-1601. (Invited paper arising from S. Cooke’s J.C. Stevenson Lectureship at CCFFR in Windsor in 2013)
Raby, G.D., M.R. Donaldson, V.M. Nguyen, M.K. Taylor, N.M. Sopinka, K.V. Cook, D.A. Patterson, D. Robichaud, S.G. Hinch, and S.J. Cooke. 2014. Bycatch mortality of endangered coho salmon: impacts, solutions, and aboriginal perspectives. Ecological Applications 24: 1803-1819.
Coristine, L.E., C.M. Robillard, J.T. Kerr, C.M. O’Connor, D. Lapointe and S.J. Cooke. 2014. A conceptual framework for the emerging discipline of conservation physiology. Conservation Physiology DOI: 10.1093/conphys/cou033
Martins, E.G., L.F.G. Gutowsky, P.M Harrison, J.E. Mills Flemming, I.D. Jonsen, D.Z. Zhu, A. Leake, D.A. Patterson, M. Power and S.J. Cooke. 2014. Behavioral attributes of turbine entrainment risk for adult resident fish revealed by acoustic telemetry and state-space modeling. Journal of Animal Biotelemetry 2: 13.
Miller, K.M., A. Teffer, S. Tucker, S. Li, A.D. Schulze, M. Trudel, F. Juanes, A. Tabata, K.H. Kaukinen, N.G. Ginther, T.J. Ming, S.J. Cooke, M. Hipfner, D.A. Patterson, and S.G. Hinch. 2014. Infectious disease, shifting climates and opportunistic predators: cumulative factors potentially impacting wild salmon declines. Evolutionary Applications 7: 812-855.
Bower, S.D., Nguyen, V.M., Danylchuk, A.J., Beard Jr., T.D., and S.J. Cooke. 2014. Inter-sectoral conflict and recreational fisheries of the developing world: Opportunities and challenges for co-operation. In: McConney, P., R. Medeiros and M. Pena. Eds. 2014. Enhancing Stewardship in Small-Scale Fisheries: Practices and Perspectives. Too Big To Ignore (TBTI) and Centre for Resource Management and Environmental Studies, The University of the West Indies, Cave Hill Campus, Barbados. CERMES Technical Report No. 73.
Taylor, M.K., C.T. Hasler, S.G. Hinch, B. Lewis, D.C. Schmidt and S.J. Cooke. 2014. Reach-scale movements of bull trout (Salvelinus confluentus) relative to hydropeaking operations in the Columbia River, Canada. Ecohydrology 7: 1079-1086.
Burnett, N.J., S.G. Hinch, M.R. Donaldson, N.B. Furey, D.A. Patterson, D.W. Roscoe, and S.J. Cooke. 2014. Alterations to dam-spill discharge influence sex-specific activity, behaviour and passage success of migrating adult sockeye salmon. Ecohydrology 7: 1094-1104.
Shiffman, D.S., A.J. Gallagher, J. Wester, C. Macdonald, A.D. Thaler, S.J. Cooke and N. Hammerschlag. 2014. Trophy fishing for species threatened with extinction: a way forward building on a history of conservation. Marine Policy 50: 318-322.
Brownscombe, J.W., L.F. Gutowsky, A.J. Danylchuk and S.J. Cooke. 2014. Foraging behaviour and activity of a marine benthivorous fish estimated using tri-axial accelerometer biologgers. Marine Ecology Progress Series 505: 241-251.
Gale, M.K., S.G. Hinch, S.J. Cooke, M.R. Donaldson, E.J. Eliason, K.M. Jeffries, E.G. Martins and D.A. Patterson. 2014. Observable impairments predict mortality of captured and released sockeye salmon at various temperatures. Conservation Physiology DOI: 10.1093/conphys/cou029
Taylor, M.K., C.T. Hasler, C.S. Findlay, B. Lewis, D.C. Schmidt, S.G. Hinch and S.J. Cooke. 2014. Hydrologic correlates of bull trout (Salvelinus confluentus) swimming activity in a hydropeaking river. River Research and Applications 30: 756-765.
