Cook, K.V., S.G. Hinch, S.M. Drenner, E.A. Halfyard, G.D. Raby and S.J. Cooke. In Press. Population-specific mortality in coho salmon (Oncorhynchus kisutch) released from a purse seine fishery. ICES Journal of Marine Science. 00:000-000
Publications
In Press
Lennox, R.J., T.B. Havn, E.B. Thorstad, E. Liberg, S.J. Cooke and I. Uglem. In Press. Behaviour and survival of wild Atlantic salmon (Salmo salar) captured and released while surveillance angling for escaped farmed salmon. Aquaculture Environment Interactions. 00:000-000.
Schoonyan, A., R.T. Kraus, M.D. Faust, A. Cook, C.S. Vandergoot, C.C. Krueger and S.J. Cooke. In Press. Estimating Incision Healing Rate for Surgically Implanted Acoustic Transmitters from Recaptured Adult walleye (Sander vitreus). Animal Biotelemetry. 00:000-000
Landsman, S.J., A.D.M. Wilson, S.J. Cooke and M.R. van den Heuvel. In Press. Fishway passage success for migratory rainbow smelt Osmerus mordax is not dictated by behavioural type. River Research and Applications. 00:000-000.
Gutowsky, L.F.G., Harrison, P.M., Martins, E.G., Leake, A., Patterson, D.A., Zhu, D.Z., Power, M., Cooke, S.J. In Press. Daily temperature experience and selection by adfluvial bull trout (Salvelinus confluentus). Environmental Biology of Fishes. 00:000-000.
Hammerschlag, N., L.F.G. Gutowsky, A.J. Gallagher, P. Matich and S.J. Cooke. In Press. Diel habitat use patterns of a marine apex predator (tiger shark, Galeocerdo cuvier) at a high use area exposed to dive tourism. Journal of Experimental Marine Biology and Ecology. 00:000-000
Lennox RJ, Filous A, Danylchuk SC, Cooke SJ, Brownscombe JW, Friedlander AM, Danylchuk AJ. In Press. Factors influencing post-release predation for a catch-and-release tropical flats fishery with a high predator burden. North American Journal of Fisheries Management 00: 00-00
Diggles, B.K., Arlinghaus, R., Browman, H. I., Cooke, S. J., Cowx, I. G., Kasumyan, A. O., Key, B., Rose, J. D., Sawynok, W., Schwab, A., Skiftesvik, A. B., Stevens, E. D., Watson, C. A. and Wynne, C. D. L. In Press. Responses of larval zebrafish to low pH immersion assay generate multiple interpretations, questions and problems. Comment on Lopez-Luna et al. (2017). Journal of Experimental Biology. 00:000-000.
Harrison, P.M., Gutowsky, L.F.G, Martins, E.G., Patterson, D.A., Cooke, S.J., and Power, M. In Press. Partial diel migration: a facultative migration underpinned by long-term inter-individual variation. Journal of Animal Ecology. 00:000-000
Elmer, L. K., Kelly, L., Rivest, S., Steell, C. Twardek, W., Danylchuk, A. J., Arlinghaus, R., Bennett, J. R., Cooke, S. J. 2017. Angling into the future: Ten commandments for recreational fisheries science, management, and stewardship in a good Anthropocene. Environmental Management 00:000-000.
Cooke, S.J., S. Johansson, K. Andersson, B. Livoreil, G. Post, R. Richards, R. Stewart and A.S. Pullin. In Press. Better evidence, better decisions, better environment: Emergent themes from the first environmental evidence conference. Environmental Evidence. 00:000-000.
Twardek, W., K.S. Peiman, A.J. Gallagher, and S.J. Cooke. In Press. Fido, fluffy, and wildlife conservation: The environmental consequences of domesticated animals. Environmental Reviews. 00:000-000
Birnie-Gauvin, K., K.S. Peiman, M.H. Larsen, H. Baktoft, K. Aarestrup, W.G. Willmore, and S.J. Cooke. In Press. Oxidative stress and partial migration in a salmonid fish. Canadian Journal of Zoology. 00:000-000
Birnie-Gauvin, K., K.S. Peiman, D. Raubenheimer and S.J. Cooke. In Press. Nutritional physiology and ecology of wildlife in a changing world. Conservation Physiology. 00:000-000.
Madliger, C.L., S.J. Cooke and O.P. Love. In Press. A call for more physiology at conservation conferences. Biodiversity and Conservation. 00:000-000.
Brownscombe, J.W., S.J. Cooke, D.A. Algera, K.C. Hanson, E.J. Eliason, N.J. Burnett, A.J. Danylchuk, S.G. Hinch, and A.P. Farrell. In Press. Ecology of exercise in wild fish: integrating concepts of individual physiological capacity, behaviour and fitness through diverse case studies. Integrative and Comparative Biology. 00:000-000.
Birnie-Gauvin, K., S. Walton, C.A. Delle Palme, B.A. Manouchehri, S. Venne, R.J. Lennox, J.M. Chapman, J.R. Bennett and S.J. Cooke. In Press. Conservation physiology can inform threat assessment and recovery planning processes for threatened species. Endangered Species Research. 00:000-000.
Peiman, K.S., K. Birnie-Gauvin, J.D. Midwood, M.H. Larsen, A.D.M. Wilson, K. Aarestrup and S.J. Cooke. In Press. If and when: Intrinsic differences and environmental stressors influence migration in brown trout (Salmo trutta). Oecologia. 00:000-000.
Bliss, S.M., R.J. Lennox, J.D. Midwood and S.J. Cooke. In Press. Temporally stable and distinct fish assemblages between stream and earthen stormwater drain reaches in an urban watershed. Urban Ecosystems. 00:000-000
Gallagher, A.J., P. Szekeres, S.J. Cooke, and J.M. Farrell. In Press. Tracking young-of-year northern pike and muskellunge: monitoring behavior and habitat use during fall outmigration from nursery sites. American Fisheries Society Symposium 00:000-000.
Elmer, L.K., C.M. O’Connor, D.P. Philipp, G. Van Der Kraak, K.M. Gilmour, W.G. Willmore, B.L. Barthel and S.J. Cooke. In Press. Oxidative ecology of paternal care in wild smallmouth bass, Micropterus dolomieu. Journal of Experimental Biology. 00:000-000.
Lennox RJ, Alós J, Arlinghaus A, Horodysky A, Klefoth T, Monk CT, Cooke SJ. In Press . What makes fish vulnerable to capture by hooks? A conceptual framework and a review of key determinants. Fish and Fisheries 01-27. DOI: 10.1111/faf.12219.
Hayden, T.A., T.R. Binder, C.M. Holbrook, C.S. Vandergoot, D.G. Fielder, S.J. Cooke, J.M. Dettmers and C.C. Krueger. In Press. Spawning site fidelity and apparent annual survival of walleye (Sander vitreus) differs between a Lake Huron and Lake Erie tributary. Ecology of Freshwater Fish. 00:000-000.
Midwood JD, Peiman KS, Burt AEW, Sarker MY, Nannini MA, Wahl DH, and Cooke SJ. In press. Size-dependent consequences of exogenous cortisol manipulation on overwinter survival and condition of largemouth bass. Journal of Experimental Zoology Part A.
Birnie-Gauvin, K., D. Costantini, S.J. Cooke, and W.G Willmore. In Press. A comparative and evolutionary approach to oxidative stress in fish: a review. Fish and Fisheries. 00:000-000.
Midwood, J.D., L.F.G. Gutowsky, B. Hlevca, Rick Portiss, M.G. Wells, S.E. Doka and S.J. Cooke. In Press. Tracking bowfin with acoustic telemetry: insight into the ecology of a living fossil. Ecology of Freshwater Fish. 00:000-000
Cooke, S.J., V.M. Nguyen, S.T. Kessel, N.E. Hussey, N. Young and A.T. Ford. In Press. Troubling and unanticipated issues at the frontier of animal tracking for conservation and management. Conservation Biology. 00:000-000.
Nguyen V.M., Brooks, J.L., Young, N., Lennox, R., Haddaway, N., Whoriskey, F., Harcourt, R., Cooke, S.J. In Press. To share or not to share in the emerging era of big data: Perspectives from fish telemetry researchers on data sharing. Canadian Journal of Fisheries and Aquatic Sciences. 00:000-000
Cairns, N.A., L.J. Stoot, G. Blouin-Demers and S.J. Cooke. In Press. Using behavioral observations to develop escape devices for freshwater turtles entrapped in fishing nets. Journal of Fish and Wildlife Management. 00:000-000.
Gutowsky, L.F.G., Stoot, L.J., Cairns, N.A., Thiem, J.D., Brownscombe, J.W., Danylchuk, A.J., Blouin-Demers, G., Cooke, S.J. In Press. Biologgers reveal post-release behavioural impairments of freshwater turtles following interactions with fishing nets. Animal Conservation 00:000-000.
Nguyen, V.M., N. Young, and S.J. Cooke. In Press. A roadmap for knowledge exchange and mobilization research in conservation and natural resource management. Conservation Biology. 00:000-000.
Twardek, W.M., C.K. Elvidge, A.D.M. Wilson, D.A. Algera, A. Zolderdo, S.C. Lougheed and S.J. Cooke. In Press. Do protected areas mitigate the effects of fisheries-induced evolution on parental care behaviour of a teleost fish? Aquatic Conservation. 00:000-000.
2017
Rytwinski T, Taylor JJ, Bennett JR, Smokorowski, KE, Cooke SJ. 2017. What are the impacts of flow regime changes on fish productivity in temperate regions? A systematic map protocol. Environmental Evidence. 6:13. DOI 10.1186/s13750-017-0093-z
Paukert, C.P., A.J. Lynch, T.D. Beard, Y. Chen, S.J. Cooke, M.S. Cooperman, I.G. Cowx, L. Ibengwe, D.M. Infante, B.J.E. Myers, N. Phú Hòa, and I.J. Winfield. 2017. Designing a global assessment of climate change on inland fishes and fisheries: knowns and needs. Reviews in Fish Biology and Fisheries. DOI 10.1007/s11160-017-9477-y
Rytwinski T, Algera DA, Taylor JJ, Smokorowski, KE, Bennett JR, Harrison PM, Cooke SJ (2017) What are the consequences of fish entrainment and impingement associated with hydroelectric dams on fish productivity? A systematic review protocol. Journal of Environmental Evidence 6:8
Crossin, G.T., Heupel, M., Holbrook, C.M., Hussey, N., Lowerre-Barbieri, S., Nguyen, V.M., Raby, G.D., Cooke, S.J. 2017. Acoustic telemetry and fisheries management. Ecological Applications. 00:1-19.
Cooke, E.L.L., A.D.M. Wilson, C.K. Elvidge and S.J. Cooke. 2017. Does capture method or the presence of aquatic protected areas influence the selective harvest of behavioural types in largemouth bass? Canadian Journal of Fisheries and Aquatic Sciences. 00:000-000 dx.doi.org/10.1139/cjfas-2016-0192
Patterson, D.A., Robinson, K.A., Raby, G.D., Bass, A.L., Houtman, R., Hinch, S.G., and Cooke, S.J. 2017. Guidance to Derive and Update Fishing-Related Incidental Mortality Rates for Pacific Salmon. DFO Can. Sci. Advis. Sec. Res. Doc. 2017/011. vii + 56 p.
Patterson, D.A., Robinson, K.A., Lennox, R.J., Nettles, T.L., Donaldson, L.A., Eliason, E.J., Raby, G.D., Chapman, J.M., Cook, K.V., Donaldson, M.R., Bass, A.L., Drenner, S.M., Reid, A.J., Cooke, S.J., and Hinch, S.G. 2017. Review and Evaluation of Fishing-Related Incidental Mortality for Pacific Salmon. DFO Can. Sci. Advis. Sec. Res. Doc. 2017/010. ix + 155 p
Ogburn, M.B., A-L. Harrison, F. Whoriskey, S.J. Cooke, J.E. Mills-Flemming and L.G. Torres. 2017. Addressing challenges in the application of animal movement ecology to aquatic conservation and management. Frontiers in Marine Science. 04:70 doi: 10.3389/fmars.2017.00070
Ward, T.D., J.W. Brownscombe, L.F.G. Gutowsky, R. Ballagh, N. Sakich, D. McLean, G. Quesnel, S. Gambhir, C.M. O’Connor and S.J. Cooke. 2017. Electric fish handling gloves provide effective immobilization and do not impede reflex recovery of adult Largemouth Bass. North American Journal of Fisheries Management. 37: 652-659.
Birnie-Gauvin, K., K.S. Peiman, M.H. Larsen, K. Aarestrup, W.G. Willmore and S.J. Cooke. 2017. Short-term and long-term effects of transient exogenous cortisol manipulation on oxidative stress in juvenile brown trout. Journal of Experimental Biology. 220: 1693-1700.
Wilson, A.D.M., Szekeres, P., Violich, M., Gutowsky, L.F.G., Eliason, E. and S.J. Cooke. 2017. Activity syndromes and metabolism in giant deep-sea isopods. Deep-Sea Research Part 1. 121: 237-244.
Lawrence, M.J., E.J. Eliason, J.W. Brownscombe, K.M. Gilmour, J.W. Mandelman and S.J. Cooke. 2017. An experimental evaluation of the role of the stress axis in mediating predator-prey interactions in wild marine fish. Comparative Physiology and Biochemistry A. 207: 21-29.
Lennox RJ, Cooke SJ, Davis CR, Gargan P, Hawkins LA, Havn TB, Johansen MR, Kennedy R, Richard A, Svenning M-A, Uglem I, Webb J, Whoriskey FG, Thorstad EB. 2017. Pan-Holarctic assessment of post-release mortality of angled Atlantic salmon Salmo salar. Biological Conservation 209: 150-158
Struthers, D.P., L.F.G. Gutowsky, E. Enders, K. Smokorowski, D. Watkinson, E. Bibeau and S.J. Cooke. 2017. Evaluating riverine hydrokinetic turbine operations relative to the spatial ecology of wild fishes. Journal of Ecohydraulics. 2:53-67.
Costa, M.J., R.J. Lennox, C. Katopodis and S.J. Cooke. 2017. Is there evidence for flow variability as an organism level stressor in fluvial fish? Journal of Ecohydraulics. 2:68-83.
Griffin, L.P., J.W. Brownscombe, T.O. Gagné, A.D.M. Wilson, S.J. Cooke and A.J. Danylchuk. 2017. Individual-level behavioral responses of immature green turtles to snorkeler disturbance. Oecologia. 00:000-000.
Messmer, V., M.S. Pratchett, A.S. Hoey, A.J. Tobin, D.J. Coker, S.J. Cooke and T.D. Clark. 2017. Global warming will disproportionately affect larger adults in a predatory coral reef fish. Global Change Biology. 23: 2230–2240.
Twardek, W.M., A.D. Shultz, J.E. Claussen, S.J. Cooke, J.A. Stein, J.B. Koppelman, F.J.S. Phelan and D.P. Philipp. 2017. Potential consequences of angling on nest-site fidelity in largemouth bass. Environmental Biology of Fishes. 100: 611-617.
Cooke, S.J., R.J. Lennox, S.D. Bower, A.Z. Horodysky, M.K. Treml, E. Stoddard, L.A. Donaldson and A.J. Danylchuk. 2017. Fishing in the dark – the science and management of recreational fisheries at night. Bulletin of Marine Science. 93:519-538
Bower, S.D., H. Kooner, H. Ludwig, S. Lumb, J. Raina, J. Webb, Z. Zrini, C.M. O’Connor and S.J. Cooke. 2017. Diel patterns of hooking depth for active and passive angling methods for two freshwater teleost fishes. Bulletin of Marine Science. 93:507-517.
Szekeres, P., A.D.M. Wilson, C.R. Haak, A.J. Danylchuk, J.W. Brownscombe, C.K. Elvidge, A.D. Shultz and S.J. Cooke. 2017. Does Coastal Light Pollution Alter the Nocturnal Behavior and Blood Physiology of Juvenile Bonefish (Albula vulpes)? Bulletin of Marine Science. 93: 491-505.
Hammerschlag, N., C. Meyer, M. Grace, S. Kessell, T. Sutton, E.S. Harvey, C. Paris, D.W. Kerstetter and S.J. Cooke. 2017. Shining a light on fish at night: An overview of patterns and processes operating in fish and fisheries at night and in the perpetual darkness of deep and polar seas. Bulletin of Marine Science. 93:253-284.
Jain-Schlaepfer, S.M.R., G. Blouin-Demers, S.J. Cooke and G. Bulté. 2017. Do boating and basking mix? The effect of basking disturbances by motorboats on the body temperature and energy budget of the northern map turtle. Aquatic Conservation. 27: 547-558.
Belanger, C.B., Peiman, K.S., Vera-Chang, M.N., Moon, T.W., and Cooke, S.J. 2017. Pumpkinseed sunfish (Lepomis gibbosus) from littoral and limnetic habitats differ in stress responsiveness independent of environmental complexity and presence of conspecifics. Canadian Journal of Zoology 95: 193-202.
Gallagher, A.J., N. Hammerschlag, A.J. Danylchuk and S.J. Cooke. 2017. Shark recreational fisheries: status, challenges, and research needs. Ambio. 46:385-398.
Prystay, T.S., C.K. Elvidge, W.M Twardek, J.M. Logan, C.H. Reid, S.H. Clarke, J.G. Foster, E.L.L. Cooke and S.J. Cooke. 2017. Comparison of the behavioural consequences and recovery patterns of largemouth bass exposed to MS-222 or electrosedation. Transactions of the American Fisheries Society. 146:556–566.
Brownscombe J.W., A.J. Reid, L. Dolgova, R. Pusiak, B. Laurich, E.D. Turenne, A. Zolderdo, A. Moraga, K. Birnie-Gauvin, J. Brooks, B. Sullivan, M. Ford, S.D. Bower, P. Szekeres, J.R. Bennett, S.J. Cooke. Aquatic Conservation. In Oxford Bibliographies in Ecology. Ed. David Gibson. New York: Oxford University Press
Pinder, A.C., R. Velterop, S.J. Cooke, and J.R. Britton. 2017. Consequences of catch-and-release angling for black bream Spondyliosoma cantharus, during the parental care period: implications for management. ICES Journal of Marine Science. 74:1-7.
