Cooke, S.J., J.R. Bennett and H.P. Jones. In Press. We have a long way to go if we want to realize the promise of the “Decade on Ecosystem Restoration”. Conservation Science & Practice. 00:000-000.
Benson C, Shea B, de Silva C, Donovan D, Holder P, Cooke SJ, and Gallagher AJ. (In Press) Physiological consequences of varying shark exposure on a large teleost species. Canadian Journal of Zoology 00:00-000.
Brownscombe JW, LP Griffin, JM Chapman, D Morley, A Acosta, GT Crossin, SJ Iverson, AJ Adams, SJ Cooke, AJ Danylchuk. In Press. A practical method to account for variation in detection range in acoustic telemetry arrays to accurately quantify the spatial ecology of aquatic animals. Methods in Ecology and Evolution. 00:000-000.
Hayden, T.A., Vandergoot, C., Fielder, D.G., Cooke, S.J., Dettmers, J.M., Krueger, C.C. In press. Telemetry reveals limited exchange of walleye between Lake Erie and Lake Huron: movement of two populations through the Huron-Erie corridor. Journal of Great Lakes Research. 00:000-000.
Reid, A. J., A. K. Carlson, D. E. L. Hanna, J. D. Olden, S. J. Ormerod, S. J. Cooke. In Press. Conservation challenges to freshwater ecosystems. Chapter X in S. A. Elias, editor. Encyclopedia of the World’s Biomes, Reference Module in Earth and Environmental Sciences. Elsevier.
Bergman, J.N., Bennett, J.R., Binley, A.D., Cooke, S.J., Vincent, F., Hlina, B.L., Reid, C.H., Vala, M.A., Madliger, C.L. (2019). Scaling from individual physiological measures to population-level demographic change: case studies and future directions for conservation management. Biological Conservation. 00:000-000.
Lynch, A.J., D.M. Bartley, T.D. Beard, Jr., I.G. Cowx, S. Funge-Smith, W.W. Taylor and S.J. Cooke. In Press. Examining progress toward achieving the Ten Steps of the Rome Declaration on Responsible Inland Fisheries. Fish and Fisheries. 00:000-000.
Pleizier, N.K., C. Nelson, S.J. Cooke and C.J. Brauner. In Press. Understanding gas bubble trauma in an era of hydropower expansion: How do fish compensate at depth? Canadian Journal of Fisheries and Aquatic Sciences. 00:000-000.
Roche, D.G., J.R. Bennett, J. Provencher, T. Rytwinski, N.R. Haddaway and S.J. Cooke. In Press. Environmental sciences benefit from robust evidence irrespective of speed. Science of the Total Environment. 00:000-000.
Bao, J., W. Li, C. Zhang, X. Mi, H. Li, X. Zhao, N. Cao, W.M. Twardek, S.J. Cooke and M. Duan. In Press. Quantitative assessment of fish passage efficiency at a vertical-slot fishway on the Daduhe River in Southwest China. Ecological Engineering. 00:000-000.
Flecker, A.S., C.W. Twining, O.J. Schmitz, S.J. Cooke and N. Hammerschlag. In Press. Aquatic predators influence micronutrients: Important but understudied. Trends in Ecology and Evolution. 00:000-000.
Ford, M.I., Elvidge, C.K., Patrick, P.H., Sills, M. and Cooke, S.J. In Press. Coloured LED light as a potential behavioural guidance tool for age-0 and age-2 walleye Sander vitreus. Journal of Fish Biology. 00:000-000.
Gutowsky LFG, Romine JG, Heredia NA, Bigelow PE, Parsley MJ, Sandstrom PT, Suski CD, Danylchuk AJ, Cooke SJ, Gresswell RE. In Press. Revealing migration and reproductive habitat of invasive fish under an active population suppression program. Conservation Science and Practice. 00:000-000.
Parsapour-Moghaddam, P., C.P. Brennan, C.D. Rennie, C.K. Elvidge and S.J. Cooke. In Press. Impacts of channel morphodynamics on fish habitat utilization. Environmental Management. 00:000-000.
Jeanson, A.L., P. Soroye, A.N. Kadykalo, T.D. Ward, E. Paquette, A.E.I. Abrams, D.A. Algera, D. Demers, L.J. Epp, M.P. Giles, M.A. Litt, B.A. Manouchehri, R.J. James, S. McBeth, A. Paradis, L. Pittet, J. Sebes, S.C. Steell, A. Thompson, P. Tremblay, E.I. Tuononen, J.T. Kerr, J.R. Bennett and S.J. Cooke. In Press. Twenty actions for a ‘Good Anthropocene’ – Perspectives from early career conservation professionals. Environmental Reviews. 00:000-000.
Cooke, S.J., M.J. Lawrence, G.D. Raby, A.K. Teffer, K.M. Jeffries, A.J. Danylchuk and T.D. Clark. In Press. Comment on Duman et al. 2019 – Practices for drawing blood samples from Teleost fish. North American Journal of Aquaculture. North American Journal of Aquaculture. 00:000-000.
Reid, C.H., C.S. Vandergoot, J.D. Midwood, E.D. Stevens, J. Bowker and S.J. Cooke. In Press. On the electroimmobilization of fishes for research and practice: opportunities, challenges, and research needs. Fisheries. 00:000-000.
Hasler CT, Raby G, Chretien E, Stockwell M, Cooke SJ, Rechisky E, Welch D, Sopinka N, and N Mandrak. In Press. Reflections on the legends of Canadian fisheries science and management. Fisheries 00:000–000.
French R.P., J.M. Lyle, W.M. Twardek, S.J. Cooke and J.M. Semmens. In Press. A characterization of Australian Shortfin Mako Shark anglers. Marine Policy. 00:000-000.
Nguyen, V.M., Young, N., Brownscombe, J.W., Cooke, S.J. In Press. Science-based action starts with collaboration and engagement: factors influencing knowledge uptake in fish telemetry. Ecological Applications. 00:000-000.
Lennox, R.J., J.M. Chapman, W.M. Twardek, F. Broell, K. Bøe, F.G. Whoriskey, I.A. Fleming, M. Robertson and S.J. Cooke. In Press. Biologging in combination with biotelemetry reveals behavior of Atlantic salmon following exposure to capture and handling stressors. Canadian Journal of Fisheries and Aquatic Sciences. 00:000-000.
Lennox RJ, Brownscombe JW, Elvidge CK, Harrison P, Peiman K, Raby GD, Cooke SJ. In Press. Behaviour including fish migration. Chapter 7 in Woo P, Iwama GK (eds), Non Infectious Fish Disorders. CABI Publishing Group, pp 000-000.
Lennox RJ, Paukert P, Aarestrup K, Auger-Méthé M, Baumgartner LJ, Birnie-Gauvin K, Bøe K, Brink K, Brownscombe JW, Chen Y, Davidsen JG, Eliason EJ, Filous A, Gillanders BM, Helland IP, Horodysky AZ, Januchowski-Hartley SR, Lowerre-Barbieri SK, Lucas MC, Martins ES, Murchie KJ, Pompeu P, Power M, Raghavan R, Rahel FJ, Secor DH, Thiem JD, Thorstad EB, Ueda H, Whoriskey FG, Cooke SJ. 2019. 100 pressing questions on the future of global fish migration science, conservation, and policy. Frontiers in Ecology and Evolution. 7:286. doi: 10.3389/fevo.2019.00286
Teffer, A.K., Hinch, S.G., Miller, K.M., Jeffries, K.M., Patterson, D.A., Cooke, S.J., Farrell, A.P., Kaukinen, K.H., Li, S. and F. Juanes. 2019. Cumulative effects of thermal and fisheries stressors reveal sex-specific effects on pathogen development and early mortality of adult coho salmon (Oncorhynchus kisutch). Physiological and Biochemical Zoology. 92(5):505-529.