Colotelo, A.H., S.J. Cooke, K. Smokorowski, and T. Haxton. 2014. Comparative evaluation of four presumptive tests for blood to detect epithelial injury on fish. Journal of Fish and Wildlife Management 5: 26-34.
Taylor, M.K., and S.J. Cooke. 2014. Repeatability of movement behaviour in a wild salmonid revealed by telemetry. Journal of Fish Biology 84: 1240 -1246.
Donaldson, M.R., S.G. Hinch, K.M. Jeffries, D.A. Patterson, S.J. Cooke, A.P. Farrell, and K.M. Miller. 2014. Species- and sex-specific responses and recovery of wild, mature Pacific salmon to an exhaustive exercise and air-exposure stressor. Comparative Biochemistry and Physiology A 173: 16-23.
Szekeres, P., J.W. Brownscombe, F. Cull, A.J. Danylchuk, A.D. Shultz, C.D. Suski, K.J. Murchie and S.J. Cooke. 2014. Physiological and behavioural consequences of cold shock on bonefish (Albula vulpes) in The Bahamas. Journal of Experimental Marine Biology and Ecology 459: 1-7.
Jeffrey, J.D., S.J. Cooke and K.M. Gilmour. 2014. Regulation of hypothalamic-pituitary-
Jepsen, N., K. Aarestrup and S.J. Cooke. 2014. Tagging fish in the field: ethical and procedural considerations. A comment on the recent paper of D. Mulcahy; Legal, ethical and procedural bases for the use of aseptic techniques to implant electronic devices. Journal of Fish and Wildlife Management 4: 211-219.
Cooke, S.J. 2014. Reject, Revise, and Resubmit… Please. Ideas in Ecology and Evolution 7: 62-63.
Cooke, S.J., and C.M. O’Connor. 2014. Mentors matter: strategies for selecting the right mentor. Pages 15-21 in W. Taylor, A. Lynch and N. Leonard, Eds. Future of Fisheries: Perspectives for the Next Generation of Professionals. American Fisheries Society, Bethesda, MD.
Raby, G.D., J.R. Packer, A.J. Danylchuk, and S.J. Cooke. 2014. The understudied and underappreciated role of predation in the mortality of fish released from fishing gears. Fish and Fisheries 15: 489-505.
Cooke, S.J., S.S. Killen, J.D. Metcalfe, D.J. McKenzie, D. Mouillot, C. Jørgensen and M.A. Peck. 2014. Conservation physiology across scales: Insights from the marine realm. Conservation Physiology DOI:10.1093/conphys/cou024
Brownscombe, J.W., S.D. Bower, W. Bowden, L. Nowell, J.D. Midwood, N. Johnson and S.J. Cooke. 2014. Canadian recreational fisheries: 35 years of social, biological, and economic dynamics from a national survey. Fisheries 39: 251-260.
Cook, K.V., G.T. Crossin, D.A. Patterson, S.G. Hinch, K.M. Gilmour and S.J. Cooke. 2014. The stress response predicts migration failure but not migration rate in a semelparous fish. General and Comparative Endocrinology 202: 44-49.
Cousineau, A., J.D. Midwood, K. Stamplecoskie, G. King, C.D. Suski, and S.J. Cooke. 2014. Diel patterns of baseline glucocorticoids and stress responsiveness in a teleost fish. Canadian Journal of Zoology 92: 417-421.
Brownscombe, J.W., L. Nowell, E. Samson, A.J. Danylchuk, and S.J. Cooke. 2014. Fishing-related stressors inhibit refuge-seeking behavior in released sub-adult great barracuda, Sphyraena barracuda. Transactions of the American Fisheries Society 143: 613-617.
Stoot, L.J., N.A. Cairns, F. Cull, J.J. Taylor, J.D. Jeffrey, F. Morin, J.W. Mandelman, T.D. Clark and S.J. Cooke. 2014. Use of portable blood physiology point-of-care devices for basic and applied research on vertebrates – a review. Conservation Physiology DOI: 10.1093/conphys/cou011
Chapman, J.M., C.L. Proulx, M.A.N. Veilleux, C. Levert, S. Bliss, M-È. André, N.W.R. Lapointe and S.J. Cooke. 2014. Clear as mud: A meta-analysis on the effects of sedimentation on freshwater fish and the effectiveness of sediment control measures. Water Research 56: 190-202.