Gallagher, A.J., E.R. Staaterman, S.J. Cooke, N. Hammerschlag. In Press. Behavioural responses to fisheries capture among sharks caught using experimental fishery gear. Canadian Journal of Fisheries and Aquatic Sciences. 74:1-7.
Elvidge, C.K., E.L.L. Cooke, R.A. Cunjak and S.J. Cooke. 2017. Social cues may advertise habitat quality to refuge-seeking conspecifics. Canadian Journal of Zoology. 95:1-5.
Wilson, A.D.M., T. Hayden, C.S. Vandergoot, R.T. Kraus, J.M. Dettmers, S.J. Cooke and C.C. Krueger. 2017. Do intracoelomic telemetry transmitters alter the post-release behaviour of migratory fish? Ecology of Freshwater Fish. 26: 292–300.
Teffer, A.K., S.G. Hinch, K.M. Miller, D.A. Patterson, A.P. Farrell, S.J. Cooke, A.L. Bass, P. Szekeres and F. Juanes. 2017. Capture severity, infectious disease processes and sex influence post-release mortality of sockeye salmon bycatch. Conservation Physiology. 10.1093/conphys/cox017
Cooke, S.J., S. Wesch, L.A. Donaldson, A.D.M. Wilson and N. Haddaway. 2017. A call for evidence-based conservation and management of fisheries and aquatic resources. Fisheries. 42(3): 143-149.
Cooke, S.J., A.J. Gallagher, N.M. Sopinka, V.M. Nguyen, R.A. Skubel, N. Hammerschlag, S. Boon, N. Young and A.J. Danylchuk. 2017. Considerations for effective science communication. FACETS Journal. 2: 233–248.
Harrison P.M, Gutowsky L.F.G., Martins E.G., Ward T.D., Patterson D.A., Cooke S.J., and Power M. 2007. Individual isotopic specialisations predict subsequent inter-individual variation in movement in a freshwater fish. Ecology. 98(3):608-615.
Taylor JJ, Rytwinski T, Bennett JR, Smokorowski KE, Cooke SJ. 2017. The effectiveness of spawning habitat creation or enhancement for substrate spawning temperate fish: a systematic review protocol. Environmental Evidence 06:05
Madliger, C.L., C.E. Franklin, K.R. Hultine, M. van Kleunen, R.J. Lennox, O.P. Love, J.L. Rummer and S.J. Cooke. 2017. Conservation physiology and the quest for a “good” Anthropocene. Conservation Physiology. 07:1-10.
Lynch, A. J., S.J. Cooke, T. D. Beard, Jr., Y.-C. Kao, K. Lorenzen, A. M. Song, M. S. Allen, Z. Basher, D. B. Bunnell, E. V. Camp, I. G. Cowx, J. A. Freedman, V. M. Nguyen, J. K. Nohner, M. W. Rogers, Z. A. Siders, W. W. Taylor, and S-J. Youn. 2017. Grand challenges in the management and conservation of North American inland fish and fisheries. Fisheries. 42:2, 115-124.
Gagne, T.O., K.L. Ovitz, L.P. Griffin, J.W. Brownscombe, S.J. Cooke, and A.J. Danylchuk. 2017. Evaluating the consequences of catch-and-release recreational angling on golden dorado (Salminus brasiliensis) in Salta, Argentina. Fisheries Research.
Brownscombe, J.W., A.J. Danylchuk and S.J. Cooke. 2017. Spatiotemporal drivers of energy expenditure in a coastal marine fish. Oecologia. 183: 689–699
Gallagher, A.J., S. Creel, R.J. Wilson and S.J. Cooke. 2017. Energy landscapes and the landscape of fear. Trends in Ecology and Evolution 32(2).
Ford, A.T., S.J. Cooke, J.R. Goheen, and T.P. Young. 2017. Conserving megafauna or sacrificing biodiversity? A response to Ripple et al. BioScience. 00:000-000
Burnett, N.J., S.G. Hinch, N.N. Bett, D.C. Braun, M.T. Casselman, S.J. Cooke, A. Gelchu, S. Lingard, C.T. Middleton, V. Minke-Martin, and C.F.H. White. 2017. Reducing carryover effects on migration and spawning success of salmon through a management experiment of dam flows. River Research and Applications. 33:3-15.
Brownscombe, J.W., T.P. Parma, J. Almeida, E. Giesbrecht. J. Batson, X. Chen, S. Wesch, T.D. Ward, C. O’Connor, and S.J. Cooke. 2017. The efficacy of assisted ventilation techniques for facilitating the recovery of fish that are exhausted from simulated angling stress. Fisheries Research.
Bower, S.D., A.J. Danylchuk, R. Raghavan, S. Clark Danylchuk, A.C. Pinder, A.M. Alter, and S.J. Cooke. 2017. Involving recreational fisheries stakeholders in development of research and conservation priorities for mahseer (Tor spp.) of India through collaborative workshops. Fisheries Research. 186:665-681.
Cooke, S.J., L.Y. Palensky, and A.J. Danylchuk. 2017. Inserting the angler into catch-and-release angling science and practice. Fisheries Research. 186:599-600.
Bower, S.D., Raghavan, R., Mahesh, N., Danylchuk A.J., Cooke, S.J. Inter-sectoral fisheries governance issues and solutions on the Cauvery River, India. In: A.M. Song, S.D. Bower, P. Onyango, S.J. Cooke, R. Chuenpagdee (Eds.), Inter-Sectoral Governance of Inland Fisheries. TBTI Publication Series, St John’s, NL, Canada.
Danylchuk, A.J., J. Tiedemann, and S.J. Cooke. 2017. Perceptions of recreational fisheries conservation within the fishing industry: knowledge gaps and learning opportunities identified at east coast trade shows in the United States. Fisheries Research. 186:681-687.
Algera, D.A., L.F.G. Gutowsky, A.J. Zolderdo and S.J. Cooke. 2017. Parental Care in a Stressful World: Experimentally Elevated Cortisol and Brood Size Manipulation Influence Nest Success Probability and Nest-Tending Behavior in a Wild Teleost Fish Physiological and Biochemical Zoology. 90(1):85–95.
Barkley, A.N., S.J. Cooke, A.T. Fisk, K. Hedges and N.E. Hussey. 2017. Capture-induced stress in deep-water Arctic fish. Polar Biology. 40:213–220.
Rous, A.M., J.D. Midwood, L.F.G. Gutowsky, N.W.R Lapointe, R. Portiss, T. Sciscione, M.G. Wells, S.E. Doka, and S.J. Cooke. 2017. Telemetry-determined habitat use informs multi-species habitat management in an urban harbour. Environmental Management 59: 118-128.
Cooke, S.J., K.R. Hultine, J.L. Rummer and C.E. Franklin. 2017. Reflections and progress in conservation physiology. Conservation Physiology. 05:1-3.
Magel, J.M.T., N. Pleizier, A.D.M. Wilson, A.D. Shultz, M.N. Vera-Chang, T.W. Moon and S.J. Cooke. 2017. Do physical habitat complexity and predator cues influence the baseline and stress-induced glucocorticoid levels of a mangrove-associated fish? Comparative Biochemistry and Physiology A. 203:281-287.
Xia, J., Y. Ma, C. Fu, S. FuIn and S.J. Cooke. 2017. Effects of temperature acclimation on the critical thermal limits and swimming performance of Brachymystax lenok tsinlingensis: a threatened fish in Qinling Mountain region of China. Ecological Research. 32:61-70.
Bouyoucos, I.A., D.W. Montgomery, J.W. Brownscombe, S.J. Cooke, C.D. Suski, J.W. Mandelman and E.J. Brooks. 2017. Swimming speeds and metabolic rates of semi-captive juvenile lemon sharks (Negaprion brevirostris, Poey) estimated with acceleration biologgers. Journal of Experimental Marine Biology and Ecology. 486:245-254.
Kerr SM, Ward TD, Lennox RJ, Brownscombe JW, Chapman JM, Gutowsky LFG, Logan JM, Twardek WM, Elvidge CK, Danylchuk AJ, Cooke SJ. 2017. Influence of hook type and live bait on the hooking performance of inline spinners in the context of catch-and-release brook trout Salvelinus fontinalis fishing in lakes. Fisheries Research 186:642-647.
Pullen, C.E., K. Hayes, C.M. O’Connor, R. Arlinghaus, C.D. Suski, J.D. Midwood and S.J. Cooke. 2017. Consequences of oral lure retention on the physiology and behaviour of adult northern pike (Esox lucius L.). Fisheries Research.
Brownscombe, J.W, A.J. Danylchuk, J.M. Chapman, L.F.G. Gutowsky, and S.J. Cooke. 2017. Best practices for catch-and-release recreational fisheries – angling tools and tactics. Fisheries Research.
Gutowsky, L.F.G., B.G. Sullivan, A.D.M. Wilson and S.J. Cooke. 2017. Synergistic and interactive effects of angler behaviour, gear type, and fish behaviour on hooking depth in passively angled fish. Fisheries Research.
2016
McLean, M.F., Hanson, K.C., Cooke, S,J., Hinch, S.G., Patterson, D.A., Nettles, T.L., Litvak, M.K., Crossin, G.T. 2016. Physiological stress response, reflex impairment, and delayed mortality of white sturgeon Acipenser transmontanus exposed to simulated fisheries stressors. Conservation Physiology 4: cow031
Sopinka, N.M., M.R. Donaldson, C.M. O’Connor, C.D. Suski and S.J. Cooke. 2016. Stress indicators in fish. Pages 406-436 in Fish Physiology, Vol. 35, Biology of Stress in Fish (eds. C.B. Schreck, L. Tort, A.P. Farrell and C.J. Brauner), Academic Press, Amsterdam.
Harvey-Lavoie, S., S.J. Cooke, G. Guénard and D. Boisclair. 2016. Differences in movements of northern pike inhabiting rivers with contrasting flow regimes. Ecohydrology. 9:1687-1699.
Hayden, T.A., C.M. Holbrook, T.R. Binder, J.M. Dettmers, S.J. Cooke, C.S. Vandergoot and C.C. Krueger. 2016. Probability of acoustic transmitter detections by receiver lines in Lake Huron: results of multi-year field tests and simulations. Journal of Animal Biotelemetry. 04:19.
Eales, J., N.R. Haddaway, C. Bernes, S.J. Cooke, B.G. Jonsson, J. Kouki, and G. Petrokofsky. 2016. What is the effect of prescribed burning in temperate and boreal forest on biodiversity, beyond tree regeneration, pyrophilous and saproxylic species? A systematic review protocol. Environmental Evidence. 05:24.
Foster, J.G., D.A. Algera, J.W. Brownscombe, A.J. Zolderdo and S.J. Cooke. 2016. Consequences of different types of littoral zone light pollution on the parental care behaviour of a freshwater teleost fish. Water, Air, and Soil Pollution. 227: 404. doi:10.1007/s11270-016-3106-6
Young, N., M. Corriveau, V.M. Nguyen, S.J. Cooke and S.G. Hinch. 2016. How do potential knowledge users evaluate new claims about a contested resource? Problems of power and politics in knowledge exchange and mobilization. Journal of Environmental Management. 184: 380-388.
McKenzie, D.J., M. Axelsson, D. Chabot, G. Claireaux, S.J. Cooke, R.A. Corner, G. De Boeck, P. Domenici, P.M. Guerreiro, B. Hamer, C. Jørgensen, S.S. Killen, S. Lefevre, S. Marras, B. Michaelidis, G.E. Nilsson, M.A. Peck, A. Perez-Ruzafa, A.D. Rijnsdorp, H.A. Shiels, J.F. Steffensen, J.C. Svendsen, M.B.S. Svendsen, L.R. Teal, J. van der Meer, T. Wang, J.M. Wilson, R.W. Wilson and J.D. Metcalfe. 2016. Conservation physiology of marine fishes: State of the art and prospects for policy. Conservation Physiology. 4:1-20.
Key, B., R. Arlinghaus, H.I. Browman, S.J. Cooke, I.G. Cowx, B.K. Diggles, J.D. Rose, W. Sawynok, A. Schwab, A.B. Skiftesvik, E.D. Stevens and C.A. Watson. 2016. Problems with equating thermal preference with “emotional fever” and sentience. Comment on Rey et al. (2015) Fish can show emotional fever: stress-induced hyperthermia in zebrafish. Proceedings of the Royal Society of London B. 00:000-000.
Dunmall, K.M., and S.J. Cooke. 2016. Narrow or broad: diverse academic pathways to a career in fisheries science and management. Fisheries. 41:477-478.
Birnie-Gauvin, K., K.S. Peiman, A.J. Gallagher, R. de Bruijn and S.J. Cooke. 2016. Sublethal consequences of urban life for wild vertebrates. Environmental Reviews. 24:416-425.
Cooke, S.J., J.W. Brownscombe, G.D. Raby, F. Broell, S.G. Hinch, T.D. Clark and J.M. Semmens. 2016. Remote bioenergetics measurements in wild fish: opportunities and challenges. Comparative Biochemistry and Physiology A. 202:23-37.
Gallagher, A.J., M.J. Lawrence, S.M.R. Jain-Schlaepfer, A.D.M. Wilson and S.J. Cooke. 2016. Avian predators transmit fear along the air-water interface influencing prey and their parental care. Canadian Journal of Zoology. 94: 863–870.
Delle Palme, C.A., V.M. Nguyen, L.F.G Gutowsky and S.J Cooke. 2016. Do Fishing Education Programs Effectively Transfer Catch-And-Release Best Practices to Youth Yielding Improvements in Fish Condition and Survival? Knowledge and Management of Aquatic Ecosystems. 417:42.
Midwood, J.D., M.H. Larsen, K. Aarestrup and S.J. Cooke. 2016. Stress and food deprivation: linking physiological state to migration success in a teleost fish. Journal of Experimental Biology. 219: 3712-3718
Szekeres, P., E.J. Eliason, D. Lapointe, M.R. Donaldson, J.W. Brownscombe and S.J. Cooke. 2016. On the neglected cold side of climate change and its implications for fish. Climate Research. 69:239-245.
Gutowsky, L.F.G., Brownscombe, J.W., Wilson, A.D.M., Szekeres, P., and Cooke, S.J. 2016. Improved performance, within-individual consistency and between-individual differences in the righting behaviour of the Caribbean sea star, Oreaster reticulatus. Behaviour. 153:1763–1776.
Cooke, S.J., C.J.A. Cooke and J.W. Brownscombe. 2016. Ultralight or heavyweight? The interactive effects of gear strength and air exposure on reflex impairment in largemouth bass. Transactions of the American Fisheries Society. 145:6,1202-1207.
Peat, T.B., L.F.G. Gutowsky, S.E. Doka, J.D. Midwood, N.W.R. Lapointe, B. Hlevca, M.G. Wells, R. Portiss and S.J. Cooke. 2016. Comparative Thermal Biology and Depth Distribution of Northern Pike and Largemouth Bass in an Urban Harbour of the Laurentian Great Lakes. Canadian Journal of Zoology. 94:767-776.
Harrison, P.M., L.F.G. Gutowsky, E.G. Martins, D.A. Patterson, S.J. Cooke and M. Power. 2016. Burbot and large hydropower in North America: Benefits, threats, and research needs for mitigation. Fisheries Management and Ecology. 23:335–349.
Marriner, B.A., A.B.M. Baki, D.Z. Zhu, S.J. Cooke and C. Katopodis. 2016. The hydraulics of a vertical slot fishway: a case study on the multi-species Vianney-Legendre fishway in Quebec, Canada. Ecological Engineering. 90:190-202
McClellan Press, K., J. Mandelman, E. Burgess, S.J. Cooke, V.M. Nguyen, and A.J. Danylchuk. 2016. Catching sharks: recreational saltwater angler behaviors and attitudes regarding shark encounters and conservation. Aquatic Conservation: Marine and Freshwater Ecosystems. 26:689-702.
Cooke, S.J., E.H. Allison, T.D. Beard, R. Arlinghaus, A.H. Arthington, D.M. Bartley, I.G. Cowx, C. Fuentevilla, N. J. Leonard, K. Lorenzen, A.J. Lynch, V.M. Nguyen, S.-J. Youn, W.W. Taylor and R.L. Welcomme. 2016. On the sustainability of inland fisheries: Finding a future for the forgotten. Ambio. 45:753-764.
Binder, T.R., A.D.M. Wilson, S.M. Wilson, C.D. Suski, J-G.J. Godin and S.J. Cooke. 2016. Is there a pace-of-life syndrome linking boldness and metabolic capacity for locomotion in bluegill sunfish? Animal Behaviour. 121:175-183.
Taylor, J.J., N.M. Sopinka, S.M. Wilson, S.G. Hinch, D.A. Patterson, S.J. Cooke and W.G. Willmore. 2016. Examining the relationships between egg cortisol and oxidative stress in developing wild sockeye salmon (Oncorhynchus nerka). Comparative Biochemistry and Physiology A. 200:87-93.
Bellehumeur, K., D. Lapointe, S.J. Cooke and T.W. Moon. 2016. Exposure to sublethal levels of PCB-126 impacts fuel metabolism and swimming performance in rainbow trout. Comparative Biochemistry and Physiology B. 199:97-104.
Bower, S.D., A.J. Danylchuk, R. Raghavan, S. Clark-Danylchuk, A. Pinder, and S.J. Cooke. 2016. Rapid assessment of the physiological impacts caused by catch-and-release angling on blue-finned mahseer (Tor sp.) of the Cauvery River, India. Fisheries Management and Ecology 23:208-217.
Lennox R.J., G. Blouin-Demers, A.M. Rous, and S.J. Cooke. 2016. Tracking invasive animals with electronic tags to assess risks and develop management strategies. Biological Invasions. 18:1219–1233.