Harcourt, R., A.M. Sequeira, X. Zhang, F. Roquet, K. Komatsu, M. Heupel, C.R. McMahon, F.G. Whoriskey, M. Meekan, G. Carroll, S. Brodie, C. Simpfendorfer, M.A. Hindell, I.D. Jonsen, D.P. Costa, B.A. Block, M.M. Muelbert, B.E. Woodward, M.J. Weises, K. Aarestrup, M. Biuw, L. Boehme, S.J. Bograd, D. Cazau, J-B. Charrassin, S.J. Cooke, P.D. Cowley, P.J.N. De Bruyn, T. Jeanniard Du Dot, C.M. Duarte, V.M. Eguíluz, L. Ferreira, J. Fernández-Gracia, K. Goetz, Y. Goto, C. Guinet, M. Hammill, G.C. Hays, E. Hazen, L. Huckstadt, C. Huveneers, S. Iverson, S.A. Jaaman, K. Kittiwattanawong, K. Kovacs, C. Lydersen, T. Moltmann, M. Naruoka, B. Picard, N. Queiroz, G. Reverdin, K. Sato, D.W. Sims, E.B. Thorstad, M. Thums, A.M. Treasure, A. Trites, G.D. Williams, Y. Yonehara and M. Fedak. 2019. Animal-Borne Telemetry: an integral component of the ocean observing toolkit. Frontiers in Marine Science. 6:326 doi: 10.3389/fmars.2019.00326.
Kelly, R., M. Mackay, K.L. Nash, C. Cvitanovic, E.H. Allison, D. Armitage, A. Bonn, S.J. Cooke, S. Frusher, E.A. Fulton, B.S. Halpern, P.F.M. Lopes, E.J. Milner-Gulland, M.A. Peck, G.T. Pecl, R.L. Stephenson and F. Werner. 2019. Ten tips for developing the next generation of interdisciplinary socio-ecological researchers. Socio-Ecological Practice Research. 1:149-161.
Pinder, A.C., J.R. Britton, A.J. Harrison, P. Nautiyal, S.D. Bower, S.J Cooke, S. Lockett, M. Everard, U. Katwate, K. Ranjeet, S.Walton, A.J Danylchuk, N. Dahanukar, and R. Raghavan. 2019. Mahseer (Tor spp.) fishes of the world: status, challenges and opportunities for conservation. Reviews in Fish Biology and Fisheries. 29:417-452.
Twardek, W.M., Chapman, J.M., Miller, K.M., Beere, M.C., Li, S., Kaukinen, K.H., Danylchuk, A.J., Cooke, S.J. In Press. Evidence of a hydraulically challenging reach serving as a barrier for the upstream migration of infection-burdened adult steelhead. Conservation Physiology. 7(1): coz023;doi:10.1093/conphys/coz023.
Davidsen, J. G., Dong, H., Linné, M., Andersson, M. H., Piper, A., Prystay, T. S., Hvam, E. B., Thorstad, E. B., Whoriskey, F., Cooke, S. J., Sjursen, A. D., Rønning, L., Netland, T. C. & Hawkins, A. D. 2019. Effects of sound exposure from a seismic airgun on heart rate, acceleration and swimming depth in Atlantic cod and saithe. Conservation Physiology. 7(1): coz020; doi:10.1093/conphys/coz020.
Brownscombe JW, E Ledee, GD Raby, DP Struthers, LFG Gutowsky, VM Nguyen, N Young, MJW Stokesbury, CM Holbrook, TO Brenden, CS Vandergoot, KJ Murchie, K Whoriskey, J Mills-Flemming, S. Kessel, CC Krueger, and SJ Cooke. 2019. Conducting and interpreting fish telemetry studies: Considerations for researchers and resource managers. Reviews in Fish Biology and Fisheries 29:369-400.
Cooke, S.J., W.M. Twardek, A.J. Reid, R.J. Lennox, S. C. Danylchuk, J.W. Brownscombe, S.D. Bower, R. Arlinghaus, K. Hyder and A.J. Danylchuk. 2019. Searching for responsible and sustainable recreational fisheries in the Anthropocene. Journal of Fish Biology. 94:845-856. (Essay arising from the 2018 FSBI Jack Jones Memorial Lecture)
Rytwinski, T., Elmer, L.K., Taylor, J.J., Donaldson, L.A., Bennett, J.R., Smokorowski, K.E., Winegardner, A.K., and Cooke, S.J. 2019. How effective are spawning-habitat creation or enhancement measures for substrate-spawning fish? A synthesis. Can. Tech. Rep. Fish. Aquat. Sci. 3333: viii + 183 p.
Brooks, J.L., J.M. Chapman, A.N. Barkley, S.T. Kessel, N.E. Hussey, S.G. Hinch, D.A. Patterson, K.J. Hedges, S.J. Cooke, A.T. Fisk, S.H. Gruber and V.M. Nguyen. 2019. Biotelemetry informing management: case studies exploring successful integration of biotelemetry data into fisheries and habitat management. Canadian Journal of Fisheries and Aquatic Sciences. 76: 1238-1252.
Walton-Rabideau, S.E., M. Newell, A.L. Jeanson, E.J.I. Lédée, J.M. Farrell, and S.J. Cooke. 2019. Evaluation of tag retention, healing, growth and behavior in age-0 Muskellunge Esox masquinongy following acoustic transmitter implantation. North American Journal of Fisheries Management. 39:652-663.
Lawrence, M. J., Eliason, E. J., Zolderdo, A. J., Lapointe, D., Best, C., Gilmour, K. M., & Cooke, S. J. (2019). Cortisol modulates metabolism and energy mobilization in wild-caught pumpkinseed (Lepomis gibbosus). Fish physiology and biochemistry, 1-16.
Whoriskey K., Martins E.G., Auger-Méthé M., Gutowsky L.F.G., Lennox R.J., Cooke S.J., Power M., Mills Flemming J. 2019. Current and emerging statistical techniques for aquatic telemetry data: A guide to analyzing spatially discrete animal detections. Methods in Ecology and Evolution 1-14.
Prystay, T. S., Lawrence, M. J., Zolderdo, A. J., Brownscombe, J. W., de Bruijn, R., Eliason, E. J., and Cooke, S. J. 2019. Exploring relationships between cardiovascular activity and parental care behavior in nesting smallmouth bass: a field study using heart rate biologgers. Comparative Biochemistry and Physiology A. 234:18-27.
Donaldson, L.A., T. Rytwinski, J.J. Taylor, D.A.R. Drake, A. Martel, S.J. Cooke. 2019. Can conservation targets for imperiled freshwater fishes and mussels be achieved by captive breeding and release programs? A systematic map protocol to determine available evidence. Environmental Evidence. 8:16.
Harrison, P.M., Martins, E.G., Algera, D.A., Rytwinski,T., Mossop, B, Leake, A.J., Power, M., and Cooke, S.J. 2019. Turbine entrainment and passage of potadromous fish through hydropower dams: developing conceptual frameworks and metrics for moving beyond turbine passage mortality. Fish and Fisheries. 1-16.
Taylor, J.J. , Rytwinski, T., Bennett, J.R., Smokorowski, K.E., Lapointe, N.W.R., Janusz, R., Clarke, K., Tonn, B., Walsh, J.C., Cooke, S.J. 2019. The effectiveness of spawning habitat creation or enhancement for substrate-spawning temperate fish: a systematic review. Environmental Evidence. 8:19.
Arlinghaus, R., J.K. Abbott, E.P. Fenichel, S.R. Carpenter, L.M. Hunt, J. Alós, T. Klefoth, S.J. Cooke, R. Hilborn, O.P. Jensen, M.J. Wilberg, J.R. Post, and M.J. Manfredo. In Press. Governing the recreational dimension of global fisheries. Proceedings of the National Academy of Sciences. 116(12):5209-5213.
Haddaway, N.R., S.J. Cooke, P. Lesser, B. Macura, A.E. Nilsson, J.J. Taylor and K. Raito. 2019. Evidence of the impacts of metal mining and the effectiveness of mining mitigation measures on social–ecological systems in Arctic and boreal regions: a systematic map protocol. Environmental Evidence. 8:9.
McLean, M. F., Litvak, M. K., Cooke, S. J., Hanson, K. C., Patterson, D. A., Hinch, S. G., & Crossin, G. T. 2019. Immediate physiological and behavioural response from catch-and-release of wild white sturgeon (Acipenser transmontanus Richardson, 1836). Fisheries Research. 214:65-75.
Halsey LG, Green JA, Twiss SD, Arnold W, Butler PJ, Cooke SJ, Grémillet D, Ruf T, Hicks O, Minta KJ, Prystay TS, Wascher CAF & V Careau. 2019. Flexibility, variability and constraint in energy management patterns across vertebrate taxa revealed by long-term heart rate measurements. Functional Ecology. 33:260-272.