Wilson, S.M., J.J. Taylor, T.A. Mackie, D.A. Patterson, S.J. Cooke, and W.G. Willmore. 2014. Oxidative stress in Pacific salmon (Oncorhynchus spp.) during spawning migration. Physiological and Biochemical Zoology 87: 346-352.
Hasler, C.T., E. Guimond, B. Mossop, S.G. Hinch, and S.J. Cooke. 2014. Effectiveness of pulse flows in a regulated river for inducing upstream movement of an imperiled stock of Chinook salmon. Aquatic Sciences 76: 231-241.
O’Connor, C.M., D.R. Norris, G.T. Crossin and S.J. Cooke. 2014. Biological carryover effects: linking common concepts and mechanisms in ecology and evolution. Ecosphere 5(3): article 28 DOI: 10.1890/ES13-00388.1
Rapp, T., J. Hallermann, S.J. Cooke, S.K. Hetz, S. Wuertz and R. Arlinghaus. 2014. Consequences of air exposure on the physiology and behavior of caught-and-released Common Carp in the laboratory and under natural conditions. North American Journal of Fisheries Management 34: 232-246.
Lennox, R., and S.J. Cooke. 2014. State of the interface between conservation and physiology: a bibliometric analysis. Conservation Physiology DOI: 10.1093/conphys/cou003
Muhametsafina, A., J.D. Midwood, S.M. Bliss, K.M. Stamplecoskie and S.J. Cooke. 2014. The fate of dead fish tagged with biotelemetry transmitters in an urban stream. Aquatic Ecology 48: 23-33.
Kessel S. T., S.J. Cooke, M.R. Heupel, N.E. Hussey, C.A. Simpfendorfer, S. Vagle, and A.T. Fisk. 2014. A review of detection range testing in aquatic passive acoustic telemetry studies. Reviews in Fish Biology and Fisheries 24: 199-218.
Danylchuk, A.J., C.D. Suski, J.W. Mandelman, K.J. Murchie, C.R. Haak, A.M.L. Brooks and S.J. Cooke. 2014. Hooking injury, physiological status, and short-term mortality following catch-and-release recreational angling of juvenile lemon sharks (Negaprion bevirostris) in The Bahamas. Conservation Physiology DOI: 10.1093/conphys/cot036
Wilson, S.M., G.D. Raby, N.J. Burnett, S.G. Hinch, and S.J. Cooke. 2014.. Looking beyond the mortality of bycatch: sublethal effects of incidental capture on marine animals. Biological Conservation 171: 61-72.
Cooke, S.J., and M.R. Donaldson. 2014. Self-citation by researchers: narcissism or an inevitable outcome of a cohesive and sustained research program? Ideas in Ecology and Evolution 7: 1-2.
Raison, T., A. Nagrodski, C.D. Suski and S.J. Cooke. 2014. Exploring the potential effects of lost or discarded soft plastic fishing lures on fish and the environment. Water, Air, and Soil Pollution 225: 1869.
Lapointe, N.W.R., S.J. Cooke, J.G. Imhof, D. Boisclair, J.M. Casselman, R.A. Curry, O.E. Langer, R.L. McLaughlin, C.K. Minns, J.R. Post, M. Power, J.B. Rasmussen, J.D. Reynolds, J.S. Richardson, and W.M. Tonn. 2014. Principles for ensuring healthy and productive freshwater ecosystems that support sustainable fisheries. Environmental Reviews 22: 1-25.
Midwood, J.D., Larsen, M.H., Boel, M., Jepsen, N., Aarestrup, K., & Cooke, S.J. 2014. Does cortisol manipulation influence outmigration behaviour, survival and growth of sea trout? A field-test of carryover effects in wild fish. Marine Ecology Progress Series 496: 135-144.