Patterson, D.A., S.J. Cooke, S.G. Hinch, K.A. Robinson, N. Young, A.P. Farrell and K.M. Miller. 2016. A perspective on physiological studies supporting the provision of scientific advice for the management of Fraser River sockeye salmon (Oncorhynchus nerka). Conservation Physiology. 4:1
Young, N., Nguyen, V.M., Corriveau, M., Cooke, S.J., Hinch, S.G. 2016. Knowledge users’ perspectives and advice on how to improve knowledge exchange and mobilization in the case of a co-managed fishery, Environmental Science & Policy. 66: 170-178.
Sullivan, B.G., A.D.M. Wilson, L.F.G. Gutowsky, P.H. Patrick, M. Sills and S.J. Cooke. 2016. The behavioral responses of a warm-water teleost to different spectra of light emitting diodes. North American Journal of Fisheries Management. 36(5): 100-1005.
Cooke, S.J. D.M. Bartley, T.D. Beard, I.G. Cowx, C. Goddard, C. Fuentevilla, N. Leonard, A.J. Lynch, K. Lorenzen and W.W. Taylor. 2016. From Ideas to Action: Ten Steps to Responsible Inland Fisheries that Support Livelihoods, Food Security, and Healthy Aquatic Ecosystems. Pages 343-351 in C. Goddard, N. Leonard, W.W. Taylor and D. Bartley, Eds. Freshwater, Fish, and the Future: Proceedings of the Global Cross-Sectoral Conference. American Fisheries Society, Bethesda, MD.
Beard T. D., E. H. Allison, D.M. Bartley, I.G. Cowx, , S. J. Cooke, C. Fuentevilla, A.J. Lynch, and W.W. Taylor. 2016. Inland fish and fisheries: A call to action. Pages 1-6 in C. Goddard, N. Leonard, W.W. Taylor and D. Bartley, Eds. Freshwater, Fish, and the Future: Proceedings of the Global Cross-Sectoral Conference. American Fisheries Society, Bethesda, MD.
Cooke, S.J., A.H. Arthington, S.A. Bonar, S.D. Bower, D.B. Bunnell, R.E.M. Entsua-Mensah, S. Funge-Smith, J.D. Koehn, N.P. Lester, K. Lorenzen, S. Nam, R.G. Randall, P. Venturelli and I.G. Cowx. In Press. Assessment of inland fisheries: A vision for the future. Pages 45-62 in C. Goddard, N. Leonard, W.W. Taylor and D. Bartley, Eds. Freshwater, Fish, and the Future: Proceedings of the Global Cross-Sectoral Conference. American Fisheries Society, Bethesda, MD.
Lorenzen, K., I.G. Cowx, R.E.M. Entsua-Mensah, N.P. Lester, J.D. Koehn, R.G. Randall, S. Nam, S.A. Bonar, D.B. Bunnell, P. Venutrelli, S.D. Bower and S.J. Cooke. 2016. Stock assessment in inland fisheries: a foundation for sustainable use and conservation. Reviews in Fish Biology and Fisheries. 26:405–440.
Gupta, N., S.D. Bower, S.J. Cooke, A.J. Danylchuk and R. Raghavan. 2016. Practices and attitudes of Indian catch-and-release anglers: identifying opportunities for advancing the management of recreational fisheries. Journal of Threatened Taxa. 8(4): 8659–8665.
Donaldson, M.R., N.J. Burnett, D.C. Braun, C.D. Suski, S.G. Hinch, S.J. Cooke, and J.T. Kerr. 2016. Taxonomic bias and international biodiversity conservation research. FACETS. 1: 105–113.
Arlinghaus, R., S.J. Cooke, S.G. Sutton, A.J. Danylchuk, K. De. M. F. Freire, J. Alos, E.T. Da Silva, I.G. Cowx and R. Van Anrooy. 2016. Recommendations for the future of recreational fisheries to prepare the social-ecological system for coping with change. Fisheries Management and Ecology.23; 177–186
Thiem, J.D., J.W. Dawson, D. Hatin, A.J. Danylchuk, P. Dumont, A.C. Gleiss, R.P. Wilson and S.J. Cooke. 2016. Swimming activity and energetic costs of adult lake sturgeon during fishway passage. Journal of Experimental Biology. 219; 2534-2544.
Nguyen, V.M., A.J. Lynch, N. Young, I.G. Cowx, T.D. Beard Jr., W.W. Taylor and S.J. Cooke. 2016. To manage inland fisheries is to manage at the social-ecological watershed scale. Journal of Environmental Management. 181; 312-325.
Hughes, R.M., C. B. M. Alves, F. Amezcua, J. Claussen, S. J. Cooke, I. G. Cowx, K. D. Fausch, M. T. Ferreira, W. G. Franzin, D. Hall, M. O. Ipinmoroti, R. Ligeiro, N. Mercado-Silva, M. Miller, P. S. Pompeu, D. C. Schmidt, L. G. M. Silva and B. F. Terra. 2016. Preparing for international research and teaching. Fisheries. 41:464-465.
Cooke, S.J., J.C. Rice, K.A. Prior, R. Bloom, O. Jensen, D.R. Browne, L.A. Donaldson, J.R. Bennett, J.C. Vermaire and G. Auld. 2016. The Canadian context for evidence-based conservation and environmental management. Environmental Evidence. 5:14
Whitney, J.E., R. Al-Chokhachy, D.B. Bunnell, C.A. Caldwell, S.J. Cooke, E.J. Eliason, M. Rogers, A. Lynch and C. Paukert. 2016. Physiological basis of climate change impacts on North American inland fishes. Fisheries. 41:7, 332-345.
Donaldson, L.A., and S.J. Cooke. 2016. The effectiveness of non-native fish eradication techniques in freshwater ecosystems: a systematic review protocol. Environmental Evidence. 5(12):1-10.
Cooke, S.J., E.G. Martins, D.P. Struthers, L.F.G. Gutowsky, M. Power, S.E. Doka, J.M. Dettmers, D.A. Crook, M.C. Lucas, C.M. Holbrook and C.C. Krueger. 2016. A moving target – incorporating knowledge of the spatial ecology of fish into the assessment and management of freshwater fish populations. Environmental Monitoring and Assessment. 188:Article #239.
Harrison, P.M., L.F.G. Gutowsky, E.G. Martins, D.A. Patterson, S.J. Cooke, and M. Power. 2016. Temporal plasticity in thermal habitat selection of burbot, Lota lota, a diel-migrating winter-specialist. Journal of Fish Biology. 88:2111–2129.
Lennox R.J., S.J. Cooke, O.H. Diserud, T.B. Havn, M. Rognli, M. Johansen, E.B. Thorstad, F.G. Whoriskey and I. Uglem. 2016. Use of simulation approaches to evaluate the consequences of catch-and-release angling on the migration behaviour of adult Atlantic salmon (Salmo salar). Ecological Modeling. 333: 43-50.
Dick, M., A.M. Rous, V.M. Nguyen and S.J. Cooke. 2016. Necessary but challenging: multiple disciplinary approaches to solving conservation problems. FACETS Journal. 1: 67-82 .
Raby, G.D., M.T. Casselman, S.J. Cooke, S.G. Hinch, A.P. Farrell and T.D. Clark. 2016. Aerobic scope increases throughout an ecologically relevant temperature range in coho salmon. Journal of Experimental Biology. 219: 1922-1931.
Lennox, R.J., M. Falkegård, L. A. Vøllestad, S.J. Cooke, and E.B. Thorstad. 2016. Influence of harvest restrictions on angler release behaviour and size selection in a recreational fishery. Journal of Environmental Management. 176: 139–148.
Pankhurst, K., J.D. Midwood, H. Wachelka and S.J. Cooke. 2016. Comparative spatial ecology of sympatric adult muskellunge and northern pike during a one year period in an urban reach of the Rideau River, Canada. Environmental Biology of Fishes. 99:409-421.
Zolderdo, A.J., D.A. Algera, M.J. Lawrence, K.M. Gilmour, M.D. Fast, J. Thuswaldner, W. Willmore and S.J. Cooke. 2016. Stress, nutrition and parental care in a teleost fish: Exploring mechanisms with supplemental feeding and cortisol manipulation. Journal of Experimental Biology. 219: 1237-1248.
Lynch, A. J., S. J. Cooke, A. Deines, S. Bower, D. B, Bunnell, I. G. Cowx, V. M. Nguyen, J. Nonher, K. Phouthavong, B. Riley, M. W. Rogers, W.W. Taylor, W.M. Woelmer, S. Youn and T. D. Beard, Jr. 2016. The social, economic, and ecological importance of inland fishes and fisheries. Environmental Reviews. 24: 115-121.
Lennox, R.J., I. Mayer, T.B. Havn, M.R. Johansen, K. Whoriskey, S.J. Cooke, E.B. Thorstad and I. Uglem. 2016. Consequences of recreational angling and air exposure on the physiological status and reflex impairment of European grayling (Thymallus thymallus). Boreal Environment Research. 21: 461–470.
Clark, T.D., N.B. Furey, E.L. Rechisky, M.K. Gale, K.M. Jeffries, A.D. Porter, M.T. Casselman, A.G. Lotto, D.A. Patterson, S.J. Cooke, A.P. Farrell, D.W. Welch and S.G. Hinch. 2016. Tracking wild sockeye salmon smolts to the ocean reveals distinct regions of nocturnal movement and high mortality. Ecological Applications. 26: 959–978.
Lennox, R.J., O.H. Diserud, S.J. Cooke, E.B. Thorstad, F.G. Whoriskey, Ø. Solem, T.B. Havn and I. Uglem. 2016. Switching between gear types increases recapture rates of Atlantic salmon (Salmo salar) in catch-and-release fisheries. Ecology of Freshwater Fish. 25:422-428.
Gutowsky, L.F.G., Harrison, P.M., Silva, A., Martins, E.G., Power, M., Zhu, D.Z., Cooke, S.J. 2016. Upstream passage and entrainment of fish at hydropower dams: lessons learned from NSERC’s HydroNet 2010-2015. DFO Can. Sci. Advis. Sec. Res. Doc. 2016/039. vii + 35 p
Cooke, S.J. 2016. Unraveling the mystery of marine fish migration. Book review of Secor’s “Ecology of Marine Fish Migration”. Ecology. 97:1086–1087
Ward, T.D., D.A. Algera, A.J. Gallagher, E. Hawkins, A. Horodysky, C. Jørgensen, S.S. Killen, D.J. McKenzie, J.D. Metcalfe, M.A. Peck, M. Vu, and S.J. Cooke. 2016. Understanding the Individual to Implement the Ecosystem Approach to Fisheries Management. Conservation Physiology. 4(1):cow005. doi:10.1093/conphys/cow005
Cooke, S.J., V.M. Nguyen, J.M. Dettmers, R. Arlinghaus, M.C. Quist, D. Tweddle, O.L.F. Weyl, R. Raghavan, M. Portocarrero-Aya, E. Agudelo Cordoba, and I.G. Cows. 2016. Sustainable inland fisheries – Perspectives from the recreational, commercial and subsistence sectors from around the globe. Pages 467-505 in G.P. Closs, M. Krkosek and J.D. Olden, Eds. Conservation of Freshwater Fishes. Cambridge University Press, Cambridge.
Stevens, E.D., R. Arlinghaus, H. Browman, S.J. Cooke, I.G. Cowx, B.K. Diggles, B. Key, J.D. Rose, W. Sawynok, A. Schwab, A.B. Skiftesvik, C.A. Watson and C.D.L. Wynne. 2016. Stress is not pain. Comment on Elwood and Adams (2015) Electric shock causes physiological stress responses in shore crabs, consistent with prediction of pain. Biology Letters. 12:20151006. doi:10.1098/rsbl.2015.1006.
Crawford, C., J.D. Midwood, R.J. Lennox, S. Bliss, C. Belanger and S.J. Cooke. In Press. Experimental displacement of longnose dace, Rhinichthys cataractae (Actinopterygii, Cyprinidae), reveals rapid fish avoidance of a stormwater drain in an urban watershed. Hydrobiologia. 767:197-206.
Cooke, S.J. 2016. Spinning our wheels and deepening the divide: Call for an evidence-based approach to the fish pain debate. Animal Sentience. 2016.072.
Killen, S.S., B. Adriaenssens, S. Marras, G. Claireaux and S.J. Cooke. 2016. Context-dependency of trait repeatability and its relevance for management and conservation of fish populations. Conservation Physiology. 4:10.1093/conphys/cow007.
Hatry, C., J.D. Thiem, D. Hatin, P. Dumont, K.E. Smokorowski and S.J. Cooke. 2016. Fishway approach behaviour and passage of three redhorse species (Moxostoma anisurum, M. carinatum, and M. macrolepidotum) in the Richelieu River, Quebec. Environmental Biology of Fishes. 99:249-263.
Cooke, S.J., V.M. Nguyen, A.D.M. Wilson, M.R. Donaldson, A. Gallagher, N. Hammerschlag and N.R. Haddaway. 2016. The need for speed in a crisis discipline: perspectives on peer review duration and implications for conservation science. Endangered Species Research. 30:11-18. doi: 10.3354/esr00721
Lennox R.J., J.M. Chapman, C.M. Souliere, C. Tudorache, M. Wikelski, J.D. Metcalfe, and S.J. Cooke. 2016. Conservation physiology of animal migration. Conservation Physiology. 4: 10.1093/consphys/cov072.
Cooke, S.J., A.D.M. Wilson, C.K. Elvidge, R.J. Lennox, N. Jepsen, A.H. Colotelo and R.S. Brown. 2016. Ten practical realities for Institutional Animal Care and Use Committees when evaluating protocols dealing with fish in the field. Reviews in Fish Biology and Fisheries. 26: 123-133.
Cooke, S.J., Z.S. Hogan, P.A. Butcher, M.J.W. Stokesbury, R. Raghavan, A.J. Gallagher, N. Hammerschlag and A.J. Danylchuk. In Press. Angling for endangered fish: Conservation problem or conservation action? Fish and Fisheries. 17: 249-265.
Horodysky, A.Z., S.J. Cooke, J.E. Graves and R.W. Brill. 2016. Fisheries conservation on the high seas: Linking conservation physiology and fisheries ecology for the management of large pelagic fishes. Conservation Physiology. 4:10.1093/conphys/cov059.
Crossin, G.T., O.P. Love, S.J. Cooke and T.D. Williams. 2016. Glucocorticoid manipulations in free-living animals: considerations of dose delivery, life-history context, and reproductive state. Functional Ecology. 30:116-125. doi: 10.1111/1365-2435.12482.
King, G.D., J.M. Chapman, S.J. Cooke and C.D. Suski. 2016. Stress in the neighborhood: Tissue glucocorticoids relative to stream quality for five species of fish. Science of the Total Environment. 547:87-94.
King, G.D., J.M. Chapman, J.D. Midwood, S.J. Cooke and C.D. Suski. 2016. Watershed-scale land use activities influence the physiological condition of stream fish. Physiological and Biochemical Zoology. 89:10-25.
Filguiera, R., J.M. Chapman, C.D. Suski, and S.J. Cooke. 2016. The influence of watershed land use cover on stream fish diversity and size-at-age of a generalist fish. Ecological Indicators. 60: 248-257.
Veilleux, M.A.N., N.W.R. Lapointe, D.M. Webber, T.R. Binder, P.J. Blanchfield, L. Cruz-Font, M.G. Wells, M.H. Larsen, S.E. Doka and S.J. Cooke. 2016. Pressure sensor calibrations of acoustic telemetry transmitters. Journal of Animal Biotelemetry. 4:3. DOI 10.1186/s40317-015-0093-0.
Bower, S.D., A.J. Danylchuk, J.W. Brownscombe, J.D Thiem, and S.J. Cooke. 2016. Evaluating consequences of catch-and-release angling on the physiological status of peacock bass (Cichla ocellaris) in Puerto Rico: A rapid assessment approach. Fisheries Research. 175:95-102. dx.doi.org/10.1016/j.fishres.2015.11.014
Belanger, C.B., M.N. Vera-Chang, T.W. Moon, J.D. Midwood, C.D. Suski and S.J. Cooke. 2016. Seasonal variation in baseline and maximum whole-body glucocorticoid concentrations in a small-bodied stream fish independent of habitat quality. Comparative Biochemistry and Physiology A. 192:1-6. dx.doi.org/10.1016/j.cbpa.2015.10.027.
Madliger, C.L., S.J. Cooke, E.J. Crespi, J.L. Funk, K.R. Hultine, K.E. Hunt, J.R. Rohr, B.J. Sinclair, C.D. Suski, C.K.R. Willis and O.P. Love. 2016. Success stories and emerging themes in conservation physiology. Conservation Physiology. 4:DOI: 10.1093/conphys/cov057.
2015
Hlevca, B., S.J. Cooke, J.D. Midwood, S.E. Doka, R. Portiss and M. Wells. 2015. Characterization of water temperature variability within a harbour connected to a large lake. Journal of Great Lakes Research. 41:1010-1023.
Wilson, A.D.M., J.W. Brownscombe, J. Krause, S. Krause, L. Gutowsky, E. Brooks, and S.J.Cooke. 2015. Integrating advances in network analysis, sensor tags and observation to understand shark ecology and behaviour. Behavioral Ecology. 26:1577-1586. doi:10.1093/beheco/arv115.
Dufour, K., L.F.G. Gutowsky, D. Algera, A. Zolderdo, J.M.T. Magel, N. Pleizier, M. Dick and S.J. Cooke. 2015. An experimental test of in-season homing mechanisms used by nest-guarding male Largemouth Bass following displacement. Behavioural Processes. 120:87-93.
Lawrence, M.J., H.L.J. Stemberger, A.J. Zolderdo, D.P. Struthers and S.J. Cooke. 2015 The effects of modern war and military activities on biodiversity and the environment. Environmental Reviews. 23:443-460. dx.doi.org/10.1139/er-2015-0039.