Brownscombe JW, AJ Danylchuk, AJ Adams, B Black, R Boucek, M Power, JS Rehage, RO Santos, RW Fisher, B Horn, CR Haak, S Morton, J Hunt, R Ahrens, MS Allen, J Shenker, SJ Cooke. 2019. Bonefish in South Florida: status, threats and research needs. Environmental Biology of Fishes. 102:329-348.
Bower, S.D., Song, A.M., Onyango, P., Cooke, S.J., Kolding, J. 2019. Using transdisciplinary research to support governance in inland fisheries. MARE Publication Series, Vol. 21, Chuenpagdee, R and Jentoft, S. (Eds): Transdisciplinarity for Small-Scale Fisheries Governance, 978-3-319-94937-6, 466764_1_En.
Drenner, S.M., S. G. Hinch, N. B. Furey, T. D. Clark, S. Li, T. Ming, K. M. Jeffries, D. A. Patterson, S. J. Cooke, D. Robichaud, D. W. Welch, A P. Farrell, and K.M. Miller. 2018. Transcriptome patterns and blood physiology associated with homing success of sockeye salmon during their final stage of marine migration. Canadian Journal of Fisheries and Aquatic Sciences. 75:1511-1524.
Madenjian, C.P., T.A. Hayden, T.B. Peat, C.S. Vandergoot, D.G. Fielder, A-M. Gorman, S.A. Pothoven, J.M. Dettmers, S.J. Cooke, Y. Zhao and C.C. Krueger. 2018. Temperature regimes, growth, and food consumption for female and male adult walleye in Lake Huron and Lake Erie: a bioenergetics analysis. Canadian Journal of Fisheries and Aquatic Sciences. 75:1573-1586.
Reid, A.J., A.K. Carlson, I.F. Creed, E.J. Eliason, P.A. Gell, P.T.J. Johnson, K.A. Kidd, T.J. MacCormack, J.D. Olden, S.J. Ormerod, J.P. Smol, W.W. Taylor, K. Tockner, J.C. Vermaire, D. Dudgeon and S.J. Cooke. 2018. Emerging threats and persistent conservation challenges for freshwater biodiversity. Biological Reviews. DOI 10.1111/brv.12480.
Struthers, D.P., Bower, S.D., Lennox, R.J., Gilroy, C., MacDonald, B., Cooke, S.J., and Litvak, M.K. 2018. Short-term physiological disruption and reflex impairment in Shortnose Sturgeon Acipenser brevirostrum exposed to catch-and-release angling. North American Journal of Fisheries Management. 38:1075-1084.
Lapointe D, Cooperman MS, Chapman LJ, Clark TD, Val AL, Ferreira MS, Balirwa J, Mbabazi D, Mwanja M, Chhom L, Hannah L, Kaufman L, Farrell AP, Cooke SJ. 2018. Predicted impacts of climate warming on aerobic performance and upper thermal tolerance of six tropical freshwater fishes spanning three continents. Conservation Physiology 6: doi: 10.1093/conphys/coy056.
Jain-Schlaepfer, S.M.R., J.D. Midwood, M.H. Larsen, K. Aarestrup, G.D. King, C.D. Suski and S.J. Cooke. 2018. Relationship of baseline and maximum glucocorticoid concentrations to migration propensity – a field test with wild sub-adult brown trout (Salmo trutta). Canadian Journal of Zoology. 96:1346-1352.
Krueger, C.C., C.M. Holbrook, T.R. Binder, C.S. Vandergoot, T.A. Hayden, D.W. Hondorp, N. Nate, K. Paige, S.C. Riley, A.T. Fisk and S.J. Cooke. 2018. Acoustic Telemetry Observation Systems: challenges encountered and overcome in the Laurentian Great Lakes. Canadian Journal of Fisheries and Aquatic Sciences. 75:1755-1763.
Browman, H.I., S.J. Cooke, I.G. Cowx, S.W.G. Derbyshire, A. Kasumyan, B. Key, J.D. Rose, A. Schwab, A. Berit Skiftesvik, E.D. Stevens, C.A. Watson and R. Arlinghaus. 2018. Welfare of aquatic animals: Where things are, where they are going, and what it means for research, aquaculture, recreational angling, and commercial fishing. ICES Journal of Marine Science. DOI 10.1093/icesjms/fsyo67.
Eales, J., N.R. Haddaway, C. Bernes, S.J. Cooke, B. Gunnar Jonsson, J. Kouki, G. Petrokofsky and J.J. Taylor. 2018. What is the effect of prescribed burning in temperate and boreal forest on biodiversity, beyond tree regeneration, pyrophilous and saproxylic species? A systematic review. Environmental Evidence. 7:19. DOI 10.1186/s13750-018-0131-5.
Cook, K. V., Hinch, S. G., Watson, M. S., Patterson, D. A., Reid, A. J., & Cooke, S. J. 2018. Experimental capture and handling of chum salmon reveal thresholds in injury, impairment, and physiology: Best practices to improve bycatch survival in a purse seine fishery. Fisheries Research. 206: 96-108.
Griffin, L.P., J.W. Brownscombe, A.J. Adams, R.E. Boucek, J.T. Finn, M.R. Heithaus, J.S. Rehage, S.J. Cooke and A.J. Danylchuk. 2018. Keeping up with the Silver King: Using cooperative acoustic telemetry networks to quantify the movements of Atlantic tarpon (Megalops atlanticus) in the coastal waters of the southeastern United States. Fisheries Research. 205:65-76.
Song, A.M., S.D. Bower, P. Onyango, S.J. Cooke, S. Akintola, J. Baer, T. Gurung, M. Hettiarachchi, M.M. Islam, W. Mhlanga, F. Nunan, P. Salmi, V. Singh, X. Tezzo, S. Funge-Smith, P. Nayak and R. Chuenpagdee. 2018. Inter-sectorality in the governance of inland fisheries. Ecology and Society 23 (2):17. [online] URL: https://www.ecologyandsociety.
Loury, E., S.M. Ainsley, S. Bower, R. Chuenpagdee, T. Farrell, A.G. Guthrie, S. Heng, Z. Lunn, A. Al Mamun, R. Oyanedel, S. Rocliffe, S. Satumanatpan and S.J. Cooke. 2018. Salty stories, fresh spaces: Lessons for aquatic protected areas from marine and freshwater experiences. Aquatic Conservation. 28:485–500.
Twardek, W.M., R.J. Lennox, M.J. Lawrence , J.M. Logan, P. Szekeres, K. Tremblay, G.E. Morgan, A.J. Danylchuk, and S.J. Cooke. 2018. The post-release survival of Walleye Sander vitreus following ice angling on Lake Nipissing, Ontario. North American Journal of Fisheries Management 38: 159-169.
Dick, M., E.J. Eliason, D.A. Patterson, K.A. Robinson, S.J. Cooke, S.G. Hinch. 2018. Short-term physiological response profiles of tagged migrating adult sockeye salmon: a comparison of gastric and external tagging methods. Transactions of the American Fisheries Society. 147:300-315.
Abrams, A. E. I., A. M. Rous, J. L. Brooks, M. J. Lawrence, S. E. Doka, J. D. Midwood, and S. J. Cooke. 2018. Comparing immobilization, recovery, and stress indicators associated with electric fish handling gloves and a portable electrosedation system. Transactions of the American Fisheries Society. 147:390-399.
Lawrence, M.J., E.J. Eliason, J.W. Brownscombe, K.M. Gilmour, J.W. Mandelman, L.F.G. Gutowsky and S.J. Cooke. 2018. Influence of supraphysiological cortisol manipulation on predator avoidance behaviours and physiological responses to a predation threat in a wild marine teleost fish. Integrative Zoology. 13:206-218.
Ford, M.I., C.K. Elvidge, D. Baker, T.C. Pratt, K.E. Smokorowski, M. Sills, P. Patrick and S.J. Cooke. 2018. Preferences of age-0 white sturgeon for different colours and strobe rates of LED lights may inform behavioural guidance strategies. Environmental Biology of Fishes. 101:667-674.
Raby, G.D., C.S. Vandergoot, T.A. Hayden, M.D. Faust, R.T. Kraus, J.M. Dettmers, S.J. Cooke, Y. Zhao, A.T. Fisk and C.C. Krueger. 2018. Does behavioural thermoregulation underlie seasonal movements in Lake Erie walleye? Canadian Journal of Fisheries and Aquatic Sciences. 75:488-496.