Drenner, S.M., S.G. Hinch, E.G. Martins, D. Robichaud, L.A. Thompson, D.A. Patterson, S.J. Cooke and R.E. Thomson. 2014. Variable thermal experience and diel thermal patterns of homing sockeye salmon in coastal marine waters. Marine Ecology Progress Series 496: 109-124.
Gallagher, A.J., Serafy, J.E., Cooke, S.J., Hammerschlag, N. 2014. Physiological stress response, reflex impairment, and survival of five sympatric shark species following experimental capture and release. Marine Ecology Progress Series 496: 207-218.
Crossin, G.T., S.J. Cooke, J.A. Goldbogen, and R.A. Phillips. 2014. Tracking fitness in marine vertebrates: a review of current knowledge and opportunities for future research. Marine Ecology Progress Series 496: 1-17.
Wilson, S.M., S.G. Hinch, S.M. Drenner, E.G. Martins, N. B. Furey, D. A. Patterson, D.W. Welch, and S.J. Cooke. 2014. Coastal marine and in-river migration behaviour of adult sockeye salmon en route to spawning grounds. Marine Ecology Progress Series 496: 71-84.
Marriner, B.A., A.B.M. Baki, D.Z. Zhu, J.D. Thiem, S.J. Cooke, and C. Katopodis. 2014. Field and numerical assessment of turning pool hydraulics in a vertical slot fishway. Ecological Engineering 63: 88-101.
Cooke, S.J., V. Messmer, A.J. Tobin, M.S. Pratchett, and T.D. Clark. 2014. Refuge-seeking impairments mirror metabolic recovery following fisheries-related stressors in the Spanish flag snapper (Lutjanus carponotatus) on the Great Barrier Reef. Physiological and Biochemical Zoology 87: 136-147.
Cooke, S.J., D.T. Blumstein, R. Buchholz, T. Caro, E. Fernández-Juricic, C.E. Franklin, J. Metcalfe, C.M. O’Connor, C. Cassidy St. Clair, W.J. Sutherland, and M. Wikelski. 2014. Physiology, behaviour and conservation. Physiological and Biochemical Zoology 87: 1-14.
Hatry, C., J.D. Thiem, T.R. Binder, D. Hatin, P. Dumont, K.M. Stamplecoskie, J.M. Molina, K.E. Smokorowski, and S.J. Cooke. 2014.. Comparative physiology and relative swimming performance of three redhorse (Moxostoma spp.) species: associations with fishway passage success. Physiological and Biochemical Zoology 87: 148-159.
Donaldson, M.R. and S.J. Cooke. 2014. Scientific publications: Moving beyond quality and quantity toward influence. BioScience 64: 12-13.
Nguyen, V.M., E.G. Martins, D. Robichaud, G.D. Raby, M.R. Donaldson, A.G. Lotto, W.G. Willmore, D.A. Patterson, A.P. Farrell, S.G. Hinch, and S.J. Cooke. 2014. Disentangling the roles of air exposure, gillnet injury, and facilitated recovery on the post-capture and release mortality and behavior of adult migratory sockeye salmon (Oncorhynchus nerka) in freshwater. Physiological and Biochemical Zoology 87: 125-135. (focused issue on conservation physiology).
Cooke, S.J. 2014. Conservation physiology today and tomorrow. Conservation Physiology DOI: 10.1093/conphys/cot033 (Editorial)
Rose, J.D., R. Arlinghaus, S.J. Cooke, B.K. Diggles, W. Sawynok, E.D. Stevens and C.D.L. Wynne. 2014. Can fish really feel pain? Fish and Fisheries 15: 97-133.
Harrison, P.M., L.F.G. Gutowsky, E.G. Martins, D.A. Patterson, A. Leake, S.J. Cooke, and M. Power. 2013. Diel vertical migration of adult burbot: A dynamic trade-off between feeding opportunity, predation avoidance, and bioenergetic gain. Canadian Journal of Fisheries and Aquatic Sciences 70: 1765-1774.
Cairns, N.A., L.J. Stoot, G. Blouin-Demers, and S.J. Cooke. 2013. Refinement of bycatch reduction devices to exclude freshwater turtles from commercial fishing nets. Endangered Species Research 22: 251-261.