Gutowsky, L.F.G., P.M. Harrison, E.G. Martins, A. Leake, D.A. Patterson, M. Power and S.J. Cooke. 2015. Interactive effects of sex and body size on adfluvial bull trout (Salvelinus confluentus) movement ecology. Canadian Journal of Zoology. 94:31-40. dx.doi.org/10.1139/cjz-2015-0104.
Gallagher, A.J., S.J. Cooke, and N. Hammerschlag. 2015467. Risk perceptions and conservation ethic among recreational anglers targeting threatened sharks in the subtropical Atlantic. Endangered Species Research. 29: 81-93 doi: 10.3354/esr00704.
Murchie, K.J., S. Clark Danylchuk, A.J. Danylchuk, and S.J. Cooke. 2015. Fish community and habitat assessments of three adjacent tidal creeks on Cape Eleuthera, The Bahamas. Pages 67-80 in K.J. Murchie and P.P. Daneshgar (Eds.), Proceedings of the Second International Symposium on Mangroves as Fish Habitat. Mazatlán, Mexico. American Fisheries Society, Bethesda, Maryland.
Midwood, J.D., J.M. Chapman, M. Cvetkovic, G.D. King, T.D. Ward, S.J. Cooke, and C.D. Suski. 2015. Diel variability in fish assemblage in coastal wetlands and tributaries of the St. Lawrence River: A cautionary tale for fisheries monitoring. Aquatic Sciences. DOI:10.1007/s00027-015-0422-7.
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Landsman, S.J., E.G. Martins, L.F.G. Gutowsky, C.D. Suski, R. Arlinghaus and S.J. Cooke. 2015. Locomotor activity patterns of muskellunge (Esox masquinongy) assessed using tri-axial acceleration sensing acoustic transmitters. Environmental Biology of Fishes. 98:2109-2121.
Nowell, L.B., J.W. Brownscombe, L.F.G. Gutowsky, K.J. Murchie, C.D. Suski, A.J. Danylchuk, A. Shultz and S.J. Cooke. 2015. Swimming energetics and thermal ecology of adult bonefish (Albula vulpes): A combined laboratory and field study in Eleuthera, The Bahamas. Environmental Biology of Fishes 98:2133-2146.
Brownscombe, J.W., L. Griffin, T. Gagne, C.R. Haak, S.J. Cooke and A.J. Danylchuk. 2015. Physiological stress and reflex impairment of recreationally angled bonefish in Puerto Rico. Environmental Biology of Fishes. 98:2287-2295.
Adams, A.J., and S.J. Cooke. 2015. Advancing the science and management of flats fisheries for bonefish, tarpon, and permit. Environmental Biology of Fishes. 98:2123-2131.
Murchie, K.J., A.D. Shultz, J.A. Stein, S.J. Cooke, J. Lewis, J. Franklin, G. Vincent, E.J. Brooks, J.E. Claussen and D.P. Philipp. 2015. Defining adult bonefish (Albula vulpes) movement corridors around Grand Bahama in the Bahamian Archipelago. Environmental Biology of Fishes. 98:2203-2212.
Cooke, S.J., R. Arlinghaus, B.M. Johnson, and I.G. Cowx. 2015. Recreational fisheries in inland waters. Pages 449-465 in J. Craig, editor. Freshwater Fisheries Ecology. Blackwell Science, UK.
Arlinghaus, R., K. Lorenzen, B.M. Johnson, S.J. Cooke, and I.G. Cowx. 2015. Managing freshwater fisheries: addressing habitat, people and fish. Pages 557-579 in J. Craig, editor. Freshwater Fisheries Ecology. Blackwell Science, UK.
Peat, T. B., T. A. Hayden, L. F. G. Gutowsky, C. S. Vandergoot, D. G. Fielder, C. P. Madenjian, K. J. Murchie, J. M. Dettmers, C. C. Krueger, and S. J. Cooke. 2015. Seasonal thermal ecology of adult walleye (Sander vitreus) in Lake Huron and Lake Erie. Journal of Thermal Biology. 53:98-106.
Midwood, J.D., M.H. Larsen, M. Boel, K. Aarestrup and S.J. Cooke. 2015. An experimental field evaluation of winter carryover effects in semi-anadromous brown trout (Salmo trutta). Journal of Experimental Zoology A. 323A:645–654.
Nguyen, V.M., N.R. Haddaway, L.F.G. Gutowsky, A.D.M. Wilson, A.J. Gallagher, M.R. Donaldson, N. Hammerschlag and S.J. Cooke. 2015. How long is too long in contemporary peer review? Perspectives from authors publishing in conservation biology journals. PLoS ONE. 10(8): e0132557.
Drenner, S.M., S.G. Hinch. E.G. Martins, N. Furey, T.D. Clarke, S.J.Cooke, D. Patterson, D. Robichaud, D.W. Welch. A.P. Farrell and R. Thomson. 2015. Environmental conditions and physiological state influence estuarine movements of homing sockeye salmon. Fisheries Oceanography. 24: 307–324.
Struthers, D.P., A.J. Danylchuk, A.D.M. Wilson and S.J. Cooke. 2015. Action cameras: Bringing aquatic and fisheries research into view. Fisheries. DOI: 10.1080/03632415.2015.1082472.
Raby, G.D., S.G. Hinch, D.A. Patterson, J.A. Hills, L.A. Thompson, and S.J. Cooke. 2015. Mechanisms to explain purse seine bycatch mortality of coho salmon. Ecological Applications. 25: 1757-1775.
Raby, G.D., M.R. Donaldson, S.G. Hinch, T.D. Clark, E.J. Eliason, K.M. Jeffries, K.V. Cook, A. Teffer, A.L. Bass, K.M. Miller, D.A. Patterson, A.P. Farrell and S.J. Cooke. 2015. Fishing for effective conservation: context and biotic variation are keys to understanding the survival of Pacific salmon after catch-and-release. Integrative and Comparative Biology. 55: 554-576.
Pleizier, N., A.D.M. Wilson, A.D. Shultz and S.J. Cooke. 2015. Puffed and bothered: personality, performance, and the effects of stress on checkered pufferfish. Physiology and Behavior. 152: 68-78.
O’Connor, C.M., and S.J. Cooke. 2015. Ecological carryover effects complicate conservation. Ambio. 44:582-591.
Handley, G., C.M. Frantz, P.M. Kocovsky, D.R. DeVries, S.J. Cooke and J. Claussen. 2015. An examination of gender differences in the American Fisheries Society peer review process. Fisheries. 40:442-451.
Cook, K.V., R.J. Lennox, S.G. Hinch, and S.J. Cooke. 2015. Fish out of water: How much air is too much? Fisheries. 40:452-461.
Cooke, S.J., J.M. Chapman and J.C. Vermaire. 2015. On the apparent failure of silt fences to protect freshwater ecosystems from sedimentation: a call for improvements in science, technology, training and compliance monitoring. Journal of Environmental Management. 164:67-73.
Philipp, D.P., J.E. Claussen, J.B. Koppelman, J.A. Stein, S.J. Cooke, C.D. Suski, D.H. Wahl, D.A.H. Sutter, and R. Arlinghaus. 2015. Fisheries-induced evolution in largemouth bass – linking vulnerability to angling, parental care, and fitness. American Fisheries Society Symposium. 82:223–234.
Horodysky, A.Z., S.J. Cooke and R.W. Brill. 2015. Physiology in the Service of Fisheries Science – Why Thinking Mechanistically Matters. Reviews in Fish Biology and Fisheries. 25:425-447.
Sopinka, N.M., L.D. Patterson, J.C. Redfern, N. Pleizier, C. Belanger, J.D. Midwood, G.T. Crossin and S.J. Cooke. 2015. Manipulating glucocorticoids in wild animals: basic and applied perspectives. Conservation Physiology. 3(1): cov031 doi:10.1093/conphys/cov031
Gupta, N., S.D. Bower, R. Raghavan, A.J. Danylchuk, and S.J. Cooke. 2015. Status of recreational fisheries in India: development, issues and opportunities. Reviews in Fisheries Science and Aquaculture. 23:291-301.
Lennox, R.J., J.W. Brownscombe, S.J. Cooke, A.J. Danylchuk, P.S. Moro, E.A. Sanches, and D. Garonne-Neto. 2015. Evaluation of catch-and-release angling practices for the fat snook Centropomus parallelus in a Brazilian estuary. Ocean and Coastal Management. 113:1-7.
Havn, T.B., I. Uglem, Ø. Solem, S.J. Cooke, F.G. Whoriskey and E.B. Thorstad. 2015. The effect of catch-and-release angling at high water temperatures on behavior and survival of Atlantic salmon during spawning migration. Journal of Fish Biology. 87:342–359.
Midwood, J.D., S.J. Kerr, P. Levick and S.J. Cooke. 2015. Muskellunge science and management: progress through partnerships. Environmental Biology of Fishes. 98:2031-2035.
Lennox R.J., K. Choi, P.M. Harrison, J.E. Paterson, T. Peat, T. Ward, and S.J. Cooke. 2015. Improving science-based invasive species management with physiological knowledge, concepts, and tools. Biological Invasions. 17:2213-2227.
Gallagher, A.J., N. Hammerschlag, S.J. Cooke, D.P. Costa and D.J. Irschick. 2015. One size doesn’t always fit all: A reply to Stroud and Feeley. Trends in Ecology and Evolution. 30:297–298.
Wilson, A.D.M., M. Wikelski, R.P. Wilson and S.J. Cooke. 2015. Utility of biological sensor tags in animal conservation. Conservation Biology. 29:1065–1075.
Maitland, B.M., S.J. Cooke and M. Poesch. 2015. Finding the path to a successful graduate and research career: Advice for early career researchers. Fisheries. 40:399-403.
Wilson, A.D.M., J.W. Brownscombe, B. Sullivan, S.M.R. Jain-Schlaepfer and S.J. Cooke. 2015. Does angling technique and lure type selectively target fishes based on their behavioural type? PLoS ONE. 10: e0135848.
Chapman, J.M., D. Algera, M. Dick, E.E. Hawkins, M.J. Lawrence, R.J. Lennox, A.M. Rous, C.M. Souliere, H.L.J. Stemberger, D.P. Struthers, M. Vu, T.D. Ward, A.J. Zolderdo and S.J. Cooke. 2015. Being relevant: Practical guidance for early career researchers interested in solving conservation problems. Global Ecology and Conservation. 4: 334-348.
Thiem, J.D., J.W. Dawson, A.C. Gleiss, E.G. Martins, A. Haro, T. Castro-Santos, A.J. Danylchuk, R.P. Wilson and S.J. Cooke. 2015. Accelerometer-derived activity correlates with volitional swimming speed in lake sturgeon (Acipenser fulvescens). Canadian Journal of Zoology. 93:645-654.
Rous, A.M., A. Forrest, E. Hart McKittrick, G. Letterio, J. Roszell, T. Wright, and S.J. Cooke. 2015. Orientation and position of fish affects recovery time from electrosedation. Transactions of the American Fisheries Society 144: 820-828.
Moraga, A.D., A.D.M. Wilson and S.J. Cooke. 2015. Does lure colour influence catch per unit effort, fish capture size and hooking injury in angled largemouth bass? Fisheries Research 172: 1-6.
Philipp, D.P., J.E. Claussen, J.B. Koppelman, J.A. Stein, S.J. Cooke, C.D. Suski, D.H. Wahl, D.A. Sutter, R. Arlinghaus. 2015. Fisheries-Induced Evolution in Largemouth Bass: Linking Vulnerability to Angling, Parental Care, and Fitness. American Fisheries Society Symposium 82: 223-234.
Hussey, N.E., S.T. Kessel, K. Aarestrup, S.J. Cooke, P.D. Cowley, A.T. Fisk, R.G. Harcourt, K.N. Holland, S.J. Iverson, J.F. Kocik, J.E. Mills Flemming and F.G. Whoriskey. In Press. Aquatic animal telemetry: a panoramic window into the underwater world. Science DOI: 10.1126/science.1255642
Robinson, K.A., S.G. Hinch, G.D. Raby, M.R. Donaldson, D. Robichaud, D.A. Patterson, and S.J. Cooke. 2015. Influence of post-capture ventilation assistance on migration success of adult sockeye salmon following capture and release. Transactions of the American Fisheries Society 144: 693-704.
Raby, G.D., T.D. Clark, A.P. Farrell, D.A. Patterson, N.N. Bett, S.M. Wilson, W.G. Willmore, Cory D. Suski, S.G. Hinch and S.J. Cooke. 2015. Facing the river gauntlet: understanding the effects of fisheries capture and water temperature on the physiology of coho salmon. PLoS One 10:e0124023.
Chapman, J.M., D.J. Marcogliese, C.D. Suski, and S.J. Cooke. 2015. Variation in parasite communities and health indices of juvenile Lepomis gibbosus across a gradient of watershed land-use and habitat quality. Ecological Indicators doi:10.1016/j.ecolind.2015.05.013
Brownscombe, J.W., A.D.M. Wilson, E. Samson, L. Nowell, S.J. Cooke and A.J. Danylchuk. 2015. Individual differences in activity and habitat selection of juvenile queen conch evaluated using acceleration biologgers. Endangered Species Research 27: 181-188.
Raby, G.D., S.M. Wilson, D.A. Patterson, S.G. Hinch, T.D. Clark, A.P. Farrell, and S.J. Cooke. 2015. A physiological comparison of three techniques for reviving sockeye salmon exposed to a severe capture stressor during upriver migration. Conservation Physiology doi:10.1093/conphys/cov015
Silva, A.T., C. Hatry, J.D. Thiem, L.F.G. Gutowsky, D. Hatin, D.Z. Zhu, J.W. Dawson, C. Katopodis and S.J. Cooke. 2015. Behaviour and locomotor activity of a migratory catostomid during fishway passage. PLoS One doi: 10.1371/journal.pone.0123051
Binder, T.R., C.M. O’Connor, S.H. McConnachie, S.M. Wilson, M.A. Nannini, D.H. Wahl and S.J. Cooke. 2015. Is winter worse for stressed fish? The consequences of exogenous cortisol manipulation on over-winter survival and condition of juvenile largemouth bass. Comparative Biochemistry and Physiology A 187: 97-102.
Jeffrey, J.D., C.T. Hasler, J.M. Chapman, S.J. Cooke, and C.D. Suski. 2015. Linking landscape-scale disturbances to stress and condition of fish: Implications for restoration and conservation. Integrative and Comparative Biology DOI: 10.1093/icb/icv022
Lennox, R. J., Uglem, I., Cooke, S. J., Næsje, T., Whoriskey, F. G., Havn, T. B., Ulvan, E. M., Solem, Ø., Thorstad, E. B. 2015. Does catch-and-release angling alter the behavior and fate of adult Altantic Salmon during upriver migration? Transactions of the American Fisheries Society. 144:2, 400-409.
Cooke, S.J., and J.C. Vermaire. 2015. Environmental studies and environmental science today: inevitable mission creep and integration in action-oriented transdisciplinary areas of inquiry, training and practice. Journal of Environmental Studies and Sciences. 5:70-78.
Harrison,P.M., L.F.G. Gutowsky, E.G. Martins, D.A. Patterson, S.J. Cooke and M. Power. 2015. Personality-dependent spatial ecology occurs independently from dispersal in wild burbot (Lota lota). Behavioral Ecology 26:483-492.
Cull, F., C.M. O’Connor, C.D. Suski, A.D. Shultz, A.J. Danylchuk and S.J. Cooke. 2015. Puff and bite: The relationship between the glucocorticoid stress response and anti-predator performance in checkered puffer (Sphoeroides testudineus). General and Comparative Endocrinology 214:1-8.
Midwood, J.D., N.A. Cairns, L.J. Stoot, S.J. Cooke, and G. Blouin-Demers. 2015. Bycatch mortality can cause extirpation of four freshwater turtle species. Aquatic Conservation: Marine and Freshwater Ecosystems. 25: 71-80.
Pleizier, N., L.F.G. Gutowsky, V.M. Peddemors, S.J. Cooke and P.A. Butcher. 2015. Variation in whole-, landed- and trimmed-carcass and fin-weight ratios for various sharks captured on demersal set-lines off eastern Australia. Fisheries Research. 167:190-198.
Taylor, J.J., S.M. Wilson, N.M. Sopinka, S.G. Hinch, D.A. Patterson, S.J. Cooke and W.G. Willmore. 2015. Are there intergenerational and population-specific effects of oxidative stress in sockeye salmon (Oncorhynchus nerka)? Comparative Biochemistry and Physiology A. 184:97-104.
Gutowsky, L.F.G., W. Aslam, R. Banisaeed, L.R. Bell, K.L. Bove, J.W. Brownscombe, G.J.J. Burrows, E. Chu, J.M.T. Magel, A.M. Rous, and S.J. Cooke. 2015. Considerations for the design and interpretation of fishing release mortality estimates. Fisheries Research 167:64-70.
Cooke, S.J., and K.J. Murchie. 2015. Status of aboriginal, commercial and recreational inland fisheries in North America: past, present and future. Fisheries Management and Ecology 22: 1-111.
Gallagher, A.J., N. Hammerschlag, S.J. Cooke, D.P. Costa, and D.J. Irschick. 2015. Evolutionary theory as a tool for predicting extinction risk. Trends in Ecology and Evolution 30:61-65.
Lennox, R. J., K. Whoriskey, G. T. Crossin, and S. J. Cooke. 2015. Influence of angler hook-set behaviour relative to hook type on capture success and incidences of deep hooking and injury in a teleost fish. Fisheries Research 164: 201-205.
Shiffman, D.S., A.J. Gallagher, J. Wester, C.C. Macdonald, A.D. Thaler, S.J. Cooke, and N. Hammerschlag. 2015. A letter of clarification from the authors of “trophy fishing for species threatened with extinction”. Marine Policy 53: 213-214.
Tuor, K.M.F., K.E. Smokorowski and S.J. Cooke. 2015. The influence of fluctuating ramping rates on the diets of small-bodied fish species of boreal rivers. Environmental Biology of Fishes 98:345-355.