Silva, A.T., M.C. Lucas, T. Castro-Santos, C. Katopodis, L.J. Baumgartner, J.D. Thiem, K. Aarestrup, P.S. Pompeu, G.C. O’Brien, D. Braun, N.J. Burnett, D.Z. Zhu, H-P. Fjeldstad, T. Forseth, N. Rajaratnam, J.G. Williams and S.J. Cooke. 2018. The future of fish passage science, engineering, and practice. Fish and Fisheries. 19(2):340-362.
Hayden, T.A., T.R. Binder, C.M. Holbrook, C.S. Vandergoot, D.G. Fielder, S.J. Cooke, J.M. Dettmers and C.C. Krueger. 2018. Spawning site fidelity and apparent annual survival of walleye (Sander vitreus) differs between a Lake Huron and Lake Erie tributary. Ecology of Freshwater Fish. 27: 339-349.
Gallagher, A.J., P. Szekeres, S.J. Cooke, and J.M. Farrell. 2017. Tracking young-of-year northern pike and muskellunge: monitoring behavior and habitat use during fall outmigration from nursery sites. American Fisheries Society Symposium 00:000-000.
Brooks, J.L., C. Boston, S. Doka, D. Gorsky, K. Gustavson, D. Hondorp, D. Isermann, J. D. Midwood, T.C. Pratt, A. M. Rous, J. L. Withers, C.C. Krueger, & S. J. Cooke. 2017. Use of fish telemetry in rehabilitation planning, management, and monitoring in Areas of Concern in the Laurentian Great Lakes. Environmental Management. 60(6):1139–1154.
Struthers, D.P., L.F.G. Gutowsky, E.C. Enders, K.E. Smokorowski, D.A. Watkinson, A.T. Silva, M. Cvetkovic, E. Bibeau and S.J. Cooke. 2017. Factors influencing the spatial ecology of Lake Sturgeon and Walleye within an impounded reach of the Winnipeg River. Environmental Biology of Fishes. 100:1085–1103.
Diggles, B.K., Arlinghaus, R., Browman, H. I., Cooke, S. J., Cowx, I. G., Kasumyan, A. O., Key, B., Rose, J. D., Sawynok, W., Schwab, A., Skiftesvik, A. B., Stevens, E. D., Watson, C. A. and Wynne, C. D. L. 2017. Responses of larval zebrafish to low pH immersion assay generate multiple interpretations, questions and problems. Comment on Lopez-Luna et al. (2017). Journal of Experimental Biology. 220:3191-3192.
Brownscombe, J.W., S.J. Cooke, D.A. Algera, K.C. Hanson, E.J. Eliason, N.J. Burnett, A.J. Danylchuk, S.G. Hinch, and A.P. Farrell. 2017. Ecology of exercise in wild fish: integrating concepts of individual physiological capacity, behaviour and fitness through diverse case studies. Integrative and Comparative Biology. 57:281-292.
Reid, A.J., J.L. Brooks, L. Dolgova, B. Laurich, B.G. Sullivan, P. Szekeres, S.L.R. Wood, J.R. Bennett and S.J. Cooke, S.J. 2017. Post-2015 Sustainable Development Goals still neglecting their environmental roots in the Anthropocene. Environmental Science and Policy. 77:179-184.
Redfern, J.C., S.J. Cooke, R.J. Lennox, M.A. Nannini, D.H. Wahl and Kathleen M. Gilmour. 2017. Effects of maternal cortisol treatment on offspring size, responses to stress, and anxiety related behavior in wild largemouth bass (Micropterus salmoides). Physiology and Behavior. 180(15):15-24.
Lennox RJ, Aarestrup K, Cooke SJ, Cowley PD, Deng ZD, Fisk AT, Harcourt RG, Heupel M, Hinch SG, Holland KN, Hussey NE, Iverson SJ, Kessel ST, Kocik JF, Lucas MC, Mills Flemming J, Nguyen VM, Stokesbury MJW, Vagle S, VanderZwaag DL, Whoriskey FG, Young N. 2017. Envisioning the future of aquatic animal tracking: Technology, science, and application. BioScience. 67(10):884-896.
Cooke, S.J., K. Birnie-Gauvin, R.J. Lennox, J.J. Taylor, T. Rytwinski, J.L. Rummer, C.E. Franklin, J.R. Bennett and N.R. Haddaway. 2017. How experimental biology and ecology can support evidence-based decision-making in conservation: Avoiding pitfalls and enabling application. Conservation Physiology 5(1):cox043
Harrison, P.M., Gutowsky, L.F.G, Martins, E.G., Patterson, D.A., Cooke, S.J., and Power, M. 2017. Partial diel migration: a facultative migration underpinned by long-term inter-individual variation. Journal of Animal Ecology. 86: 246-125.
Lawrence, M.J., A.J. Zolderdo and S.J. Cooke. 2017. The consequences of war on the natural environment. Pages 48-62 in W.H. Wiist and S.K. White, Eds. Preventing War and Promoting Peace: A Guide for Health Professionals. Cambridge University Press, UK.
Lynch, A.J., I.G. Cowx, E. Fluet-Chouinard, S.M. Glaser, S.C. Phang, T.D. Beard, Jr., S.D. Bower, J.L. Brooks, D.B. Bunnell, J.E. Claussen, S.J. Cooke, Y.-C. Kao, K. Lorenzen, B.J.E. Myers, A.J. Reid, J.J. Taylor and S. Youn. 2017. Inland fisheries – invisible but integral to the UN Sustainable Development Agenda for ending poverty by 2030. Global Environmental Change. 47: 167-173.
Song, A.M., Bower, S.D., Onyango, P., Cooke, S.J., Chuenpagdee, R. 2017. Inter-Sectoral Governance of Inland Fisheries: Research Needs and Foci. Pages 1 to 17 in Inter-sectoral governance of inland fisheries. TBTI Publication Series, E-01/2017. Too Big To Ignore-WorldFish. St John’s, Canada.
Prystay, T.S., E.J. Eliason, M.J. Lawrence, M. Dick, J.W. Brownscombe, D.A. Patterson, G.T. Crossin, S.G. Hinch, and S.J. Cooke. 2017. The influence of water temperature on sockeye salmon heart rate recovery following simulated fisheries interactions. Conservation Physiology. 5(1); doi:10.1093/ conphys/cox050..
Algera, D.A., J.W. Brownscombe, K.M. Gilmour, M.J. Lawrence, A.J. Zolderdo and S.J. Cooke. 2017. Cortisol treatment affects locomotor activity and swimming behaviour of male smallmouth bass engaged in paternal care: A field study using acceleration biologgers. Physiology and Behavior. 181:59-68.
Elmer, L. K., Kelly, L., Rivest, S., Steell, C. Twardek, W., Danylchuk, A. J., Arlinghaus, R., Bennett, J. R., Cooke, S. J. 2017. Angling into the future: Ten commandments for recreational fisheries science, management, and stewardship in a good Anthropocene. Environmental Management 60:165-175.
Cooke, S.J., S. Johansson, K. Andersson, B. Livoreil, G. Post, R. Richards, R. Stewart and A.S. Pullin. 2017. Better evidence, better decisions, better environment: Emergent themes from the first environmental evidence conference. Environmental Evidence. 6:15. https://doi.org/10.1186/s13750-017-0092-0
Birnie-Gauvin, K., S. Walton, C.A. Delle Palme, B.A. Manouchehri, S. Venne, R.J. Lennox, J.M. Chapman, J.R. Bennett and S.J. Cooke. 2017. Conservation physiology can inform threat assessment and recovery planning processes for threatened species. Endangered Species Research. 32:507-513.
Nguyen V.M., Brooks, J.L., Young, N., Lennox, R., Haddaway, N., Whoriskey, F., Harcourt, R., Cooke, S.J. 2017. To share or not to share in the emerging era of big data: Perspectives from fish telemetry researchers on data sharing. Canadian Journal of Fisheries and Aquatic Sciences. 74:1260-1274.