Cooke, S.J., V.M. Nguyen, K.J. Murchie, J.D. Thiem, M.R. Donaldson, S.G. Hinch, R.S. Brown and A. Fisk. 2013. To tag or not to tag: animal welfare, conservation and stakeholder considerations in fish tracking studies that use electronic tags. Journal of International Wildlife Law & Policy 16: 352-374.
Young, N., I. Gingras, V.M. Nguyen, S.J. Cooke, and S.G. Hinch. 2013. Mobilizing new science into management practice: the challenge of biotelemetry for fisheries management, a case study of Canada’s Fraser River. Journal of International Wildlife Law & Policy 16: 331-351.
Martins, E.G., L.F.G. Gutowsky, P.M. Harrison, D.A. Patterson, M. Power, D. Zhu, A. Leake, and S.J. Cooke. 2013. Forebay use and entrainment rates of resident adult fish in a large hydropower reservoir. Aquatic Biology 19: 253-263.
Nguyen, V.M., S.M. Larocque, L.J. Stoot, N.A. Cairns, G. Blouin-Demers, and S.J. Cooke. 2013. Perspectives of fishers on turtle by-catch and conservation strategies in a small-scale inland commercial hoop net fishery. Endangered Species Research 22: 11-22.
Cooke, S.J., C.D. Suski, R. Arlinghaus, and A.J. Danylchuk. 2013. Voluntary institutions and behaviours as alternatives to formal regulations in recreational fisheries management. Fish and Fisheries 14: 439–457.
Eliason, E.J., S.M. Wilson, A.P. Farrell, S.J. Cooke, and S.G. Hinch. 2013. Low cardiac and aerobic scope in a coastal population of sockeye salmon Oncorhynchus nerka with a short upriver migration. Journal of Fish Biology 82: 2104-2112.
VanderZwaag, D.L., R. Apostle, and S.J. Cooke. 2013. Tracking and protecting marine species at risk: scientific advances, sea of governance challenges. Journal of International Wildlife Law & Policy 16: 105-111.
Nguyen, V.M., M.A. Rudd, S.G. Hinch and S.J. Cooke. 2013. Recreational anglers’ attitudes, beliefs, and behaviors related to catch-and-release practices of Pacific salmon in British Columbia. Journal of Environmental Management 128: 852-865.
Cooke, S.J., N.W.R. Lapointe, E.G. Martins, J.D. Thiem, G.D. Raby, M.K. Taylor, T.D. Beard Jr., and I.G. Cowx. 2013. Failure to engage the public in issues related to inland fishes and fisheries: strategies for building public and political will to promote meaningful conservation. Journal of Fish Biology (Special Issue from World Fisheries Congress) 83: 997-1018.
Gutowsky, L.F.G, P.M. Harrison, E.G. Martins, A. Leake, D.A. Patterson, M. Power, and S.J. Cooke. 2013. Diel vertical migration hypotheses explain size-dependent behaviour in a freshwater piscivore. Animal Behaviour 86: 365-373.
Beardsall, J.W., M.F. McLean, S.J. Cooke, B.W. Wilson, M. J. Dadswell and M.J.W. Stokesbury. 2013. Consequences of incidental otter trawl capture on survival and physiological status of threatened Atlantic sturgeon Acipenser oxyrinchus. Transactions of the American Fisheries Society 142: 1202-1214.
Nitychoruk, J.M., L.F.G. Gutowsky, P.M. Harrison, T.J. Hossie, M. Power, and S.J. Cooke. 2013. Sexual and seasonal dimorphism in adult adfluvial bull trout (Salvelinus confluentus). Canadian Journal of Zoology 91: 480-488.
Stoot, L.J., N.A. Cairns, G. Blouin-Demers, and S.J. Cooke. 2013. Physiological disturbances and behavioural impairment associated with the incidental capture of freshwater turtles in a commercial fyke-net fishery. Endangered Species Research 21: 13-23.