Cull, F., C.D. Suski, A. Shultz, A.J. Danylchuk, C.M. O’Connor, K.J. Murchie and S.J. Cooke. 2015. Consequences of experimental cortisol manipulations on the thermal biology of the checkered puffer (Sphoeroides testudineus) in laboratory and field environments. Journal of Thermal Biology 47:63-74.
Bliss, S.M., J.D. Midwood, K.M. Stamplecoskie and S.J. Cooke. 2015. Seasonal movements and residency of small-bodied fish in a north temperate urban watershed demonstrate connectivity between a stream and stormwater drain. Hydrobiologia 742:327-338.
2014
Hammerschlag, N., S.J. Cooke, A.J. Gallagher and B.J. Godley. 2014. Considering the fate of electronic tags: user responsibility and interactions with stakeholders and other scientists when encountering tagged aquatic animals. Methods in Ecology and Evolution 11:1147-1153.
Cooke, S.J. 2014. Making way for migratory fish. Book review of Running Silver: Restoring Atlantic Rivers and Their Great Fish Migrations. John Waldman. Lyons Press. BioScience 64:1053-1054.
Burnett, N.J., S.G. Hinch, D.C. Braun, M.T. Casselman, C.T. Middleton, S.M Wilson, and S.J. Cooke. 2014. Burst swimming in areas of high flow: delayed consequences of anaerobiosis in wild adult sockeye salmon. Physiological and Biochemical Zoology 87:587-598.
Samson, E., J.W. Brownscombe and S.J. Cooke. 2014. Behavioural and reflex responses of mottled mojarra Eucinostomus lefroyi (Gerreidae) to cold shock exposure. Aquatic Biology. 23: 101-108.
Hayden, T.A., C.M. Holbrook, D. Fielder, C.S. Vandergoot, R.A. Bergstedt, J.M. Dettmers, C.C. Krueger and S.J. Cooke. 2014. Acoustic telemetry reveals large-scale migration patterns for walleye in Lake Huron. PLoS One DOI:10.1371/journal.pone.0114833
Brownscombe, J.W., K. Marchand, K. Tisshaw, V. Fewster, O. Groff, M. Pichette, M. Seed, L.F.G. Gutowsky, A.D.M. Wilson and S.J. Cooke. 2014. The influence of water temperature and accelerometer-determined fight intensity on physiological stress and reflex impairment of angled largemouth bass. Conservation Physiology DOI: 10.1093/conphys/cou057
Donaldson, M.R., S.G. Hinch, C.D. Suski, A.T. Fisk, M.R. Heupel and S.J. Cooke. 2014. Making connections in aquatic ecosystems with acoustic telemetry monitoring. Frontiers in Ecology and Environment 12: 565–573.
Stein, J.A., J.E. Claussen, S.J. Cooke and D.P. Philipp. 2014. Not all biases are created equal: A comment on Snorkel survey bias observed by Hessenauer et al. 2014. North American Journal of Fisheries Management 34:1204-1206.
Finn, J.T., J.W. Brownscombe, C.R. Haak, S.J. Cooke, R. Cormier, T. Gagne, and A.J. Danylchuk. 2014. Applying network methods to acoustic telemetry data: modeling the movements of tropical marine fishes. Ecological Modelling 293: 139-149.
Schwabe, M., T. Meinelt, T.M. Phan, S.J. Cooke and R. Arlinghaus. 2014. Absence of handling-induced Saprolegnian infection in juvenile Rainbow Trout Oncorhynchus mykiss, with implications for catch-and-release angling. North American Journal of Fisheries Management 34:1221-1226.
Halliday, W.D., J.E. Paterson, L.D. Patterson, S.J. Cooke and G. Blouin-Demers. 2014. Testosterone, body size, and sexual signals predict parasite load in Yarrow’s spiny lizards (Sceloporus jarrovii). Canadian Journal of Zoology 92: 1075-1082.
Cooke, S.J., M.R. Donaldson, and T.D. Clark. 2014. Practical guidance for early career researchers dealing with tardy or unresponsive co-authors. Ideas in Evolution and Ecology 7: 73-76.
Bower, S.D., R.J. Lennox and S.J. Cooke. 2014. Is there a role for freshwater protected areas in the conservation of migratory fish? Inland Waters 5: 1-6.
Cooke, S.J., R. Arlinghaus, D. M. Bartley, T.D. Beard, I.G. Cowx, T.E. Essington, O.P. Jensen, A. Lynch, W.W. Taylor, and R. Watson. 2014. Where the waters meet: Sharing ideas and experiences between inland and marine realms to promote sustainable fisheries management. Canadian Journal of Fisheries and Aquatic Sciences 71: 1593-1601. (Invited paper arising from S. Cooke’s J.C. Stevenson Lectureship at CCFFR in Windsor in 2013)
Raby, G.D., M.R. Donaldson, V.M. Nguyen, M.K. Taylor, N.M. Sopinka, K.V. Cook, D.A. Patterson, D. Robichaud, S.G. Hinch, and S.J. Cooke. 2014. Bycatch mortality of endangered coho salmon: impacts, solutions, and aboriginal perspectives. Ecological Applications 24: 1803-1819.
Coristine, L.E., C.M. Robillard, J.T. Kerr, C.M. O’Connor, D. Lapointe and S.J. Cooke. 2014. A conceptual framework for the emerging discipline of conservation physiology. Conservation Physiology DOI: 10.1093/conphys/cou033
Martins, E.G., L.F.G. Gutowsky, P.M Harrison, J.E. Mills Flemming, I.D. Jonsen, D.Z. Zhu, A. Leake, D.A. Patterson, M. Power and S.J. Cooke. 2014. Behavioral attributes of turbine entrainment risk for adult resident fish revealed by acoustic telemetry and state-space modeling. Journal of Animal Biotelemetry 2: 13.
Miller, K.M., A. Teffer, S. Tucker, S. Li, A.D. Schulze, M. Trudel, F. Juanes, A. Tabata, K.H. Kaukinen, N.G. Ginther, T.J. Ming, S.J. Cooke, M. Hipfner, D.A. Patterson, and S.G. Hinch. 2014. Infectious disease, shifting climates and opportunistic predators: cumulative factors potentially impacting wild salmon declines. Evolutionary Applications 7: 812-855.
Bower, S.D., Nguyen, V.M., Danylchuk, A.J., Beard Jr., T.D., and S.J. Cooke. 2014. Inter-sectoral conflict and recreational fisheries of the developing world: Opportunities and challenges for co-operation. In: McConney, P., R. Medeiros and M. Pena. Eds. 2014. Enhancing Stewardship in Small-Scale Fisheries: Practices and Perspectives. Too Big To Ignore (TBTI) and Centre for Resource Management and Environmental Studies, The University of the West Indies, Cave Hill Campus, Barbados. CERMES Technical Report No. 73.
Taylor, M.K., C.T. Hasler, S.G. Hinch, B. Lewis, D.C. Schmidt and S.J. Cooke. 2014. Reach-scale movements of bull trout (Salvelinus confluentus) relative to hydropeaking operations in the Columbia River, Canada. Ecohydrology 7: 1079-1086.
Burnett, N.J., S.G. Hinch, M.R. Donaldson, N.B. Furey, D.A. Patterson, D.W. Roscoe, and S.J. Cooke. 2014. Alterations to dam-spill discharge influence sex-specific activity, behaviour and passage success of migrating adult sockeye salmon. Ecohydrology 7: 1094-1104.
Shiffman, D.S., A.J. Gallagher, J. Wester, C. Macdonald, A.D. Thaler, S.J. Cooke and N. Hammerschlag. 2014. Trophy fishing for species threatened with extinction: a way forward building on a history of conservation. Marine Policy 50: 318-322.
Brownscombe, J.W., L.F. Gutowsky, A.J. Danylchuk and S.J. Cooke. 2014. Foraging behaviour and activity of a marine benthivorous fish estimated using tri-axial accelerometer biologgers. Marine Ecology Progress Series 505: 241-251.
Gale, M.K., S.G. Hinch, S.J. Cooke, M.R. Donaldson, E.J. Eliason, K.M. Jeffries, E.G. Martins and D.A. Patterson. 2014. Observable impairments predict mortality of captured and released sockeye salmon at various temperatures. Conservation Physiology DOI: 10.1093/conphys/cou029
Taylor, M.K., C.T. Hasler, C.S. Findlay, B. Lewis, D.C. Schmidt, S.G. Hinch and S.J. Cooke. 2014. Hydrologic correlates of bull trout (Salvelinus confluentus) swimming activity in a hydropeaking river. River Research and Applications 30: 756-765.
Colotelo, A.H., S.J. Cooke, K. Smokorowski, and T. Haxton. 2014. Comparative evaluation of four presumptive tests for blood to detect epithelial injury on fish. Journal of Fish and Wildlife Management 5: 26-34.
Taylor, M.K., and S.J. Cooke. 2014. Repeatability of movement behaviour in a wild salmonid revealed by telemetry. Journal of Fish Biology 84: 1240 -1246.
Donaldson, M.R., S.G. Hinch, K.M. Jeffries, D.A. Patterson, S.J. Cooke, A.P. Farrell, and K.M. Miller. 2014. Species- and sex-specific responses and recovery of wild, mature Pacific salmon to an exhaustive exercise and air-exposure stressor. Comparative Biochemistry and Physiology A 173: 16-23.
Szekeres, P., J.W. Brownscombe, F. Cull, A.J. Danylchuk, A.D. Shultz, C.D. Suski, K.J. Murchie and S.J. Cooke. 2014. Physiological and behavioural consequences of cold shock on bonefish (Albula vulpes) in The Bahamas. Journal of Experimental Marine Biology and Ecology 459: 1-7.
Jeffrey, J.D., S.J. Cooke and K.M. Gilmour. 2014. Regulation of hypothalamic-pituitary-
Jepsen, N., K. Aarestrup and S.J. Cooke. 2014. Tagging fish in the field: ethical and procedural considerations. A comment on the recent paper of D. Mulcahy; Legal, ethical and procedural bases for the use of aseptic techniques to implant electronic devices. Journal of Fish and Wildlife Management 4: 211-219.
Cooke, S.J. 2014. Reject, Revise, and Resubmit… Please. Ideas in Ecology and Evolution 7: 62-63.
Cooke, S.J., and C.M. O’Connor. 2014. Mentors matter: strategies for selecting the right mentor. Pages 15-21 in W. Taylor, A. Lynch and N. Leonard, Eds. Future of Fisheries: Perspectives for the Next Generation of Professionals. American Fisheries Society, Bethesda, MD.
Raby, G.D., J.R. Packer, A.J. Danylchuk, and S.J. Cooke. 2014. The understudied and underappreciated role of predation in the mortality of fish released from fishing gears. Fish and Fisheries 15: 489-505.
Cooke, S.J., S.S. Killen, J.D. Metcalfe, D.J. McKenzie, D. Mouillot, C. Jørgensen and M.A. Peck. 2014. Conservation physiology across scales: Insights from the marine realm. Conservation Physiology DOI:10.1093/conphys/cou024
Brownscombe, J.W., S.D. Bower, W. Bowden, L. Nowell, J.D. Midwood, N. Johnson and S.J. Cooke. 2014. Canadian recreational fisheries: 35 years of social, biological, and economic dynamics from a national survey. Fisheries 39: 251-260.
Cook, K.V., G.T. Crossin, D.A. Patterson, S.G. Hinch, K.M. Gilmour and S.J. Cooke. 2014. The stress response predicts migration failure but not migration rate in a semelparous fish. General and Comparative Endocrinology 202: 44-49.
Cousineau, A., J.D. Midwood, K. Stamplecoskie, G. King, C.D. Suski, and S.J. Cooke. 2014. Diel patterns of baseline glucocorticoids and stress responsiveness in a teleost fish. Canadian Journal of Zoology 92: 417-421.
Brownscombe, J.W., L. Nowell, E. Samson, A.J. Danylchuk, and S.J. Cooke. 2014. Fishing-related stressors inhibit refuge-seeking behavior in released sub-adult great barracuda, Sphyraena barracuda. Transactions of the American Fisheries Society 143: 613-617.
Stoot, L.J., N.A. Cairns, F. Cull, J.J. Taylor, J.D. Jeffrey, F. Morin, J.W. Mandelman, T.D. Clark and S.J. Cooke. 2014. Use of portable blood physiology point-of-care devices for basic and applied research on vertebrates – a review. Conservation Physiology DOI: 10.1093/conphys/cou011
Chapman, J.M., C.L. Proulx, M.A.N. Veilleux, C. Levert, S. Bliss, M-È. André, N.W.R. Lapointe and S.J. Cooke. 2014. Clear as mud: A meta-analysis on the effects of sedimentation on freshwater fish and the effectiveness of sediment control measures. Water Research 56: 190-202.
Wilson, S.M., J.J. Taylor, T.A. Mackie, D.A. Patterson, S.J. Cooke, and W.G. Willmore. 2014. Oxidative stress in Pacific salmon (Oncorhynchus spp.) during spawning migration. Physiological and Biochemical Zoology 87: 346-352.
Hasler, C.T., E. Guimond, B. Mossop, S.G. Hinch, and S.J. Cooke. 2014. Effectiveness of pulse flows in a regulated river for inducing upstream movement of an imperiled stock of Chinook salmon. Aquatic Sciences 76: 231-241.
O’Connor, C.M., D.R. Norris, G.T. Crossin and S.J. Cooke. 2014. Biological carryover effects: linking common concepts and mechanisms in ecology and evolution. Ecosphere 5(3): article 28 DOI: 10.1890/ES13-00388.1
Rapp, T., J. Hallermann, S.J. Cooke, S.K. Hetz, S. Wuertz and R. Arlinghaus. 2014. Consequences of air exposure on the physiology and behavior of caught-and-released Common Carp in the laboratory and under natural conditions. North American Journal of Fisheries Management 34: 232-246.
Lennox, R., and S.J. Cooke. 2014. State of the interface between conservation and physiology: a bibliometric analysis. Conservation Physiology DOI: 10.1093/conphys/cou003
Muhametsafina, A., J.D. Midwood, S.M. Bliss, K.M. Stamplecoskie and S.J. Cooke. 2014. The fate of dead fish tagged with biotelemetry transmitters in an urban stream. Aquatic Ecology 48: 23-33.
Kessel S. T., S.J. Cooke, M.R. Heupel, N.E. Hussey, C.A. Simpfendorfer, S. Vagle, and A.T. Fisk. 2014. A review of detection range testing in aquatic passive acoustic telemetry studies. Reviews in Fish Biology and Fisheries 24: 199-218.
Danylchuk, A.J., C.D. Suski, J.W. Mandelman, K.J. Murchie, C.R. Haak, A.M.L. Brooks and S.J. Cooke. 2014. Hooking injury, physiological status, and short-term mortality following catch-and-release recreational angling of juvenile lemon sharks (Negaprion bevirostris) in The Bahamas. Conservation Physiology DOI: 10.1093/conphys/cot036
Wilson, S.M., G.D. Raby, N.J. Burnett, S.G. Hinch, and S.J. Cooke. 2014.. Looking beyond the mortality of bycatch: sublethal effects of incidental capture on marine animals. Biological Conservation 171: 61-72.
Cooke, S.J., and M.R. Donaldson. 2014. Self-citation by researchers: narcissism or an inevitable outcome of a cohesive and sustained research program? Ideas in Ecology and Evolution 7: 1-2.
Raison, T., A. Nagrodski, C.D. Suski and S.J. Cooke. 2014. Exploring the potential effects of lost or discarded soft plastic fishing lures on fish and the environment. Water, Air, and Soil Pollution 225: 1869.
Lapointe, N.W.R., S.J. Cooke, J.G. Imhof, D. Boisclair, J.M. Casselman, R.A. Curry, O.E. Langer, R.L. McLaughlin, C.K. Minns, J.R. Post, M. Power, J.B. Rasmussen, J.D. Reynolds, J.S. Richardson, and W.M. Tonn. 2014. Principles for ensuring healthy and productive freshwater ecosystems that support sustainable fisheries. Environmental Reviews 22: 1-25.
Midwood, J.D., Larsen, M.H., Boel, M., Jepsen, N., Aarestrup, K., & Cooke, S.J. 2014. Does cortisol manipulation influence outmigration behaviour, survival and growth of sea trout? A field-test of carryover effects in wild fish. Marine Ecology Progress Series 496: 135-144.
Drenner, S.M., S.G. Hinch, E.G. Martins, D. Robichaud, L.A. Thompson, D.A. Patterson, S.J. Cooke and R.E. Thomson. 2014. Variable thermal experience and diel thermal patterns of homing sockeye salmon in coastal marine waters. Marine Ecology Progress Series 496: 109-124.
Gallagher, A.J., Serafy, J.E., Cooke, S.J., Hammerschlag, N. 2014. Physiological stress response, reflex impairment, and survival of five sympatric shark species following experimental capture and release. Marine Ecology Progress Series 496: 207-218.
Crossin, G.T., S.J. Cooke, J.A. Goldbogen, and R.A. Phillips. 2014. Tracking fitness in marine vertebrates: a review of current knowledge and opportunities for future research. Marine Ecology Progress Series 496: 1-17.
Wilson, S.M., S.G. Hinch, S.M. Drenner, E.G. Martins, N. B. Furey, D. A. Patterson, D.W. Welch, and S.J. Cooke. 2014. Coastal marine and in-river migration behaviour of adult sockeye salmon en route to spawning grounds. Marine Ecology Progress Series 496: 71-84.
Marriner, B.A., A.B.M. Baki, D.Z. Zhu, J.D. Thiem, S.J. Cooke, and C. Katopodis. 2014. Field and numerical assessment of turning pool hydraulics in a vertical slot fishway. Ecological Engineering 63: 88-101.
Cooke, S.J., V. Messmer, A.J. Tobin, M.S. Pratchett, and T.D. Clark. 2014. Refuge-seeking impairments mirror metabolic recovery following fisheries-related stressors in the Spanish flag snapper (Lutjanus carponotatus) on the Great Barrier Reef. Physiological and Biochemical Zoology 87: 136-147.