Twardek, W.M., R.J. Lennox, M.J. Lawrence, J. Monaghan Logan, P. Szekeres, A.J. Danylchuk and S.J. Cooke. 2017. Survival of Walleye released following ice-angling on Lake Nipissing. A report submitted to the Ontario Ministry of Natural Resources and Forestry. FECPL Report 03-2017, Carleton University, Ottawa, Canada. 29pp
Rytwinski T, Taylor JJ, Bennett JR, Smokorowski, KE, Cooke SJ. 2017. What are the impacts of flow regime changes on fish productivity in temperate regions? A systematic map protocol. Environmental Evidence. 6:13. DOI 10.1186/s13750-017-0093-z
Paukert, C.P., A.J. Lynch, T.D. Beard, Y. Chen, S.J. Cooke, M.S. Cooperman, I.G. Cowx, L. Ibengwe, D.M. Infante, B.J.E. Myers, N. Phú Hòa, and I.J. Winfield. 2017. Designing a global assessment of climate change on inland fishes and fisheries: knowns and needs. Reviews in Fish Biology and Fisheries. DOI 10.1007/s11160-017-9477-y
Cooke, E.L.L., A.D.M. Wilson, C.K. Elvidge and S.J. Cooke. 2017. Does capture method or the presence of aquatic protected areas influence the selective harvest of behavioural types in largemouth bass? Canadian Journal of Fisheries and Aquatic Sciences. 00:000-000 dx.doi.org/10.1139/cjfas-2016-0192
Patterson, D.A., Robinson, K.A., Lennox, R.J., Nettles, T.L., Donaldson, L.A., Eliason, E.J., Raby, G.D., Chapman, J.M., Cook, K.V., Donaldson, M.R., Bass, A.L., Drenner, S.M., Reid, A.J., Cooke, S.J., and Hinch, S.G. 2017. Review and Evaluation of Fishing-Related Incidental Mortality for Pacific Salmon. DFO Can. Sci. Advis. Sec. Res. Doc. 2017/010. ix + 155 p
Ward, T.D., J.W. Brownscombe, L.F.G. Gutowsky, R. Ballagh, N. Sakich, D. McLean, G. Quesnel, S. Gambhir, C.M. O’Connor and S.J. Cooke. 2017. Electric fish handling gloves provide effective immobilization and do not impede reflex recovery of adult Largemouth Bass. North American Journal of Fisheries Management. 37: 652-659.
Birnie-Gauvin, K., K.S. Peiman, M.H. Larsen, K. Aarestrup, W.G. Willmore and S.J. Cooke. 2017. Short-term and long-term effects of transient exogenous cortisol manipulation on oxidative stress in juvenile brown trout. Journal of Experimental Biology. 220: 1693-1700.
Lennox RJ, Cooke SJ, Davis CR, Gargan P, Hawkins LA, Havn TB, Johansen MR, Kennedy R, Richard A, Svenning M-A, Uglem I, Webb J, Whoriskey FG, Thorstad EB. 2017. Pan-Holarctic assessment of post-release mortality of angled Atlantic salmon Salmo salar. Biological Conservation 209: 150-158
Struthers, D.P., L.F.G. Gutowsky, E. Enders, K. Smokorowski, D. Watkinson, E. Bibeau and S.J. Cooke. 2017. Evaluating riverine hydrokinetic turbine operations relative to the spatial ecology of wild fishes. Journal of Ecohydraulics. 2:53-67.
Costa, M.J., R.J. Lennox, C. Katopodis and S.J. Cooke. 2017. Is there evidence for flow variability as an organism level stressor in fluvial fish? Journal of Ecohydraulics. 2:68-83.
Messmer, V., M.S. Pratchett, A.S. Hoey, A.J. Tobin, D.J. Coker, S.J. Cooke and T.D. Clark. 2017. Global warming will disproportionately affect larger adults in a predatory coral reef fish. Global Change Biology. 23: 2230–2240.
Twardek, W.M., A.D. Shultz, J.E. Claussen, S.J. Cooke, J.A. Stein, J.B. Koppelman, F.J.S. Phelan and D.P. Philipp. 2017. Potential consequences of angling on nest-site fidelity in largemouth bass. Environmental Biology of Fishes. 100: 611-617.
Hammerschlag, N., C. Meyer, M. Grace, S. Kessell, T. Sutton, E.S. Harvey, C. Paris, D.W. Kerstetter and S.J. Cooke. 2017. Shining a light on fish at night: An overview of patterns and processes operating in fish and fisheries at night and in the perpetual darkness of deep and polar seas. Bulletin of Marine Science. 93:253-284.
Belanger, C.B., Peiman, K.S., Vera-Chang, M.N., Moon, T.W., and Cooke, S.J. 2017. Pumpkinseed sunfish (Lepomis gibbosus) from littoral and limnetic habitats differ in stress responsiveness independent of environmental complexity and presence of conspecifics. Canadian Journal of Zoology 95: 193-202.
Prystay, T.S., C.K. Elvidge, W.M Twardek, J.M. Logan, C.H. Reid, S.H. Clarke, J.G. Foster, E.L.L. Cooke and S.J. Cooke. 2017. Comparison of the behavioural consequences and recovery patterns of largemouth bass exposed to MS-222 or electrosedation. Transactions of the American Fisheries Society. 146:556–566.
Brownscombe J.W., A.J. Reid, L. Dolgova, R. Pusiak, B. Laurich, E.D. Turenne, A. Zolderdo, A. Moraga, K. Birnie-Gauvin, J. Brooks, B. Sullivan, M. Ford, S.D. Bower, P. Szekeres, J.R. Bennett, S.J. Cooke. Aquatic Conservation. In Oxford Bibliographies in Ecology. Ed. David Gibson. New York: Oxford University Press
Teffer, A.K., S.G. Hinch, K.M. Miller, D.A. Patterson, A.P. Farrell, S.J. Cooke, A.L. Bass, P. Szekeres and F. Juanes. 2017. Capture severity, infectious disease processes and sex influence post-release mortality of sockeye salmon bycatch. Conservation Physiology. 10.1093/conphys/cox017
Lynch, A. J., S.J. Cooke, T. D. Beard, Jr., Y.-C. Kao, K. Lorenzen, A. M. Song, M. S. Allen, Z. Basher, D. B. Bunnell, E. V. Camp, I. G. Cowx, J. A. Freedman, V. M. Nguyen, J. K. Nohner, M. W. Rogers, Z. A. Siders, W. W. Taylor, and S-J. Youn. 2017. Grand challenges in the management and conservation of North American inland fish and fisheries. Fisheries. 42:2, 115-124.
Burnett, N.J., S.G. Hinch, N.N. Bett, D.C. Braun, M.T. Casselman, S.J. Cooke, A. Gelchu, S. Lingard, C.T. Middleton, V. Minke-Martin, and C.F.H. White. 2017. Reducing carryover effects on migration and spawning success of salmon through a management experiment of dam flows. River Research and Applications. 33:3-15.
Brownscombe, J.W., T.P. Parma, J. Almeida, E. Giesbrecht. J. Batson, X. Chen, S. Wesch, T.D. Ward, C. O’Connor, and S.J. Cooke. 2017. The efficacy of assisted ventilation techniques for facilitating the recovery of fish that are exhausted from simulated angling stress. Fisheries Research.
Bower, S.D., A.J. Danylchuk, R. Raghavan, S. Clark Danylchuk, A.C. Pinder, A.M. Alter, and S.J. Cooke. 2017. Involving recreational fisheries stakeholders in development of research and conservation priorities for mahseer (Tor spp.) of India through collaborative workshops. Fisheries Research. 186:665-681.
Bower, S.D., Raghavan, R., Mahesh, N., Danylchuk A.J., Cooke, S.J. Inter-sectoral fisheries governance issues and solutions on the Cauvery River, India. In: A.M. Song, S.D. Bower, P. Onyango, S.J. Cooke, R. Chuenpagdee (Eds.), Inter-Sectoral Governance of Inland Fisheries. TBTI Publication Series, St John’s, NL, Canada.
Algera, D.A., L.F.G. Gutowsky, A.J. Zolderdo and S.J. Cooke. 2017. Parental Care in a Stressful World: Experimentally Elevated Cortisol and Brood Size Manipulation Influence Nest Success Probability and Nest-Tending Behavior in a Wild Teleost Fish Physiological and Biochemical Zoology. 90(1):85–95.
Magel, J.M.T., N. Pleizier, A.D.M. Wilson, A.D. Shultz, M.N. Vera-Chang, T.W. Moon and S.J. Cooke. 2017. Do physical habitat complexity and predator cues influence the baseline and stress-induced glucocorticoid levels of a mangrove-associated fish? Comparative Biochemistry and Physiology A. 203:281-287.
Bouyoucos, I.A., D.W. Montgomery, J.W. Brownscombe, S.J. Cooke, C.D. Suski, J.W. Mandelman and E.J. Brooks. 2017. Swimming speeds and metabolic rates of semi-captive juvenile lemon sharks (Negaprion brevirostris, Poey) estimated with acceleration biologgers. Journal of Experimental Marine Biology and Ecology. 486:245-254.