Lapointe, N. W. R., J. D. Thiem, S. E. Doka, and S. J. Cooke. 2013. Opportunities for improving aquatic restoration science and monitoring through the use of animal electronic tagging technology. BioScience 63: 390-396.
Colotelo, A.H., S.J. Cooke, G. Blouin-Demers, K.J. Murchie, T. Haxton, and K. Smokorowski. 2013. Influence of water temperature and net tending frequency on the condition of fish bycatch in a small-scale inland commercial fyke net fishery. Journal for Nature Conservation 21: 217-224.
Hatry C., T.R. Binder, J.D. Thiem, C.T. Hasler, K.E. Smokorowski, K.D. Clarke, Katopodis C., S.J. Cooke. 2013. The status of fishways in Canada: trends identified using the national CanFishPass database. Reviews in Fish Biology and Fisheries 23: 271-281.
Cooke, S. J., & Hinch, S. G. 2013. Improving the reliability of fishway attraction and passage efficiency estimates to inform fishway engineering, science, and practice. Ecological Engineering 58: 123-132.
Robinson, K.A., Hinch, S.G., Gale, M.K., Clark, T.D., Wilson, S.M., Donaldson, M.R., Farrell, A.P., Cooke, S.J., Patterson, D.A. 2013. Effects of post-capture ventilation assistance and elevated water temperature on sockeye salmon in a simulated capture-and-release experiment. Conservation Physiology DOI: 10.1093/conphys/cot015
Murchie, K.J., S.J. Cooke, A.J. Danylchuk, S.E. Danylchuk, T.L. Goldberg, C.D. Suski and D.P. Philipp. 2013. Movement patterns of bonefish (Albula vulpes) in tidal creeks and coastal waters of Eleuthera, The Bahamas. Fisheries Research 147: 404-412.
Cooke, S.J., J.D. Midwood, J.D. Thiem, A.P. Klimley, M.C. Lucas, E.B. Thorstad, J. Eiler, C. Holbrook, and B.C. Ebner. 2013. Tracking animals in freshwater with electronic tags: past, present and future. Animal Biotelemetry 1: 5.
LeDain, M.R.K., S.M. Larocque, L.J. Stoot, N. Cairns, G. Blouin-Demers, and S.J. Cooke. 2013. Assisted recovery following prolonged submergence in fishing nets can be beneficial to turtles: an assessment with blood physiology and reflex impairment. Chelonian Conservation and Biology 12: 172-177.
Steffensen, S.M., J.D. Thiem, K.M. Stamplecoskie, T.R. Binder, C. Hatry, N. Langlois-Anderson, and S.J. Cooke. 2013. Biological effectiveness of an inexpensive nature-like fishway for passage of warmwater fish in a small Ontario stream. Ecology of Freshwater Fish 22:374-383
Thiem, J.D., T.R. Binder, P. Dumont, D. Hatin, C. Hatry, C. Katopodis, K.M. Stamplecoskie, and S.J. Cooke. 2013. Multi-species fish passage behaviour in a vertical slot fishway on the Richelieu River, Quebec, Canada. River research and Applications 29:582-592
Walker, R.W., R.S. Brown, K.A. Deters, M.B. Eppard, and S.J. Cooke. 2013. Does UV disinfection compromise sutures? An evaluation of tissue response and suture retention in salmon surgically implanted with transmitters. Fisheries Research 147:32-35
Cooke, S.J., L. Sack, C.E. Franklin, A.P. Farrell, J. Beardall, M. Wikelski and S.L.Chown. 2013. What is conservation physiology? Perspectives on an increasingly integrated and essential science. Conservation Physiology DOI:10.1093/conphys/cot001 (inaugural paper for this journal)
Thiem, J.D., C. Hatry, J.W. Brownscombe, F. Cull, A.D. Shultz, A.J. Danylchuk, and S.J. Cooke. 2013. Evaluation of radio telemetry to study the spatial ecology of checkered puffers (Sphoeroides testudineus) in shallow tropical marine systems. Bulletin of Marine Science 89:559-569
Nagrodski, A., K.J. Murchie, K.M. Stamplecoskie, C.D. Suski, and S.J. Cooke. 2013. Effects of an experimental short-term cortisol challenge on the behaviour of wild creek chub (Semotilus atromaculatus) in mesocosm and stream environments. Journal of Fish Biology 82:1138-1158
Arlinghaus, R., S.J. Cooke, and W. Potts. 2013. Towards resilient recreational fisheries on a global scale through improved understanding of fish and fisher behaviour. Fisheries Management and Ecology 20:91-98