Cooke, S.J., D.T. Blumstein, R. Buchholz, T. Caro, E. Fernández-Juricic, C.E. Franklin, J. Metcalfe, C.M. O’Connor, C. Cassidy St. Clair, W.J. Sutherland, and M. Wikelski. 2014. Physiology, behaviour and conservation. Physiological and Biochemical Zoology 87: 1-14.
Hatry, C., J.D. Thiem, T.R. Binder, D. Hatin, P. Dumont, K.M. Stamplecoskie, J.M. Molina, K.E. Smokorowski, and S.J. Cooke. 2014.. Comparative physiology and relative swimming performance of three redhorse (Moxostoma spp.) species: associations with fishway passage success. Physiological and Biochemical Zoology 87: 148-159.
Donaldson, M.R. and S.J. Cooke. 2014. Scientific publications: Moving beyond quality and quantity toward influence. BioScience 64: 12-13.
Nguyen, V.M., E.G. Martins, D. Robichaud, G.D. Raby, M.R. Donaldson, A.G. Lotto, W.G. Willmore, D.A. Patterson, A.P. Farrell, S.G. Hinch, and S.J. Cooke. 2014. Disentangling the roles of air exposure, gillnet injury, and facilitated recovery on the post-capture and release mortality and behavior of adult migratory sockeye salmon (Oncorhynchus nerka) in freshwater. Physiological and Biochemical Zoology 87: 125-135. (focused issue on conservation physiology).
Cooke, S.J. 2014. Conservation physiology today and tomorrow. Conservation Physiology DOI: 10.1093/conphys/cot033 (Editorial)
Rose, J.D., R. Arlinghaus, S.J. Cooke, B.K. Diggles, W. Sawynok, E.D. Stevens and C.D.L. Wynne. 2014. Can fish really feel pain? Fish and Fisheries 15: 97-133.
2013
Harrison, P.M., L.F.G. Gutowsky, E.G. Martins, D.A. Patterson, A. Leake, S.J. Cooke, and M. Power. 2013. Diel vertical migration of adult burbot: A dynamic trade-off between feeding opportunity, predation avoidance, and bioenergetic gain. Canadian Journal of Fisheries and Aquatic Sciences 70: 1765-1774.
Cairns, N.A., L.J. Stoot, G. Blouin-Demers, and S.J. Cooke. 2013. Refinement of bycatch reduction devices to exclude freshwater turtles from commercial fishing nets. Endangered Species Research 22: 251-261.
Cooke, S.J., V.M. Nguyen, K.J. Murchie, J.D. Thiem, M.R. Donaldson, S.G. Hinch, R.S. Brown and A. Fisk. 2013. To tag or not to tag: animal welfare, conservation and stakeholder considerations in fish tracking studies that use electronic tags. Journal of International Wildlife Law & Policy 16: 352-374.
Young, N., I. Gingras, V.M. Nguyen, S.J. Cooke, and S.G. Hinch. 2013. Mobilizing new science into management practice: the challenge of biotelemetry for fisheries management, a case study of Canada’s Fraser River. Journal of International Wildlife Law & Policy 16: 331-351.
Martins, E.G., L.F.G. Gutowsky, P.M. Harrison, D.A. Patterson, M. Power, D. Zhu, A. Leake, and S.J. Cooke. 2013. Forebay use and entrainment rates of resident adult fish in a large hydropower reservoir. Aquatic Biology 19: 253-263.
Nguyen, V.M., S.M. Larocque, L.J. Stoot, N.A. Cairns, G. Blouin-Demers, and S.J. Cooke. 2013. Perspectives of fishers on turtle by-catch and conservation strategies in a small-scale inland commercial hoop net fishery. Endangered Species Research 22: 11-22.
Cooke, S.J., C.D. Suski, R. Arlinghaus, and A.J. Danylchuk. 2013. Voluntary institutions and behaviours as alternatives to formal regulations in recreational fisheries management. Fish and Fisheries 14: 439–457.
Eliason, E.J., S.M. Wilson, A.P. Farrell, S.J. Cooke, and S.G. Hinch. 2013. Low cardiac and aerobic scope in a coastal population of sockeye salmon Oncorhynchus nerka with a short upriver migration. Journal of Fish Biology 82: 2104-2112.
VanderZwaag, D.L., R. Apostle, and S.J. Cooke. 2013. Tracking and protecting marine species at risk: scientific advances, sea of governance challenges. Journal of International Wildlife Law & Policy 16: 105-111.
Nguyen, V.M., M.A. Rudd, S.G. Hinch and S.J. Cooke. 2013. Recreational anglers’ attitudes, beliefs, and behaviors related to catch-and-release practices of Pacific salmon in British Columbia. Journal of Environmental Management 128: 852-865.
Cooke, S.J., N.W.R. Lapointe, E.G. Martins, J.D. Thiem, G.D. Raby, M.K. Taylor, T.D. Beard Jr., and I.G. Cowx. 2013. Failure to engage the public in issues related to inland fishes and fisheries: strategies for building public and political will to promote meaningful conservation. Journal of Fish Biology (Special Issue from World Fisheries Congress) 83: 997-1018.
Gutowsky, L.F.G, P.M. Harrison, E.G. Martins, A. Leake, D.A. Patterson, M. Power, and S.J. Cooke. 2013. Diel vertical migration hypotheses explain size-dependent behaviour in a freshwater piscivore. Animal Behaviour 86: 365-373.
Beardsall, J.W., M.F. McLean, S.J. Cooke, B.W. Wilson, M. J. Dadswell and M.J.W. Stokesbury. 2013. Consequences of incidental otter trawl capture on survival and physiological status of threatened Atlantic sturgeon Acipenser oxyrinchus. Transactions of the American Fisheries Society 142: 1202-1214.
Nitychoruk, J.M., L.F.G. Gutowsky, P.M. Harrison, T.J. Hossie, M. Power, and S.J. Cooke. 2013. Sexual and seasonal dimorphism in adult adfluvial bull trout (Salvelinus confluentus). Canadian Journal of Zoology 91: 480-488.
Stoot, L.J., N.A. Cairns, G. Blouin-Demers, and S.J. Cooke. 2013. Physiological disturbances and behavioural impairment associated with the incidental capture of freshwater turtles in a commercial fyke-net fishery. Endangered Species Research 21: 13-23.
Lapointe, N. W. R., J. D. Thiem, S. E. Doka, and S. J. Cooke. 2013. Opportunities for improving aquatic restoration science and monitoring through the use of animal electronic tagging technology. BioScience 63: 390-396.
Colotelo, A.H., S.J. Cooke, G. Blouin-Demers, K.J. Murchie, T. Haxton, and K. Smokorowski. 2013. Influence of water temperature and net tending frequency on the condition of fish bycatch in a small-scale inland commercial fyke net fishery. Journal for Nature Conservation 21: 217-224.
Hatry C., T.R. Binder, J.D. Thiem, C.T. Hasler, K.E. Smokorowski, K.D. Clarke, Katopodis C., S.J. Cooke. 2013. The status of fishways in Canada: trends identified using the national CanFishPass database. Reviews in Fish Biology and Fisheries 23: 271-281.
Cooke, S. J., & Hinch, S. G. 2013. Improving the reliability of fishway attraction and passage efficiency estimates to inform fishway engineering, science, and practice. Ecological Engineering 58: 123-132.
Robinson, K.A., Hinch, S.G., Gale, M.K., Clark, T.D., Wilson, S.M., Donaldson, M.R., Farrell, A.P., Cooke, S.J., Patterson, D.A. 2013. Effects of post-capture ventilation assistance and elevated water temperature on sockeye salmon in a simulated capture-and-release experiment. Conservation Physiology DOI: 10.1093/conphys/cot015
Murchie, K.J., S.J. Cooke, A.J. Danylchuk, S.E. Danylchuk, T.L. Goldberg, C.D. Suski and D.P. Philipp. 2013. Movement patterns of bonefish (Albula vulpes) in tidal creeks and coastal waters of Eleuthera, The Bahamas. Fisheries Research 147: 404-412.
Cooke, S.J., J.D. Midwood, J.D. Thiem, A.P. Klimley, M.C. Lucas, E.B. Thorstad, J. Eiler, C. Holbrook, and B.C. Ebner. 2013. Tracking animals in freshwater with electronic tags: past, present and future. Animal Biotelemetry 1: 5.
LeDain, M.R.K., S.M. Larocque, L.J. Stoot, N. Cairns, G. Blouin-Demers, and S.J. Cooke. 2013. Assisted recovery following prolonged submergence in fishing nets can be beneficial to turtles: an assessment with blood physiology and reflex impairment. Chelonian Conservation and Biology 12: 172-177.
Steffensen, S.M., J.D. Thiem, K.M. Stamplecoskie, T.R. Binder, C. Hatry, N. Langlois-Anderson, and S.J. Cooke. 2013. Biological effectiveness of an inexpensive nature-like fishway for passage of warmwater fish in a small Ontario stream. Ecology of Freshwater Fish 22:374-383
Thiem, J.D., T.R. Binder, P. Dumont, D. Hatin, C. Hatry, C. Katopodis, K.M. Stamplecoskie, and S.J. Cooke. 2013. Multi-species fish passage behaviour in a vertical slot fishway on the Richelieu River, Quebec, Canada. River research and Applications 29:582-592
Walker, R.W., R.S. Brown, K.A. Deters, M.B. Eppard, and S.J. Cooke. 2013. Does UV disinfection compromise sutures? An evaluation of tissue response and suture retention in salmon surgically implanted with transmitters. Fisheries Research 147:32-35
Cooke, S.J., L. Sack, C.E. Franklin, A.P. Farrell, J. Beardall, M. Wikelski and S.L.Chown. 2013. What is conservation physiology? Perspectives on an increasingly integrated and essential science. Conservation Physiology DOI:10.1093/conphys/cot001 (inaugural paper for this journal)
Thiem, J.D., C. Hatry, J.W. Brownscombe, F. Cull, A.D. Shultz, A.J. Danylchuk, and S.J. Cooke. 2013. Evaluation of radio telemetry to study the spatial ecology of checkered puffers (Sphoeroides testudineus) in shallow tropical marine systems. Bulletin of Marine Science 89:559-569
Nagrodski, A., K.J. Murchie, K.M. Stamplecoskie, C.D. Suski, and S.J. Cooke. 2013. Effects of an experimental short-term cortisol challenge on the behaviour of wild creek chub (Semotilus atromaculatus) in mesocosm and stream environments. Journal of Fish Biology 82:1138-1158
Arlinghaus, R., S.J. Cooke, and W. Potts. 2013. Towards resilient recreational fisheries on a global scale through improved understanding of fish and fisher behaviour. Fisheries Management and Ecology 20:91-98
Cooke, S.J., M.R. Donaldson, C.M. O’Connor, G.D. Raby, R. Arlinghaus, A.J. Danylchuk, K.C. Hanson, S.G. Hinch, T.D. Clark, D.A. Patterson, and C.D. Suski. 2013. The physiological consequences of catch-and-release angling: perspectives on experimental design, interpretation, extrapolation, and relevance to stakeholders. Fisheries Management and Ecology 20:268-287
Thiem, J.D., D. Hatin, P. Dumont, G. Van Der Kraak, and S.J. Cooke. 2013. Biology of lake sturgeon (Acipenser fulvescens) spawning below a dam on the Richelieu River, Quebec: behaviour, egg deposition and endocrinology. Canadian Journal of Zoology 91:175-186
Raby, G.D., S.J. Cooke, K.V. Cook, S.H. McConnachie, M.R. Donaldson, S.G. Hinch, C.K. Whitney, S.M. Drenner, D.A. Patterson, T.D. Clark, and A.P. Farrell. 2013. Resilience of pink salmon and chum salmon to simulated capture stress incurred upon arrival at spawning grounds. Transactions of the American Fisheries Society 142:524-539
Collins, A.L., S.G. Hinch, D.W. Welch, S.J. Cooke, and T.D. Clark. 2013. Intracoelomic acoustic tagging of juvenile sockeye salmon: swimming performance, survival, and post-surgical wound healing in freshwater and during a transition to seawater. Transactions of the American Fisheries Society 142:515-523
Donaldson, M.R., G.D. Raby, V.N. Nguyen, S.G. Hinch, D.A. Patterson, A.P. Farrell, M. Rudd, L.A. Thompson, C.M. O’Connor, A.H. Colotelo, S.H. McConnachie, K.V. Cook, D. Robichaud, K.K. English, and S.J. Cooke. 2013. Evaluation of a simple technique for recovering Pacific salmon from capture stress: integrating comparative physiology, biotelemetry, and social science to solve a conservation problem. Canadian Journal of Fisheries and Aquatic Sciences 70:90-100
Brownscombe, J.W., J.D. Thiem, C. Hatry, F. Cull, C.R. Haak, A.J. Danylchuk, and S.J. Cooke. 2013. Recovery bags reduce post-release impairments in locomotory activity and behaviour of bonefish (Albula spp.) following exposure to angling-related stressors. Journal of Experimental Marine Biology and Ecology 440:207-215
O’Connor, C.M., M. Nannini, D.H. Wahl, S.M. Wilson, K.M. Gilmour, and S.J. Cooke. 2013. Sex-specific consequences of experimental cortisol elevation in pre-reproductive largemouth bass. Journal of Experimental Zoology A 319:23-31
Nagrodski, A., C.D. Suski, and S.J. Cooke. 2013. Health, condition, and survival of creek chub (Semotilus atromaculatus) across a gradient of stream habitat quality following an experimental cortisol challenge. Hydrobiologia 702:283-296
Wilson, S.M., S.G., Hinch, E.J. Eliason, A.P. Farrell, and S.J. Cooke. 2013. Calibrating acoustic transmitters for estimating energy use by wild adult Pacific salmon. Comparative Biochemistry and Physiology 164:491-498
Burnett, N.J., K.M. Stamplecoskie, J.D. Thiem, S.J. Cooke. 2013. Comparison of detection efficiency among three sizes of half duplex passive integrated transponders using manual tracking and fixed antenna arrays. North American Journal of Fisheries Management 33:7-13
Gravel, M.-A., and S.J. Cooke. 2013. Does nest predation pressure influence the energetic cost of nest guarding in a teleost fish? Environmental Biology of Fishes 96:93-107
Trushenski, J.T., J.D. Bowker, S.J. Cooke, D. Erdahl, T. Bell, J.R. MacMillan, R.P. Yanong, J.E. Hill, M.C. Fabrizio, J.E. Garvey, and S. Sharon. 2013. Issues regarding the use of sedatives in fisheries and the need for immediate-release options. Transactions of the American Fisheries Society 142:156-170
Colotelo, A.H., G.D. Raby, C.T. Hasler, T.J. Haxton, K.E. Smokorowski, G. Blouin-Demers, and S.J. Cooke. 2013. Northern pike bycatch in an inland commercial hoop net fishery: effects of water temperature and net tending frequency on injury, physiology, and survival. Fisheries Research 137:41-49
2012
Cooke, S.J., S.G. Hinch, M.C. Lucas, and M. Lutcavage. 2012. Chapter 18 – Biotelemetry and biologging. Pages 819-860 in A. V. Zale, D. L. Parrish, and T. M. Sutton, editors. Fisheries Techniques, Third Edition. American Fisheries Society, Bethesda, Md.
Sutter, D.A.H., C.D. Suski, D.P. Philipp, T. Klefoth, D.H. Wahl, P. Kersten, S.J. Cooke, and R. Arlinghaus. 2013. Recreational fishing selectively captures individuals with the highest fitness potential. Proceedings of the National Academy of Sciences USA 109:20960-20965
Taylor, M.K., and S.J. Cooke. 2012. Meta-analyses of the effects of river flow on fish movement and activity. Environmental Reviews 20:211-219
Nguyen, V.M., G.D. Raby, S.G. Hinch, and S.J. Cooke. 2012. Aboriginal fisher perspectives on use of telemetry technology to study adult Pacific salmon. Knowledge and Management of Aquatic Ecosystems 406:08
Martins, E.G., S.G. Hinch, S.J. Cooke and D.A. Patterson. 2012. Climate effects on growth, phenology, and survival of sockeye salmon (Oncorhynchus nerka): a synthesis of the current state of knowledge and future research directions. Reviews in Fish Biology and Fisheries 22:887-914
Cooke, S.J., and N.W.R. Lapointe. 2012. Addressing editor(ial) malpractice in scientific journals. Ideas in Ecology and Evolution 5:84-92
Donaldson, M.R., S.G. Hinch, G.D. Raby, D.A. Patterson, A.P. Farrell, and S.J. Cooke. 2012. Population- specific consequences of fisheries-related stressors on adult sockeye salmon. Physiological and Biochemical Zoology (focused issue on intraspecific variation in physiology and behavior) 85:729-739
Hasler, C.T., B. Mossop, D.A. Patterson, S.G. Hinch, and S.J. Cooke. 2012. Swimming activity of migrating Chinook salmon in a regulated river. Aquatic Biology 17:47-56
Pon, L.B., S.G. Hinch, C.D. Suski, D.A. Patterson, and S.J. Cooke. 2012. The effectiveness of tissue biopsy as a means of assessing the physiological consequences of fishway passage. River Research and Applications 28:1266-1274
UN FAO. Recreational fisheries. FAO Technical Guidelines for Responsible Fisheries. No. 13. Rome, FAO 2012. 176 pp. (Written under contract by R. Arlinghaus, S.J. Cooke and B. Johnson)
Murchie, K.J., A.J. Danylchuk, S.J. Cooke, A.C. O’Toole, A. Shultz, C. Haak, E. Brooks, and C.D. Suski. 2012 Considerations for tagging and tracking fish in tropical coastal habitats: lessons from bonefish, barracuda, and sharks tagged with acoustic transmitters. American Fisheries Society Special Publication – Handbook of Fish Telemetry. Bethesda, MD. pp. 389-412.