Kerr SM, Ward TD, Lennox RJ, Brownscombe JW, Chapman JM, Gutowsky LFG, Logan JM, Twardek WM, Elvidge CK, Danylchuk AJ, Cooke SJ. 2017. Influence of hook type and live bait on the hooking performance of inline spinners in the context of catch-and-release brook trout Salvelinus fontinalis fishing in lakes. Fisheries Research 186:642-647.
McLean, M.F., Hanson, K.C., Cooke, S,J., Hinch, S.G., Patterson, D.A., Nettles, T.L., Litvak, M.K., Crossin, G.T. 2016. Physiological stress response, reflex impairment, and delayed mortality of white sturgeon Acipenser transmontanus exposed to simulated fisheries stressors. Conservation Physiology 4: cow031
Eales, J., N.R. Haddaway, C. Bernes, S.J. Cooke, B.G. Jonsson, J. Kouki, and G. Petrokofsky. 2016. What is the effect of prescribed burning in temperate and boreal forest on biodiversity, beyond tree regeneration, pyrophilous and saproxylic species? A systematic review protocol. Environmental Evidence. 05:24.
Foster, J.G., D.A. Algera, J.W. Brownscombe, A.J. Zolderdo and S.J. Cooke. 2016. Consequences of different types of littoral zone light pollution on the parental care behaviour of a freshwater teleost fish. Water, Air, and Soil Pollution. 227: 404. doi:10.1007/s11270-016-3106-6
Young, N., M. Corriveau, V.M. Nguyen, S.J. Cooke and S.G. Hinch. 2016. How do potential knowledge users evaluate new claims about a contested resource? Problems of power and politics in knowledge exchange and mobilization. Journal of Environmental Management. 184: 380-388.
McKenzie, D.J., M. Axelsson, D. Chabot, G. Claireaux, S.J. Cooke, R.A. Corner, G. De Boeck, P. Domenici, P.M. Guerreiro, B. Hamer, C. Jørgensen, S.S. Killen, S. Lefevre, S. Marras, B. Michaelidis, G.E. Nilsson, M.A. Peck, A. Perez-Ruzafa, A.D. Rijnsdorp, H.A. Shiels, J.F. Steffensen, J.C. Svendsen, M.B.S. Svendsen, L.R. Teal, J. van der Meer, T. Wang, J.M. Wilson, R.W. Wilson and J.D. Metcalfe. 2016. Conservation physiology of marine fishes: State of the art and prospects for policy. Conservation Physiology. 4:1-20.
Key, B., R. Arlinghaus, H.I. Browman, S.J. Cooke, I.G. Cowx, B.K. Diggles, J.D. Rose, W. Sawynok, A. Schwab, A.B. Skiftesvik, E.D. Stevens and C.A. Watson. 2016. Problems with equating thermal preference with “emotional fever” and sentience. Comment on Rey et al. (2015) Fish can show emotional fever: stress-induced hyperthermia in zebrafish. Proceedings of the Royal Society of London B. 00:000-000.
Peat, T.B., L.F.G. Gutowsky, S.E. Doka, J.D. Midwood, N.W.R. Lapointe, B. Hlevca, M.G. Wells, R. Portiss and S.J. Cooke. 2016. Comparative Thermal Biology and Depth Distribution of Northern Pike and Largemouth Bass in an Urban Harbour of the Laurentian Great Lakes. Canadian Journal of Zoology. 94:767-776.
Cooke, S.J., E.H. Allison, T.D. Beard, R. Arlinghaus, A.H. Arthington, D.M. Bartley, I.G. Cowx, C. Fuentevilla, N. J. Leonard, K. Lorenzen, A.J. Lynch, V.M. Nguyen, S.-J. Youn, W.W. Taylor and R.L. Welcomme. 2016. On the sustainability of inland fisheries: Finding a future for the forgotten. Ambio. 45:753-764.
Taylor, J.J., N.M. Sopinka, S.M. Wilson, S.G. Hinch, D.A. Patterson, S.J. Cooke and W.G. Willmore. 2016. Examining the relationships between egg cortisol and oxidative stress in developing wild sockeye salmon (Oncorhynchus nerka). Comparative Biochemistry and Physiology A. 200:87-93.
Bower, S.D., A.J. Danylchuk, R. Raghavan, S. Clark-Danylchuk, A. Pinder, and S.J. Cooke. 2016. Rapid assessment of the physiological impacts caused by catch-and-release angling on blue-finned mahseer (Tor sp.) of the Cauvery River, India. Fisheries Management and Ecology 23:208-217.
Patterson, D.A., S.J. Cooke, S.G. Hinch, K.A. Robinson, N. Young, A.P. Farrell and K.M. Miller. 2016. A perspective on physiological studies supporting the provision of scientific advice for the management of Fraser River sockeye salmon (Oncorhynchus nerka). Conservation Physiology. 4:1
Cooke, S.J. D.M. Bartley, T.D. Beard, I.G. Cowx, C. Goddard, C. Fuentevilla, N. Leonard, A.J. Lynch, K. Lorenzen and W.W. Taylor. 2016. From Ideas to Action: Ten Steps to Responsible Inland Fisheries that Support Livelihoods, Food Security, and Healthy Aquatic Ecosystems. Pages 343-351 in C. Goddard, N. Leonard, W.W. Taylor and D. Bartley, Eds. Freshwater, Fish, and the Future: Proceedings of the Global Cross-Sectoral Conference. American Fisheries Society, Bethesda, MD.
Beard T. D., E. H. Allison, D.M. Bartley, I.G. Cowx, , S. J. Cooke, C. Fuentevilla, A.J. Lynch, and W.W. Taylor. 2016. Inland fish and fisheries: A call to action. Pages 1-6 in C. Goddard, N. Leonard, W.W. Taylor and D. Bartley, Eds. Freshwater, Fish, and the Future: Proceedings of the Global Cross-Sectoral Conference. American Fisheries Society, Bethesda, MD.
Cooke, S.J., A.H. Arthington, S.A. Bonar, S.D. Bower, D.B. Bunnell, R.E.M. Entsua-Mensah, S. Funge-Smith, J.D. Koehn, N.P. Lester, K. Lorenzen, S. Nam, R.G. Randall, P. Venturelli and I.G. Cowx. 2016. Assessment of inland fisheries: A vision for the future. Pages 45-62 in C. Goddard, N. Leonard, W.W. Taylor and D. Bartley, Eds. Freshwater, Fish, and the Future: Proceedings of the Global Cross-Sectoral Conference. American Fisheries Society, Bethesda, MD.
Lorenzen, K., I.G. Cowx, R.E.M. Entsua-Mensah, N.P. Lester, J.D. Koehn, R.G. Randall, S. Nam, S.A. Bonar, D.B. Bunnell, P. Venutrelli, S.D. Bower and S.J. Cooke. 2016. Stock assessment in inland fisheries: a foundation for sustainable use and conservation. Reviews in Fish Biology and Fisheries. 26:405–440.
Gupta, N., S.D. Bower, S.J. Cooke, A.J. Danylchuk and R. Raghavan. 2016. Practices and attitudes of Indian catch-and-release anglers: identifying opportunities for advancing the management of recreational fisheries. Journal of Threatened Taxa. 8(4): 8659–8665.
Arlinghaus, R., S.J. Cooke, S.G. Sutton, A.J. Danylchuk, K. De. M. F. Freire, J. Alos, E.T. Da Silva, I.G. Cowx and R. Van Anrooy. 2016. Recommendations for the future of recreational fisheries to prepare the social-ecological system for coping with change. Fisheries Management and Ecology.23; 177–186
Hughes, R.M., C. B. M. Alves, F. Amezcua, J. Claussen, S. J. Cooke, I. G. Cowx, K. D. Fausch, M. T. Ferreira, W. G. Franzin, D. Hall, M. O. Ipinmoroti, R. Ligeiro, N. Mercado-Silva, M. Miller, P. S. Pompeu, D. C. Schmidt, L. G. M. Silva and B. F. Terra. 2016. Preparing for international research and teaching. Fisheries. 41:464-465.
Cooke, S.J., E.G. Martins, D.P. Struthers, L.F.G. Gutowsky, M. Power, S.E. Doka, J.M. Dettmers, D.A. Crook, M.C. Lucas, C.M. Holbrook and C.C. Krueger. 2016. A moving target – incorporating knowledge of the spatial ecology of fish into the assessment and management of freshwater fish populations. Environmental Monitoring and Assessment. 188:Article #239.