Cooke, S.J., M.R. Donaldson, C.M. O’Connor, G.D. Raby, R. Arlinghaus, A.J. Danylchuk, K.C. Hanson, S.G. Hinch, T.D. Clark, D.A. Patterson, and C.D. Suski. 2013. The physiological consequences of catch-and-release angling: perspectives on experimental design, interpretation, extrapolation, and relevance to stakeholders. Fisheries Management and Ecology 20:268-287
Thiem, J.D., D. Hatin, P. Dumont, G. Van Der Kraak, and S.J. Cooke. 2013. Biology of lake sturgeon (Acipenser fulvescens) spawning below a dam on the Richelieu River, Quebec: behaviour, egg deposition and endocrinology. Canadian Journal of Zoology 91:175-186
Raby, G.D., S.J. Cooke, K.V. Cook, S.H. McConnachie, M.R. Donaldson, S.G. Hinch, C.K. Whitney, S.M. Drenner, D.A. Patterson, T.D. Clark, and A.P. Farrell. 2013. Resilience of pink salmon and chum salmon to simulated capture stress incurred upon arrival at spawning grounds. Transactions of the American Fisheries Society 142:524-539
Collins, A.L., S.G. Hinch, D.W. Welch, S.J. Cooke, and T.D. Clark. 2013. Intracoelomic acoustic tagging of juvenile sockeye salmon: swimming performance, survival, and post-surgical wound healing in freshwater and during a transition to seawater. Transactions of the American Fisheries Society 142:515-523
Donaldson, M.R., G.D. Raby, V.N. Nguyen, S.G. Hinch, D.A. Patterson, A.P. Farrell, M. Rudd, L.A. Thompson, C.M. O’Connor, A.H. Colotelo, S.H. McConnachie, K.V. Cook, D. Robichaud, K.K. English, and S.J. Cooke. 2013. Evaluation of a simple technique for recovering Pacific salmon from capture stress: integrating comparative physiology, biotelemetry, and social science to solve a conservation problem. Canadian Journal of Fisheries and Aquatic Sciences 70:90-100
Brownscombe, J.W., J.D. Thiem, C. Hatry, F. Cull, C.R. Haak, A.J. Danylchuk, and S.J. Cooke. 2013. Recovery bags reduce post-release impairments in locomotory activity and behaviour of bonefish (Albula spp.) following exposure to angling-related stressors. Journal of Experimental Marine Biology and Ecology 440:207-215
O’Connor, C.M., M. Nannini, D.H. Wahl, S.M. Wilson, K.M. Gilmour, and S.J. Cooke. 2013. Sex-specific consequences of experimental cortisol elevation in pre-reproductive largemouth bass. Journal of Experimental Zoology A 319:23-31
Nagrodski, A., C.D. Suski, and S.J. Cooke. 2013. Health, condition, and survival of creek chub (Semotilus atromaculatus) across a gradient of stream habitat quality following an experimental cortisol challenge. Hydrobiologia 702:283-296
Wilson, S.M., S.G., Hinch, E.J. Eliason, A.P. Farrell, and S.J. Cooke. 2013. Calibrating acoustic transmitters for estimating energy use by wild adult Pacific salmon. Comparative Biochemistry and Physiology 164:491-498
Burnett, N.J., K.M. Stamplecoskie, J.D. Thiem, S.J. Cooke. 2013. Comparison of detection efficiency among three sizes of half duplex passive integrated transponders using manual tracking and fixed antenna arrays. North American Journal of Fisheries Management 33:7-13
Gravel, M.-A., and S.J. Cooke. 2013. Does nest predation pressure influence the energetic cost of nest guarding in a teleost fish? Environmental Biology of Fishes 96:93-107
Trushenski, J.T., J.D. Bowker, S.J. Cooke, D. Erdahl, T. Bell, J.R. MacMillan, R.P. Yanong, J.E. Hill, M.C. Fabrizio, J.E. Garvey, and S. Sharon. 2013. Issues regarding the use of sedatives in fisheries and the need for immediate-release options. Transactions of the American Fisheries Society 142:156-170
Colotelo, A.H., G.D. Raby, C.T. Hasler, T.J. Haxton, K.E. Smokorowski, G. Blouin-Demers, and S.J. Cooke. 2013. Northern pike bycatch in an inland commercial hoop net fishery: effects of water temperature and net tending frequency on injury, physiology, and survival. Fisheries Research 137:41-49
Cooke, S.J., S.G. Hinch, M.C. Lucas, and M. Lutcavage. 2012. Chapter 18 – Biotelemetry and biologging. Pages 819-860 in A. V. Zale, D. L. Parrish, and T. M. Sutton, editors. Fisheries Techniques, Third Edition. American Fisheries Society, Bethesda, Md.