Taylor, M.K., K. V. Cook, C. T. Hasler, D. C. Schmidt, and S. J. Cooke. 2012. Behavioural and physiological responses of free-swimming mountain whitefish Prosopium williamsoni relative to short term changes in river flow. Ecology of Freshwater Fish 21:609-616
Robert, J.J., S.M. Larocque, and S.J. Cooke. 2012. Influence of hook size and style on short-term survival of deeply hooked bluegill. North American Journal of Fisheries Management 32:869-874
Molina, J.M., and S.J. Cooke. 2012. Trends in shark bycatch research: current status and research needs. Reviews in Fish Biology and Fisheries 22:719-737
Binder, T.R., M.A. Nannini, D.H. Wahl, R. Arlinghaus, T. Klefoth, D.P. Philipp and S.J. Cooke. 2012. Largemouth bass, Micropterus salmoides, selected for differential vulnerability to angling exhibit similar routine locomotory activity in experimental ponds. Transactions of the American Fisheries Society 141:1252-1259
Nguyen, V.M., M. Rudd, S.J. Cooke and S.G. Hinch. 2012. Differences in information use and preferences among recreational salmon anglers: implications for management initiatives to promote responsible fishing. Human Dimensions of Wildlife 17:248-256
Serafy, J.E., S.J. Cooke, G.A. Diaz, J. Graves, M. Hall, M. Shivji, and Y. Swimmer. 2012. Evaluating circle hooks in commercial, recreational and artisanal fisheries: research status and needs for improved conservation and management. Bulletin of Marine Science 88:371-391
Cooke, S.J., V.M. Nguyen, K.J. Murchie, A.J. Danylchuk and C.D. Suski. 2012. Scientific and stakeholder perspectives on the use of circle hooks in recreational fisheries. Bulletin of Marine Science 88:395-410
Johnson, J.E., D.A. Patterson, E.G. Martins, S.J. Cooke and S.G. Hinch. 2012. Quantitative methods for analyzing cumulative effects on fish migration success – a review. Journal of Fish Biology 81:600-631 (Special issue on fish migration)
Hinch, S.G., S.J. Cooke, A.P. Farrell, K.M. Miller, M. Lapointe, and D.A. Patterson. 2012. Dead fish swimming: early migration and premature mortality in adult Fraser River sockeye salmon. Journal of Fish Biology 81:576-599 (Special issue on fish migration)
Clark, T.D., M.R. Donaldson, S. Pieperhoff, S.M. Drenner, A. Lotto, S.J. Cooke, S.G. Hinch, D.A. Patterson, and A.P. Farrell. 2012. Physiological benefits of being small in a changing world: responses of coho salmon (Oncorhynchus kisutch) to an acute thermal challenge and a simulated capture event. PLoS One 7:e39079
McConnachie, S.H., K.V. Cook, D.A. Patterson, K.M. Gilmour, S.G. Hinch, A.P. Farrell, and S.J. Cooke. 2012. Consequences of acute stress and cortisol manipulation on the physiology, behavior, and reproductive outcome of female Pacific salmon on spawning grounds. Hormones and Behaviour 62:67-76
Wilson, S.M., M-A. Gravel, T.A. Mackie, W.G. Willmore and S.J. Cooke. 2012. Oxidative stress associated with paternal care in smallmouth bass (Micropterus dolomieu). Comparative Biochemistry and Physiology A 162:212-218
Larocque, S.M., P. Watson, G. Blouin-Demers, and S.J. Cooke. 2012. Accidental bait: do deceased fish increase freshwater turtle bycatch in commercial fyke nets? Environmental Management 50:31-38
Diggles, B.K., S.J. Cooke, J.D. Rose, and W. Sawynok. 2012 . Response to Torgersen et al. (2011): Reply to Diggles et al. (2011): Ecology and welfare of aquatic animals in wild capture fisheries. Reviews in Fish Biology and Fisheries 22:367-369
Cooke, S.J., C. Paukert and Z. Hogan. 2012. Endangered river fish: Factors hindering conservation and restoration. Endangered Species Research 17:179-191
O’Toole, A., M.Y. Dechraoui Bottein, A.J. Danylchuk, J.S. Ramsdell and S.J. Cooke. 2012. Linking ciguatera poisoning to spatial ecology of fish: a novel approach to examining the distribution of biotoxin levels in the great barracuda by combining biotelemetry and non-lethal blood. Science of the Total Environment 427-428:98-105
McConnachie, S.H., C.M. O’Connor, K.M. Gilmour, G.K. Iwama, and S.J. Cooke. 2012. Supraphysiological cortisol elevation alters the response of wild bluegill sunfish to subsequent stressors. Journal of Experimental Zoology – Part A 317:321-332
Nielsen, J.K., G.H. Niezgoda, S.J. Taggart, S.J. Cooke, P. Anson, C.T. Hasler, K.C. Hanson, and G. Carl. 2012. Mobile positioning of tagged aquatic animals using acoustic telemetry with a synthetic hydrophone array (SYNAPS: Synthetic Aperture Positioning System). American Fisheries Society Symposium Proceedings 76:233-250.
Cooke, S.J., and E.B. Thorstad. 2012. Is radio telemetry getting washed downstream? The changing role of radio telemetry in studies of freshwater ichthyofauna relative to other tagging and telemetry technology. American Fisheries Society Symposium 76:349-369.
Cooke, S.J., S.G. Hinch, M.R. Donaldson, T.D. Clark, E.J. Eliason, G.T. Crossin, G.D. Raby, K.M. Jeffries, M. Lapointe, K. Miller, D.A. Patterson, and A.P. Farrell. 2012. Conservation physiology in practice: How physiological knowledge has improved our ability to sustainably manage Pacific salmon during up-river migration. Philosophical Transactions of the Royal Society B 367:1757-1769 . (invited contribution)
O’Connor, C.M., B.L. Barthel, K.M. Gilmour, D.P. Philipp, G. Van Der Kraak, and S.J. Cooke. 2012. Reproductive history and nest environment are correlated with circulating androgen and glucocorticoid concentrations in a parental care-providing teleost fish. Physiological and Biochemical Zoology 85:209-218
Brooks, E.J., J.W. Mandelman, K.A. Sloman, S. Liss, A.J. Danylchuk, S.J. Cooke, G.B. Skomal, D.P. Philipp, D.W. Sims, and C.D. Suski. 2012. The physiological response of the Caribbean reef shark (Carcharhinus perezi) to longline capture. Comparative Biochemistry and Physiology A 162:94-100
Nagrodski, A., G.D. Raby, C.T. Hasler, M.K. Taylor, and S.J. Cooke. 2012. Fish stranding in freshwater systems: sources, consequences, and mitigation. Journal of Environmental Management 103:133-141
Larocque, S., S.J. Cooke and G. Blouin-Demers. 2012. A breath of fresh air: avoiding anoxia and mortality of freshwater turtles in fyke nets via the use of floats. Aquatic Conservation 22:198-205
Arlinghaus, R., T.D. Beard, Jr., S.J. Cooke, and I.G. Cowx. 2012. Benefits and risks of adopting the code of practice for recreational fisheries. Fisheries 37:165-172
Hasler, C.T., S.J. Cooke, S.G. Hinch, E. Guimond, M.R. Donaldson, B. Mossop, and D.A. Patterson. 2012. Thermal biology and bioenergetics of different upriver migration strategies in a stock of summer-run Chinook salmon. Journal of Thermal Biology (special issue on behavioural thermoregulation and telemetry) 37:265-272
Larocque, S.M., S.J. Cooke, and G. Blouin-Demers. 2012. Mitigating bycatch of freshwater turtles in passively-fished fyke nets through the use of exclusion and escape modifications. Fisheries Research 125-126:149-155
Rapp, T., J. Hallermann, S.J. Cooke, S.K. Hetz, S. Wuertz, and R. Arlinghaus. 2012. Physiological and behavioural consequences of capture and retention in carp sacks on common carp (Cyprinus carpio L.), with implications for catch-and-release recreational fishing. Fisheries Research 125-126:57-68
Drenner, S.M., T.D. Clark, C.K. Whitney, E.G. Martins, S.J. Cooke, and S.G. Hinch. 2012. A synthesis of tagging studies examining the behaviour and survival of anadromous salmonids in marine environments. PLoS One 7:e31311
Larocque, S., A.H. Colotelo, S.J. Cooke, G. Blouin-Demers, T. Haxton, and K.E. Smokorowski. 2012. Seasonal patterns in bycatch composition and mortality associated with a freshwater hoop net fishery. Animal Conservation 15:53-60.
Martins, E.G., S.G. Hinch, D.A. Patterson, M.J. Hague, S.J. Cooke, K.M. Miller, D.Robichaud, K.K. English and A.P. Farrell. 2012. High river temperature reduces survival of sockeye salmon approaching spawning grounds and exacerbates female mortality. Canadian Journal of Fisheries and Aquatic Sciences 69:330-342
Flores, A.-M., J.M. Shrimpton, D.A. Patterson, J.A. Hills, S.J. Cooke, T. Yada, S. Moriyama, S.G. Hinch, and A.P. Farrell. 2012. Physiological and molecular endocrine changes in maturing wild sockeye salmon, Oncorhynchus nerka, during ocean and river migration. Journal of Comparative Physiology B 182:77-90
Jeffries, K.M., S.G. Hinch, E.G. Martins, T.D. Clark, A.G. Lotto, D.A. Patterson, S.J. Cooke, A.P. Farrell and K.M. Miller. 2012. Sex and proximity to reproductive maturity influence the survival, final maturation, and blood physiology of Pacific salmon exposed to high temperature during a simulated migration. Physiological and Biochemical Zoology 85:62-73
Raby, G.D., M.R. Donaldson, S.G. Hinch, D.A. Patterson, A.G. Lotto, D. Robichaud, K.K. English, W.G. Willmore, A.P. Farrell, M.W. Davis, and S.J. Cooke. 2012. Validation of reflex indicators for measuring vitality and predicting the delayed mortality of wild coho salmon bycatch released from fishing gears. Journal of Applied Ecology 49:90-98
Stein, J.A., A.D. Schultz, S.J. Cooke, A.J. Danylchuk, K. Hayward and C.D. Suski. 2012. The influence of hook size, type, and location on hook retention and survival of angled bonefish (Albula vulpes). Fisheries Research 113:147-152
2011
Brooks, E.J., K.A. Sloman, S. Liss, L. Hassan-Hassanein, A.J. Danylchuk, S.J. Cooke, J.W. Mandelman, G.B. Skomal, D.W. Sims and C.D. Suski. 2011. The stress physiology of extended duration tonic immobility in the juvenile lemon shark, Negaprion brevirostris (Poey 1868). Journal of Experimental Marine Biology and Ecology 409:351-360
Vandergoot, C.S., K.J. Murchie, S.J. Cooke, J.M. Dettmers, R.A. Bergstedt, and D.G. Fielder. 2011. Evaluation of two forms of electroanesthesia and carbon dioxide for short-term anesthesia in walleye. North American Journal of Fisheries Management 31:914-922
Cooke, S.J. 2011. On the basic-applied continuum in ecology and evolution and a call to action – perspectives of an early career researcher in academia. Ideas in Ecology and Evolution 4:37-39 (Invited editorial)
Cooke, S.J., S.J. Iverson, M.J.W. Stokesbury, S.G. Hinch, A.T. Fisk, D.L. VanderZwaag, R. Apostle, and F. Whoriskey. 2011. Ocean Tracking Network Canada: A network approach to addressing critical issues in fisheries and resource management with implications for ocean governance. Fisheries 36:583-592
Cook, K.V., S.H. McConnachie, K.M. Gilmour, S.G. Hinch and S.J. Cooke. 2011. Fitness and behavioral correlates of pre-stress and stress-induced plasma cortisol titers in pink salmon (Oncorhynchus gorbuscha) upon arrival at spawning grounds. Hormones and Behaviour 60:489-497
Binder T.R., S.J. Cooke, and S.G. Hinch. 2011. The biology of fish migration. In: Farrell, A.P. (ed.), Encyclopedia of Fish Physiology: From Genome to Environment, volume 3, pp. 1921-1927. San Diego: Academic Press.
Cooke, S.J., G.T. Crossin, and S.G. Hinch. 2011. Pacific salmon migration: completing the cycle. In: Farrell, A.P. (ed.), Encyclopedia of Fish Physiology: From Genome to Environment, volume 3, pp. 1945-1952. San Diego: Academic Press.
Gale, M.K., S.G. Hinch, E.J. Eliason, S.J. Cooke, and D.A. Patterson. 2011. Physiological impairment of adult sockeye salmon in fresh water after simulated capture-and-release across a range of temperatures. Fisheries Research 112:85-95
Cook, K.V., C.M. O’Connor, K.M. Gilmour, and S.J. Cooke. 2011. The glucocorticoid stress response is repeatable between years in a wild teleost fish. Journal of Comparative Physiology Part A 60:489-497
Cooke, S.J., K.J. Murchie, and A.J. Danylchuk. 2011. Sustainable “seafood” ecolabelling and initiatives in the context of inland fisheries: needs and opportunities to increase food security and protect freshwater ecosystems. BioScience 61:911-918
Taylor, M.K., K.V. Cook, B. Lewis, D. Schmidt and S.J. Cooke. 2011. Effects of intracoelomic radio transmitter implantation on mountain whitefish (Prosopium williamsoni). Northwest Science 85:542-548
Hahn, L., A.A. Agostinho, K.K. English, J. Carosfeld, L. Fernando da Câmara, and S.J. Cooke. 2011. Use of radiotelemetry to track threatened dorados Salminus brasiliensis in the upper Uruguay River, Brazil. Endangered Species Research 15:103-114
Diggles, B.K., S.J. Cooke, J.D. Rose, and W Sawynok. 2011. Ecology and welfare of aquatic animals in wild capture fisheries. Reviews in Fish Biology and Fisheries 21:739-765
Cooke, S.J., C. Hatry, C.T. Hasler, and K.E. Smokorowksi. 2011. Literature review, synthesis and proposed guidelines related to the biological evaluation of “fish friendly” very low head turbine technology in Canada. Canadian Technical Report of Fisheries and Aquatic Sciences 2931.