Lennox R.J., S.J. Cooke, O.H. Diserud, T.B. Havn, M. Rognli, M. Johansen, E.B. Thorstad, F.G. Whoriskey and I. Uglem. 2016. Use of simulation approaches to evaluate the consequences of catch-and-release angling on the migration behaviour of adult Atlantic salmon (Salmo salar). Ecological Modeling. 333: 43-50.
Zolderdo, A.J., D.A. Algera, M.J. Lawrence, K.M. Gilmour, M.D. Fast, J. Thuswaldner, W. Willmore and S.J. Cooke. 2016. Stress, nutrition and parental care in a teleost fish: Exploring mechanisms with supplemental feeding and cortisol manipulation. Journal of Experimental Biology. 219: 1237-1248.
Lynch, A. J., S. J. Cooke, A. Deines, S. Bower, D. B, Bunnell, I. G. Cowx, V. M. Nguyen, J. Nonher, K. Phouthavong, B. Riley, M. W. Rogers, W.W. Taylor, W.M. Woelmer, S. Youn and T. D. Beard, Jr. 2016. The social, economic, and ecological importance of inland fishes and fisheries. Environmental Reviews. 24: 115-121.
Lennox, R.J., I. Mayer, T.B. Havn, M.R. Johansen, K. Whoriskey, S.J. Cooke, E.B. Thorstad and I. Uglem. 2016. Consequences of recreational angling and air exposure on the physiological status and reflex impairment of European grayling (Thymallus thymallus). Boreal Environment Research. 21: 461–470.
Clark, T.D., N.B. Furey, E.L. Rechisky, M.K. Gale, K.M. Jeffries, A.D. Porter, M.T. Casselman, A.G. Lotto, D.A. Patterson, S.J. Cooke, A.P. Farrell, D.W. Welch and S.G. Hinch. 2016. Tracking wild sockeye salmon smolts to the ocean reveals distinct regions of nocturnal movement and high mortality. Ecological Applications. 26: 959–978.
Gutowsky, L.F.G., Harrison, P.M., Silva, A., Martins, E.G., Power, M., Zhu, D.Z., Cooke, S.J. 2016. Upstream passage and entrainment of fish at hydropower dams: lessons learned from NSERC’s HydroNet 2010-2015. DFO Can. Sci. Advis. Sec. Res. Doc. 2016/039. vii + 35 p
Ward, T.D., D.A. Algera, A.J. Gallagher, E. Hawkins, A. Horodysky, C. Jørgensen, S.S. Killen, D.J. McKenzie, J.D. Metcalfe, M.A. Peck, M. Vu, and S.J. Cooke. 2016. Understanding the Individual to Implement the Ecosystem Approach to Fisheries Management. Conservation Physiology. 4(1):cow005. doi:10.1093/conphys/cow005
Cooke, S.J., V.M. Nguyen, J.M. Dettmers, R. Arlinghaus, M.C. Quist, D. Tweddle, O.L.F. Weyl, R. Raghavan, M. Portocarrero-Aya, E. Agudelo Cordoba, and I.G. Cows. 2016. Sustainable inland fisheries – Perspectives from the recreational, commercial and subsistence sectors from around the globe. Pages 467-505 in G.P. Closs, M. Krkosek and J.D. Olden, Eds. Conservation of Freshwater Fishes. Cambridge University Press, Cambridge.
Stevens, E.D., R. Arlinghaus, H. Browman, S.J. Cooke, I.G. Cowx, B.K. Diggles, B. Key, J.D. Rose, W. Sawynok, A. Schwab, A.B. Skiftesvik, C.A. Watson and C.D.L. Wynne. 2016. Stress is not pain. Comment on Elwood and Adams (2015) Electric shock causes physiological stress responses in shore crabs, consistent with prediction of pain. Biology Letters. 12:20151006. doi:10.1098/rsbl.2015.1006.
Crawford, C., J.D. Midwood, R.J. Lennox, S. Bliss, C. Belanger and S.J. Cooke. In Press. Experimental displacement of longnose dace, Rhinichthys cataractae (Actinopterygii, Cyprinidae), reveals rapid fish avoidance of a stormwater drain in an urban watershed. Hydrobiologia. 767:197-206.
Cooke, S.J., V.M. Nguyen, A.D.M. Wilson, M.R. Donaldson, A. Gallagher, N. Hammerschlag and N.R. Haddaway. 2016. The need for speed in a crisis discipline: perspectives on peer review duration and implications for conservation science. Endangered Species Research. 30:11-18. doi: 10.3354/esr00721
Cooke, S.J., A.D.M. Wilson, C.K. Elvidge, R.J. Lennox, N. Jepsen, A.H. Colotelo and R.S. Brown. 2016. Ten practical realities for Institutional Animal Care and Use Committees when evaluating protocols dealing with fish in the field. Reviews in Fish Biology and Fisheries. 26: 123-133.
Bower, S.D., A.J. Danylchuk, J.W. Brownscombe, J.D Thiem, and S.J. Cooke. 2016. Evaluating consequences of catch-and-release angling on the physiological status of peacock bass (Cichla ocellaris) in Puerto Rico: A rapid assessment approach. Fisheries Research. 175:95-102. dx.doi.org/10.1016/j.fishres.2015.11.014
Belanger, C.B., M.N. Vera-Chang, T.W. Moon, J.D. Midwood, C.D. Suski and S.J. Cooke. 2016. Seasonal variation in baseline and maximum whole-body glucocorticoid concentrations in a small-bodied stream fish independent of habitat quality. Comparative Biochemistry and Physiology A. 192:1-6. dx.doi.org/10.1016/j.cbpa.2015.10.027.
Gutowsky, L.F.G., P.M. Harrison, E.G. Martins, A. Leake, D.A. Patterson, M. Power and S.J. Cooke. 2015. Interactive effects of sex and body size on adfluvial bull trout (Salvelinus confluentus) movement ecology. Canadian Journal of Zoology. 94:31-40. dx.doi.org/10.1139/cjz-2015-0104.
Murchie, K.J., S. Clark Danylchuk, A.J. Danylchuk, and S.J. Cooke. 2015. Fish community and habitat assessments of three adjacent tidal creeks on Cape Eleuthera, The Bahamas. Pages 67-80 in K.J. Murchie and P.P. Daneshgar (Eds.), Proceedings of the Second International Symposium on Mangroves as Fish Habitat. Mazatlán, Mexico. American Fisheries Society, Bethesda, Maryland.
Midwood, J.D., J.M. Chapman, M. Cvetkovic, G.D. King, T.D. Ward, S.J. Cooke, and C.D. Suski. 2015. Diel variability in fish assemblage in coastal wetlands and tributaries of the St. Lawrence River: A cautionary tale for fisheries monitoring. Aquatic Sciences. DOI:10.1007/s00027-015-0422-7.
Nowell, L.B., J.W. Brownscombe, L.F.G. Gutowsky, K.J. Murchie, C.D. Suski, A.J. Danylchuk, A. Shultz and S.J. Cooke. 2015. Swimming energetics and thermal ecology of adult bonefish (Albula vulpes): A combined laboratory and field study in Eleuthera, The Bahamas. Environmental Biology of Fishes 98:2133-2146.
Murchie, K.J., A.D. Shultz, J.A. Stein, S.J. Cooke, J. Lewis, J. Franklin, G. Vincent, E.J. Brooks, J.E. Claussen and D.P. Philipp. 2015. Defining adult bonefish (Albula vulpes) movement corridors around Grand Bahama in the Bahamian Archipelago. Environmental Biology of Fishes. 98:2203-2212.
Peat, T. B., T. A. Hayden, L. F. G. Gutowsky, C. S. Vandergoot, D. G. Fielder, C. P. Madenjian, K. J. Murchie, J. M. Dettmers, C. C. Krueger, and S. J. Cooke. 2015. Seasonal thermal ecology of adult walleye (Sander vitreus) in Lake Huron and Lake Erie. Journal of Thermal Biology. 53:98-106.
Drenner, S.M., S.G. Hinch. E.G. Martins, N. Furey, T.D. Clarke, S.J.Cooke, D. Patterson, D. Robichaud, D.W. Welch. A.P. Farrell and R. Thomson. 2015. Environmental conditions and physiological state influence estuarine movements of homing sockeye salmon. Fisheries Oceanography. 24: 307–324.