Sutter, D.A.H., C.D. Suski, D.P. Philipp, T. Klefoth, D.H. Wahl, P. Kersten, S.J. Cooke, and R. Arlinghaus. 2013. Recreational fishing selectively captures individuals with the highest fitness potential. Proceedings of the National Academy of Sciences USA 109:20960-20965
Taylor, M.K., and S.J. Cooke. 2012. Meta-analyses of the effects of river flow on fish movement and activity. Environmental Reviews 20:211-219
Nguyen, V.M., G.D. Raby, S.G. Hinch, and S.J. Cooke. 2012. Aboriginal fisher perspectives on use of telemetry technology to study adult Pacific salmon. Knowledge and Management of Aquatic Ecosystems 406:08
Martins, E.G., S.G. Hinch, S.J. Cooke and D.A. Patterson. 2012. Climate effects on growth, phenology, and survival of sockeye salmon (Oncorhynchus nerka): a synthesis of the current state of knowledge and future research directions. Reviews in Fish Biology and Fisheries 22:887-914
Cooke, S.J., and N.W.R. Lapointe. 2012. Addressing editor(ial) malpractice in scientific journals. Ideas in Ecology and Evolution 5:84-92
Donaldson, M.R., S.G. Hinch, G.D. Raby, D.A. Patterson, A.P. Farrell, and S.J. Cooke. 2012. Population- specific consequences of fisheries-related stressors on adult sockeye salmon. Physiological and Biochemical Zoology (focused issue on intraspecific variation in physiology and behavior) 85:729-739
Hasler, C.T., B. Mossop, D.A. Patterson, S.G. Hinch, and S.J. Cooke. 2012. Swimming activity of migrating Chinook salmon in a regulated river. Aquatic Biology 17:47-56
Pon, L.B., S.G. Hinch, C.D. Suski, D.A. Patterson, and S.J. Cooke. 2012. The effectiveness of tissue biopsy as a means of assessing the physiological consequences of fishway passage. River Research and Applications 28:1266-1274
UN FAO. Recreational fisheries. FAO Technical Guidelines for Responsible Fisheries. No. 13. Rome, FAO 2012. 176 pp. (Written under contract by R. Arlinghaus, S.J. Cooke and B. Johnson)
Murchie, K.J., A.J. Danylchuk, S.J. Cooke, A.C. O’Toole, A. Shultz, C. Haak, E. Brooks, and C.D. Suski. 2012 Considerations for tagging and tracking fish in tropical coastal habitats: lessons from bonefish, barracuda, and sharks tagged with acoustic transmitters. American Fisheries Society Special Publication – Handbook of Fish Telemetry. Bethesda, MD. pp. 389-412.
Taylor, M.K., K. V. Cook, C. T. Hasler, D. C. Schmidt, and S. J. Cooke. 2012. Behavioural and physiological responses of free-swimming mountain whitefish Prosopium williamsoni relative to short term changes in river flow. Ecology of Freshwater Fish 21:609-616