Smokorowski, K.E., D. Boisclair, N. Bergeron, K. Clarke, S.J. Cooke, R. Cunjak, J. Dawson, B. Eaton, F. Hicks, P. Higgins, C. Katopodis, M. Lapointe, P. Legendre, M. Power, R. Randall, J. Rasmussen, G. Rose, A. Saint-Hilaire, B. Sellars, G. Swanson, N. Winfield, R. Wysocki, and D. Zhu. 2011. NSERC’s HydroNet: A national research network to promote sustainable hydropower and healthy aquatic ecosystems. Fisheries 36:480-488
Nannini, M.A., D.H. Wahl, S.J. Cooke, and D.P. Philipp. 2011. The influence of selection for vulnerability to angling on foraging ecology in largemouth bass (Micropterus salmoides). Journal of Fish Biology 79:1017-1028
Thiem, J.D., T.R. Binder, J.W. Dawson, P. Dumont, D. Hatin, C. Katopodis, D.Z. Zhu, and S.J. Cooke. 2011. Behaviour and passage success of upriver-migrating lake sturgeon (Acipenser fulvescens) in a vertical slot fishway on the Richelieu River, Quebec. Endangered Species Research 15:1-11
Clark, T.D., M.R. Donaldson, S.M. Drenner, S.G. Hinch, D.A. Patterson, J. Hills, V. Ives , J.J. Carter, S.J. Cooke, and A.P. Farrell. 2011. The efficacy of field techniques for obtaining and storing blood samples from fish. Journal of Fish Biology 79:1322-1333
Hatry, C., T.R. Binder, C.T. Hasler, K.D. Clarke, C. Katopodis, K.E. Smokorowski, and S.J. Cooke. 2011. Development of a national fish passage database for Canada (CanFishPass) : rationale, approach, utility, and potential applicability to other regions. Canadian Water Resources Journal 36:219-228
Schäfer, R.B., S.J. Cooke, R. Arlinghaus, N. Bonada, F. Brischoux, A.F. Casper, J.A. Catford, and V. Rolland 2011. Early career researchers’ perspectives on the current and future state of the scientific publication process in ecology. Freshwater Biology 56:2405-2412
O’Toole, A.C., A.J. Danylchuk, T.L. Goldberg, C.D. Suski, D.P. Philipp, E. Brooks and S.J. Cooke. 2011. Spatial ecology and residency patterns of adult great barracuda (Sphyraena barracuda) in coastal waters of The Bahamas. Marine Biology 158:2227-2237
Hasler, C.T., G.C. Christie, J. Imhof, M. Power, and S.J. Cooke. 2011. A network approach to addressing strategic fisheries, aquaculture and aquatic sciences issues at a national scale: an introduction to a series of case studies from Canada. Fisheries 36:450-453
Stokesbury, M.J.W., J.D. Neilson, E. Susko and S.J. Cooke. 2011. Estimating mortality of Atlantic bluefin tuna (Thunnus thynnus) in an experimental recreational catch-and-release fishery. Biological Conservation 144:2684-2691
Danylchuk, A.J., S.J. Cooke, T.L. Goldberg, C.D. Suski, K.J. Murchie, S.E. Danylchuk, A. Shultz, C.R. Haak, E. Brooks, A. Oronti, J.B. Koppelman, and D.P. Philipp. 2011. Aggregations and offshore movements as indicators of spawning activity of bonefish (Albula vulpes) in The Bahamas. Marine Biology 158:1981-1999
O’Connor, C.M., K.M. Gilmour, G. Van Der Kraak and S.J. Cooke. 2011. Circulating androgens are influenced by parental nest defense in a wild teleost fish. Journal of Comparative Physiology A 197:711-715
Danylchuk, A.J., S.J. Cooke, C.D. Suski, T.L. Goldberg, J.D. Petersen, and S.E. Danylchuk.2011. Involving recreational anglers in developing best handling practices for catch-and-release fishing of bonefish (Albula spp): a model for citizen science in an aquatic setting. American Fisheries Society Symposium 75:95-111
Landsman, S.J., H.J. Wachelka, C.D. Suski and S.J. Cooke. 2011. Evaluation of the physiology, and survival of adult muskellunge (Esox masquinongy) captured and released by specialized anglers. Fisheries Research 110:377-386
Donaldson, M.R., C.M. O’Connor, L.A. Thompson, A.J. Gingerich, S.E. Danylchuk, R.R. Duplain, and S.J. Cooke. Contrasting global game fish and non-game fish species. Fisheries 36:385-397
Landsman, S.J., V.M. Nguyen, L.F.G. Gutowsky, J. Gobin, K.V. Cook, T.R. Binder, N. Lower, R.L. McLaughlin, and S.J. Cooke. 2011. Fish movement and migration studies in the Laurentian Great Lakes: research trends and knowledge gaps. Journal of Great Lakes Research 37:365-379
Beard, T.D., R. Arlinghaus, D. Bartley, S.J. Cooke, S. de Silva, P. McIntyre and I.G. Cowx. 2011. Ecosystem approach to inland fisheries: research needs and implementation strategies. Biology Letters 7:481-483
Hasler, C.T., A.H. Colotelo, T. Rapp, E. Jamieson, K. Bellehumeur, R. Arlinghaus, and S.J. Cooke. 2011. Opinions of fisheries researchers, managers, and anglers towards recreational fishing issues: an exploratory analysis for North America. American Fisheries Society Symposium 75: 51-74
Hasler, C.T., M.R. Donaldson, R.P.B. Sunder, E. Guimond, D.A. Patterson, B. Mossop, S.G. Hinch, and S.J. Cooke. 2011. Osmoregulatory, metabolic and nutritional condition of summer-run male Chinook salmon in relation to their fate and migratory behavior in a regulated river. Endangered Species Research 14:79-89
Wilson, A.D.M., T.R. Binder, K.P. McGrath, S.J. Cooke and J-G. J. Godin. 2011. Capture technique and fish personality: angling targets timid bluegill sunfish, Lepomis macrochirus. Canadian Journal of Fisheries and Aquatic Sciences 68:749-757
Shultz, A.D., K.J. Murchie, C. Griffith, S.J. Cooke, A.J. Danylchuk, T.L. Goldberg and C.D. Suski. 2011. Impacts of dissolved oxygen on the behavior and physiology of bonefish: implications for live-release angling tournaments. Journal of Experimental Marine Biology and Ecology 402:19-26
Danylchuk, A.J., and S.J. Cooke. 2011. Engaging the recreational angling community to implement and manage aquatic protected areas. Conservation Biology 25:458-464
Rudd, M.A., K.F. Beazley, S.J. Cooke, E. Fleishman, D.E. Lane, M.B. Mascia, R. Roth, G. Tabor, J.A. Bakker, T. Bellefontaine, D. Berteaux, B. Cantin, K.G. Chaulk, K. Cunningham, R. Dobell, E. Fast, N. Ferrara, C.S. Findlay, L.K. Hallstrom, T. Hammond, L. Hermanutz, J.A. Hutchings, K.E. Lindsay, T.J. Marta, V. Nguyen, G. Northey, K. Prior, S. Ramirez-Sanchez, J. Rice, D.J.H. Sleep, N.D. Szabo, G. Trottier, J.-P. Toussaint, J.P. Veilleux. 2011 . Generation of priority research questions to inform conservation policy and management at a national level. Conservation Biology 25:476-484
Gutowsky, L.F.G., P.M. Harrison, S.J. Landsman, M. Power, and S.J. Cooke. 2011. Injury and mortality associated with recreational troll capture of bull trout (Salvelinus confluentus) in a reservoir in the Kootenay-Rocky Mountain region of British Columbia. Fisheries Research 109:379-383
Colotelo, A.C., and S.J. Cooke. 2011. Evaluation of common angling-induced sources of epithelial for popular freshwater sport fish using fluorescein. Fisheries Research 109:217-224
Gravel, M-A., C.D. Suski and S.J. Cooke. 2011. Behavioral and physiological consequences of nest predation pressure for larval fish. Behavioural Ecology 22:510-519
Raby, G.D., A.C. Colotelo, G. Blouin-Demers, and S.J. Cooke. 2011. Freshwater commercial bycatch: an understated conservation problem. Bioscience 61:271-280
O’Connor, C.M., K.M. Gilmour, R. Arlinghaus, S. Matsumura, C.D. Suski, D.P. Philipp, and S.J. Cooke. 2011. Short-term cortisol elevation affects individual and population growth rates in wild largemouth bass (Micropterus salmoides). Canadian Journal of Fisheries and Aquatic Sciences 68:693-705
Donaldson, M.R., D.D. Aday, and S.J. Cooke. 2011. A call for ‘mini-reviews’: An effective but underutilized method of synthesizing knowledge to inform and direct fisheries management, policy and research. Fisheries 36:123-129
Chomyshyn, L., S.H. McConnachie and S.J. Cooke. 2011. Evaluation of water entry into the coelom and different levels of aseptic technique during surgical implantation of electronic tags in freshwater fish. Reviews in Fish Biology and Fisheries 21:61-70
Thiem, J.D., M.K. Taylor, S.H. McConnachie, T.R. Binder and S.J. Cooke. 2011. Trends in the reporting of tagging procedures for fish telemetry studies that have used surgical implantation of transmitters: a call for more complete reporting. Reviews in Fish Biology and Fisheries 21:117-126
Brown, R.S., M.B. Eppard, K.J. Murchie, J.L. Nielsen, and S.J. Cooke. 2011. An introduction to the practical and ethical perspectives on the need to advance and standardize the intracoelomic surgical implantation of electronic tags in fish. Reviews in Fish Biology and Fisheries 21:1-9
Cooke, S.J., G.N. Wagner, R.S. Brown and K.A. Deters. 2011. Training considerations for the intracoelomic implantation of electronic tags in fish with a summary of common surgical errors. Reviews in Fish Biology and Fisheries 21:11-24
Cooke, S.J., C. Woodley, M.B. Eppard, R.S. Brown and J.L. Nielsen. 2011. Advancing the surgical implantation of electronic tags in fish: a gap analysis and research agenda based on a review of trends in intracoelomic tagging effects studies. Reviews in Fish Biology and Fisheries 21:127-151
Wagner, G.N., S.J. Cooke, R.S. Brown and K.A. Deters. 2011. Surgical implantation techniques for electronic tags in fish. Reviews in Fish Biology and Fisheries 21:71-81
Butcher, P.A., M.K. Broadhurst, K.C. Hall and S.J. Cooke. 2011. Post-release survival and physiology of angled luderick (Girella tricuspidata) after confinement in keeper nets in an Australian estuary. ICES Journal of Marine Science 68:572-579
Donaldson, M.R., S.G. Hinch, D.A. Patterson, J. Hills, J.O. Thomas, S.J. Cooke, G.D. Raby, L.A. Thompson, D. Robichaud, K.K. English, and A.P. Farrell. 2011. The consequences of angling and beach seine capture on the physiology, post-release behaviour and survival of adult sockeye salmon during upriver migration. Fisheries Research 108:133-141
Miller, K.M., S. Li, K.H. Kaukinen, N. Ginther, E. Hammill, J.M.R. Curtis, D.A. Patterson, T. Sierocinski, L. Donnison, P. Pavlidis, S.G. Hinch, K.A. Hruska, S.J. Cooke, K.K. English, and A.P. Farrell. 2011. Genomic signatures predict migration and spawning failure in wild Canadian salmon. Science 331:214-217
O’Connor, C.M., C.Y. Yick, K.M. Gilmour, G. Van Der Kraak, and S.J. Cooke. 2011. The glucocorticoid stress response is attenuated but unrelated to reproductive investment during parental care in a teleost fish. General and Comparative Endrocrinology 170:215-221
Murchie, K.J., S.J. Cooke, A.J. Danylchuk, S.E. Danylchuk, T.L. Goldberg, C.D. Suski, and D.P. Philipp. 2011 Thermal biology of bonefish (Albula vulpes) in Bahamian coastal waters and tidal creeks: an integrated laboratory and field study. Journal of Thermal Biology 36:38-48
La, V.T., and S.J. Cooke. 2011. Advancing the science and practice of fish kill investigations. Reviews in Fisheries Science 19:21-33
Martins, E.G., S.G. Hinch, D.A. Patterson, M.J. Hague, S.J. Cooke, K.M. Miller, M.F. Lapointe, K.K. English, and A.P. Farrell. 2011. Effects of river temperature and climate warming on stock-specific survival of adult migrating Fraser River sockeye salmon (Oncorhynchus nerka). Global Change Biology 17:99-114
Murchie, K.J., S.J. Cooke, A.J. Danylchuk, and C.D. Suski. 2011. Estimates of field activity and metabolic rates of bonefish (Albula vulpes) in coastal marine habitats using acoustic tri-axial accelerometer transmitters and intermittent-flow respirometry. Journal of Experimental Marine Biology and Ecology 396:147-155
Roscoe, D.W., S.G. Hinch, S.J. Cooke, and D.A. Patterson. 2011. Fishway passage and post-passage of up-river migrating sockeye salmon in the Seton River, British Columbia. River Research and Applications 27:693-705
2010
Cowx, I.G., R. Arlinghaus, and S.J. Cooke. 2010. Harmonising recreational fisheries and conservation objectives for aquatic biodiversity in inland waters. Journal of Fish Biology 76:2194-2215
Walker, R.P., A. O’Toole, Z. Whynot, K. C. Hanson, and S.J. Cooke. 2010. Evaluation of the aquatic habitat and fish assemblage in an urban reach of the historic Rideau Canal, Ottawa, Canada: implications for management in an engineered system. Urban Ecosystems 13:563-582
O’Toole, A.C., K.J. Murchie, C. Pullen, K.C. Hanson, C.D. Suski, A.J. Danylchuk, and S.J. Cooke. 2010. Locomotory activity and depth distribution of adult great barracuda (Sphyraena barracuda) in Bahamian coastal habitats determined using acceleration and pressure biotelemetry transmitters. Marine and Freshwater Research 61:1446-1456
Redpath, T.D., S.J. Cooke, C.D. Suski, R. Arlinghaus, P. Couture, D.H. Wahl, and D.P. Philipp. 2010. The metabolic and biochemical basis of vulnerability to recreational angling after three generations of angling-induced selection in a teleost fish. Canadian Journal of Fisheries and Aquatic Sciences 67:1983-1992
O’Connor, C.M., K.M. Gilmour, R. Arlinghaus, C.T. Hasler, D.P. Philipp, and S.J. Cooke. 2010. Seasonal carryover effects following the administration of cortisol to a wild teleost fish. Physiological and Biochemical Zoology 83:950-957
Donaldson, M.R., T.D. Clark, S.G. Hinch, S.J. Cooke, D.A. Patterson, M.K. Gale, P.B. Frappell, and A.P. Farrell. 2010. Physiological responses of free-swimming adult coho salmon to simulated predator and fisheries encounters. Physiological and Biochemical Zoology 83:973-983
O’Toole, A.C., A.J. Danylchuk, C.D. Suski, and S.J. Cooke. 2010. Consequences of catch-and-release angling on the physiological status, injury, and immediate mortality of great barracuda (Sphyraena barracuda) in The Bahamas. ICES Journal of Marine Science 67:1667-1675
Murchie, K.J., E. Schwager, S.J. Cooke, A.J. Danylchuk, S.E. Danylchuk, T.L. Goldberg, C.D. Suski, and D.P. Philipp. 2010. Spatial ecology of juvenile lemon sharks (Negaprion brevirostris) in tidal creeks and coastal waters of Eleuthera, The Bahamas. Environmental Biology of Fishes 89:95-104
Dey, C.J., C.M. O’Connor, K.M. Gilmour, G. Van Der Kraak and S.J. Cooke. 2010. Behavioral and physiological responses of a wild teleost fish to cortisol and androgen manipulation during parental care. Hormones and Behaviour 58:599-605
Murchie, K.J, S.J. Cooke, and A.J. Danylchuk. 2010. Seasonal energetics and condition of bonefish from different subtropical tidal creeks in Eleuthera, The Bahamas. Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science 2:249-262
Gillis, N.C., T. Rapp, C.T. Hasler, H. Wachelka, and S.J. Cooke. 2010. Spatial ecology of adult muskellunge (Esox masquinongy) in the urban Ottawa reach of the historic Rideau Canal, Canada. Aquatic Living Resources 23:225-230
Cooke, S.J., J.F. Schreer, D.H. Wahl, and D.P. Philipp. 2010. Cardiovascular performance of six species of field-acclimatized centrarchid sunfish during the parental care period. Journal of Experimental Biology 213:2332-2342
Cooke, S.J., A.J. Danylchuk, M.J. Kaiser, and M. Rudd. 2010. Is there a need for a “100 questions exercise” to enhance fisheries and aquatic conservation, policy, management, and research? Lessons from a global 100 questions exercise on conservation of biodiversity. Journal of Fish Biology 76:2261-2286
Cooke, S.J., and C.M. O’Connor. 2010. Making conservation physiology relevant to policy makers and conservation practitioners. Conservation Letters 3:159-166
Cooperman, M.S., S.G. Hinch, G.T. Crossin, S.J. Cooke, D.A. Patterson, I. Olsson, A. Lotto, D. Welch, J.M. Shrimpton, G. Van Der Kraak, and A.P. Farrell. 2010. Effects of experimental manipulations of salinity and maturation status on the physiological condition and mortality of homing adult sockeye salmon held in a laboratory. Physiological and Biochemical Zoology 83:459-472
Donaldson, M.R., Hruska, K.A., Hinch, S.G., Patterson, D.A., Farrell, A.P., Shrimpton, J.M., Miller-Saunders, K.M., Robichaud, D., Hanson, K.C., English, K.K., and Cooke, S.J. 2010. Physiological condition differentially affects the behaviour and survival of two populations of sockeye salmon during their freshwater spawning migration. Physiological and Biochemical Zoology 83:446-458
Roscoe, D.W., S.G. Hinch, S.J. Cooke, and D.A. Patterson. 2010. Do levels of reproductive hormones and gross somatic energy influence thermoregulatory and migration behaviour of adult sockeye salmon migrating through stratified lakes? Ecology of Freshwater Fish 19:51-62
Arlinghaus, R., S.J. Cooke, and I.G. Cowx. 2010. Providing context to the global code of practice for recreational fisheries. Fisheries Management and Ecology 17:146-156
Hanson, K.C., C.T. Hasler, M.R. Donaldson, and S.J. Cooke. 2010. Stability of swimming performance and activity hierarchies among wild largemouth bass (Micropterus salmoides) at multiple temporal scales: evidence for context-dependent shuffling between seasons. Canadian Journal of Zoology 88:324-333
Donaldson, M.R., C.T. Hasler, K.C. Hanson, T.D. Clark, S.G. Hinch, and S.J. Cooke. 2010. Injecting youth into peer-review to increase its sustainability: a case study of ecology journals. Ideas in Ecology and Evolution 3:1-7
Gravel M.-A., P. Couture and S.J. Cooke. 2010. Comparative energetics and physiology of parental care in smallmouth bass (Micropterus dolomieu) across a latitudinal gradient. Journal of Fish Biology 76:280-300
Crossin, G.T., S.G. Hinch, S.J. Cooke, D.A. Patterson, A.G. Lotto, G. Van Der Kraak, Y. Zohar, U. Klenke, and A.P. Farrell. 2010. Testing the synergistic effects of GnRH and testosterone on the reproductive physiology of pre-adult pink salmon Oncorhynchus gorbuscha. Journal of Fish Biology 76:112-128
Brown, R.S., S.J. Cooke, G.N. Wagner, and M.B. Eppard. 2010. Methods for surgical implantation of acoustic transmitters in juvenile salmonids: a review of literature and guidelines for techniques. U.S. Army Corps of Engineers
Mathes, M.T., S.G. Hinch, S.J. Cooke, G.T. Crossin, D.A. Patterson, A.G. Lotto, and A.P. Farrell. 2010. Effect of water temperature, timing, physiological condition and lake thermal refugia on migrating adult Weaver Creek sockeye salmon (Oncorhynchus nerka). Canadian Journal of Fisheries and Aquatic Sciences 67:70-84
Gravel, M.-A., P. Couture, and S.J. Cooke. 2010. Brood predation pressure during parental care does not influence parental enzyme activities related to swimming activity in a teleost fish. Comparative Biochemistry and Physiology A 155:100-106
2009
Crossin, G.T., S.G. Hinch, D.W. Welch, S.J. Cooke, D.A. Patterson, J.A. Hills, Y. Zohar, U. Klenke, M.C. Jacobs, L.B. Pons, P.M. Winchell, and A.P. Farrell. 2009. Physiological profiles of sockeye salmon in the Northeastern Pacific Ocean and the effects of exogenous GnRH and testosterone on rates of homeward migration. Marine and Freshwater Behaviour and Physiology 42-89-108
Arlinghaus, R., A. Schwab, S.J. Cooke and I.G. Cowx. 2009. Contrasting pragmatic and suffering- centred approaches to fish welfare in recreational angling. Journal of Fish Biology 75:2448-2463
Hinch, S.G., A.P. Farrell, S.J. Cooke, D.A. Patterson, M.F. Lapointe, D.W. Welch, K.K. English, G.T. Crossin, K. Miller, R.E. Thomson, G. Van Der Kraak, I. Olssen, M. Shrimpton, and M.S. Cooperman. 2009. Using physiological telemetry and intervention experiments to examine the maladaptive shift in Fraser River’s Late-Run Sockeye Salmon spawning migration. American Fisheries Society Symposium 69:891-894.
Colotelo, A.H., S.J. Cooke, and K.E. Smokorowski. 2009. Application of forensic techniques to enhance fish conservation and management: Injury detection using presumptive tests for blood. Endangered Species Research 9:169-178