Raby, G.D., M.R. Donaldson, S.G. Hinch, T.D. Clark, E.J. Eliason, K.M. Jeffries, K.V. Cook, A. Teffer, A.L. Bass, K.M. Miller, D.A. Patterson, A.P. Farrell and S.J. Cooke. 2015. Fishing for effective conservation: context and biotic variation are keys to understanding the survival of Pacific salmon after catch-and-release. Integrative and Comparative Biology. 55: 554-576.
Pleizier, N., A.D.M. Wilson, A.D. Shultz and S.J. Cooke. 2015. Puffed and bothered: personality, performance, and the effects of stress on checkered pufferfish. Physiology and Behavior. 152: 68-78.
Philipp, D.P., J.E. Claussen, J.B. Koppelman, J.A. Stein, S.J. Cooke, C.D. Suski, D.H. Wahl, D.A.H. Sutter, and R. Arlinghaus. 2015. Fisheries-induced evolution in largemouth bass – linking vulnerability to angling, parental care, and fitness. American Fisheries Society Symposium. 82:223–234.
Chapman, J.M., D. Algera, M. Dick, E.E. Hawkins, M.J. Lawrence, R.J. Lennox, A.M. Rous, C.M. Souliere, H.L.J. Stemberger, D.P. Struthers, M. Vu, T.D. Ward, A.J. Zolderdo and S.J. Cooke. 2015. Being relevant: Practical guidance for early career researchers interested in solving conservation problems. Global Ecology and Conservation. 4: 334-348.
Thiem, J.D., J.W. Dawson, A.C. Gleiss, E.G. Martins, A. Haro, T. Castro-Santos, A.J. Danylchuk, R.P. Wilson and S.J. Cooke. 2015. Accelerometer-derived activity correlates with volitional swimming speed in lake sturgeon (Acipenser fulvescens). Canadian Journal of Zoology. 93:645-654.
Philipp, D.P., J.E. Claussen, J.B. Koppelman, J.A. Stein, S.J. Cooke, C.D. Suski, D.H. Wahl, D.A. Sutter, R. Arlinghaus. 2015. Fisheries-Induced Evolution in Largemouth Bass: Linking Vulnerability to Angling, Parental Care, and Fitness. American Fisheries Society Symposium 82: 223-234.
Hussey, N.E., S.T. Kessel, K. Aarestrup, S.J. Cooke, P.D. Cowley, A.T. Fisk, R.G. Harcourt, K.N. Holland, S.J. Iverson, J.F. Kocik, J.E. Mills Flemming and F.G. Whoriskey. In Press. Aquatic animal telemetry: a panoramic window into the underwater world. Science DOI: 10.1126/science.1255642
Robinson, K.A., S.G. Hinch, G.D. Raby, M.R. Donaldson, D. Robichaud, D.A. Patterson, and S.J. Cooke. 2015. Influence of post-capture ventilation assistance on migration success of adult sockeye salmon following capture and release. Transactions of the American Fisheries Society 144: 693-704.
Raby, G.D., T.D. Clark, A.P. Farrell, D.A. Patterson, N.N. Bett, S.M. Wilson, W.G. Willmore, Cory D. Suski, S.G. Hinch and S.J. Cooke. 2015. Facing the river gauntlet: understanding the effects of fisheries capture and water temperature on the physiology of coho salmon. PLoS One 10:e0124023.
Raby, G.D., S.M. Wilson, D.A. Patterson, S.G. Hinch, T.D. Clark, A.P. Farrell, and S.J. Cooke. 2015. A physiological comparison of three techniques for reviving sockeye salmon exposed to a severe capture stressor during upriver migration. Conservation Physiology doi:10.1093/conphys/cov015
Binder, T.R., C.M. O’Connor, S.H. McConnachie, S.M. Wilson, M.A. Nannini, D.H. Wahl and S.J. Cooke. 2015. Is winter worse for stressed fish? The consequences of exogenous cortisol manipulation on over-winter survival and condition of juvenile largemouth bass. Comparative Biochemistry and Physiology A 187: 97-102.
Lennox, R. J., Uglem, I., Cooke, S. J., Næsje, T., Whoriskey, F. G., Havn, T. B., Ulvan, E. M., Solem, Ø., Thorstad, E. B. 2015. Does catch-and-release angling alter the behavior and fate of adult Altantic Salmon during upriver migration? Transactions of the American Fisheries Society. 144:2, 400-409.
Cull, F., C.M. O’Connor, C.D. Suski, A.D. Shultz, A.J. Danylchuk and S.J. Cooke. 2015. Puff and bite: The relationship between the glucocorticoid stress response and anti-predator performance in checkered puffer (Sphoeroides testudineus). General and Comparative Endocrinology 214:1-8.
Cull, F., C.D. Suski, A. Shultz, A.J. Danylchuk, C.M. O’Connor, K.J. Murchie and S.J. Cooke. 2015. Consequences of experimental cortisol manipulations on the thermal biology of the checkered puffer (Sphoeroides testudineus) in laboratory and field environments. Journal of Thermal Biology 47:63-74.
Brownscombe, J.W., K. Marchand, K. Tisshaw, V. Fewster, O. Groff, M. Pichette, M. Seed, L.F.G. Gutowsky, A.D.M. Wilson and S.J. Cooke. 2014. The influence of water temperature and accelerometer-determined fight intensity on physiological stress and reflex impairment of angled largemouth bass. Conservation Physiology DOI: 10.1093/conphys/cou057
Cooke, S.J., R. Arlinghaus, D. M. Bartley, T.D. Beard, I.G. Cowx, T.E. Essington, O.P. Jensen, A. Lynch, W.W. Taylor, and R. Watson. 2014. Where the waters meet: Sharing ideas and experiences between inland and marine realms to promote sustainable fisheries management. Canadian Journal of Fisheries and Aquatic Sciences 71: 1593-1601. (Invited paper arising from S. Cooke’s J.C. Stevenson Lectureship at CCFFR in Windsor in 2013)
Martins, E.G., L.F.G. Gutowsky, P.M Harrison, J.E. Mills Flemming, I.D. Jonsen, D.Z. Zhu, A. Leake, D.A. Patterson, M. Power and S.J. Cooke. 2014. Behavioral attributes of turbine entrainment risk for adult resident fish revealed by acoustic telemetry and state-space modeling. Journal of Animal Biotelemetry 2: 13.
Miller, K.M., A. Teffer, S. Tucker, S. Li, A.D. Schulze, M. Trudel, F. Juanes, A. Tabata, K.H. Kaukinen, N.G. Ginther, T.J. Ming, S.J. Cooke, M. Hipfner, D.A. Patterson, and S.G. Hinch. 2014. Infectious disease, shifting climates and opportunistic predators: cumulative factors potentially impacting wild salmon declines. Evolutionary Applications 7: 812-855.
Bower, S.D., Nguyen, V.M., Danylchuk, A.J., Beard Jr., T.D., and S.J. Cooke. 2014. Inter-sectoral conflict and recreational fisheries of the developing world: Opportunities and challenges for co-operation. In: McConney, P., R. Medeiros and M. Pena. Eds. 2014. Enhancing Stewardship in Small-Scale Fisheries: Practices and Perspectives. Too Big To Ignore (TBTI) and Centre for Resource Management and Environmental Studies, The University of the West Indies, Cave Hill Campus, Barbados. CERMES Technical Report No. 73.
Taylor, M.K., C.T. Hasler, S.G. Hinch, B. Lewis, D.C. Schmidt and S.J. Cooke. 2014. Reach-scale movements of bull trout (Salvelinus confluentus) relative to hydropeaking operations in the Columbia River, Canada. Ecohydrology 7: 1079-1086.
Donaldson, M.R., S.G. Hinch, K.M. Jeffries, D.A. Patterson, S.J. Cooke, A.P. Farrell, and K.M. Miller. 2014. Species- and sex-specific responses and recovery of wild, mature Pacific salmon to an exhaustive exercise and air-exposure stressor. Comparative Biochemistry and Physiology A 173: 16-23.
Jepsen, N., K. Aarestrup and S.J. Cooke. 2014. Tagging fish in the field: ethical and procedural considerations. A comment on the recent paper of D. Mulcahy; Legal, ethical and procedural bases for the use of aseptic techniques to implant electronic devices. Journal of Fish and Wildlife Management 4: 211-219.